BLASTX nr result

ID: Ophiopogon27_contig00041149 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00041149
         (438 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY42466.1| hypothetical protein RhiirA4_397446 [Rhizophagus ...    46   5e-06

>gb|PKY42466.1| hypothetical protein RhiirA4_397446 [Rhizophagus irregularis]
          Length = 85

 Score = 46.2 bits (108), Expect(2) = 5e-06
 Identities = 24/35 (68%), Positives = 25/35 (71%)
 Frame = -2

Query: 119 FGKKRNVSLYSLYFRLRELLSAFTQTKEY*FLYQP 15
           F   + VSLYSLYFRLRELLSAFTQTK   F   P
Sbjct: 19  FETTQAVSLYSLYFRLRELLSAFTQTKSIDFCINP 53



 Score = 32.0 bits (71), Expect(2) = 5e-06
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 40 KSIDFCINPSDGL 2
          KSIDFCINPSDGL
Sbjct: 45 KSIDFCINPSDGL 57


Top