BLASTX nr result

ID: Ophiopogon27_contig00040063 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00040063
         (391 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020266650.1| antifungal protein ginkbilobin-2-like [Aspar...    60   5e-09
gb|ONK69268.1| uncharacterized protein A4U43_C05F21080 [Asparagu...    60   1e-08

>ref|XP_020266650.1| antifungal protein ginkbilobin-2-like [Asparagus officinalis]
 gb|ONK69269.1| uncharacterized protein A4U43_C05F21090 [Asparagus officinalis]
          Length = 133

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 41/108 (37%), Positives = 58/108 (53%)
 Frame = +1

Query: 64  SMAKIMMTLLFVGALATTVRGGSNDGGVPFFKCGKETYGGALARRFIKNLDEVLIELRRE 243
           ++AK ++  L V  L T     S D    F  C  +T+    A  + +N++ +L EL+  
Sbjct: 3   TLAKAIVVCLIVATLGTFC--ASTDMSFDF-DCTSKTFKHCDA--YGQNVESLLTELKTI 57

Query: 244 TPRDGNFDGEAERTYGASVFGRASCFSSLTTSVDGCTKCLDKAINAVK 387
           TP +GNF   A RT    V+G A CFSSLT+S   CT CL KAI  ++
Sbjct: 58  TPVNGNFYHRANRT-NPRVYGTAHCFSSLTSSEAACTSCLHKAIKTIR 104


>gb|ONK69268.1| uncharacterized protein A4U43_C05F21080 [Asparagus officinalis]
          Length = 133

 Score = 59.7 bits (143), Expect = 1e-08
 Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
 Frame = +1

Query: 64  SMAKIMMTLLFVGAL----ATTVRGGSNDGGVPFFKCGKETYGGALARRFIKNLDEVLIE 231
           ++AK ++  L V  L    A+T      D     FK G + YG        +N++ +L E
Sbjct: 3   ALAKAVVVCLIVATLGSFCASTEMSFDFDCTSKTFKHG-DAYG--------QNVESLLEE 53

Query: 232 LRRETPRDGNFDGEAERTYGASVFGRASCFSSLTTSVDGCTKCLDKAINAVK 387
           L+  TP +G+F   A RTY  SVFG A CFSSLT+S   C  CL KAI  ++
Sbjct: 54  LKTITPVNGHFYHRANRTY-PSVFGTAHCFSSLTSSEAACASCLHKAIKTIR 104


Top