BLASTX nr result

ID: Ophiopogon27_contig00040934 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00040934
         (415 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC58787.1| hypothetical protein RhiirA1_470471 [Rhizophagus ...    48   3e-06

>gb|PKC58787.1| hypothetical protein RhiirA1_470471 [Rhizophagus irregularis]
 gb|PKY29517.1| hypothetical protein RhiirB3_446173 [Rhizophagus irregularis]
          Length = 130

 Score = 47.8 bits (112), Expect(2) = 3e-06
 Identities = 21/41 (51%), Positives = 32/41 (78%)
 Frame = -3

Query: 161 TSTVIMMNIDGTDIPANFHENLYETLQKLCYIEYESLSAII 39
           TS +++M+ DGTDIP N HE+L++ +++  Y EYES SA+I
Sbjct: 83  TSDMVIMSSDGTDIPINLHEDLHKIIREWYYNEYESPSALI 123



 Score = 30.8 bits (68), Expect(2) = 3e-06
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -1

Query: 283 TKSALGTIVEDLP*AHYMRLSDKCVAVNNL 194
           T+ ALG  ++ LP + Y+R+SDK VA+ +L
Sbjct: 32  TELALGHFIDKLPQSRYIRVSDKYVAICHL 61


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