BLASTX nr result

ID: Ophiopogon27_contig00041416 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00041416
         (738 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKK67049.1| hypothetical protein RhiirC2_752444 [Rhizophagus ...    87   1e-17

>gb|PKK67049.1| hypothetical protein RhiirC2_752444 [Rhizophagus irregularis]
          Length = 145

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
 Frame = -1

Query: 660 LERLKQGVKPYKSFESDYTWLTKEHGSPYEKFYDHTFAAEFKKDDFDKWVDENFTDSDIS 481
           ++++K+ VK YK++E D+ W++K+  +P   F   TF    K  DFD WVD+ F + D  
Sbjct: 6   VKKIKEEVKDYKNYECDFKWVSKK-SNPKTDFTSATFKG--KTGDFDAWVDKTFPNHD-- 60

Query: 480 DSAKKTLKAMFYVETAFQESTQVEIKDDSVDARLFLCVAKKDGSKLSVGIGIATYKSSGK 301
            S K  +K+M   + +  E   V I+D SVDA+  +    K      VG+G   +  S K
Sbjct: 61  KSLKDLMKSMGLCDESSYEDWNVSIEDGSVDAKYHVVAVVKKDETYYVGVGKTLF--SVK 118

Query: 300 DT-KAISGSGNRVIKALKYHFYDTRG 226
           +T     G+  +V+ ALKYH+YDT+G
Sbjct: 119 NTGDYFLGNDTKVVNALKYHYYDTKG 144


Top