BLASTX nr result

ID: Ophiopogon27_contig00039864 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00039864
         (484 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY17551.1| RNA-binding domain-containing protein [Rhizophagu...    57   2e-07
gb|PKY41172.1| RNA-binding domain-containing protein [Rhizophagu...    57   2e-07
gb|PKC14366.1| RNA-binding domain-containing protein [Rhizophagu...    57   2e-07
dbj|GBC26269.1| glycine-rich RNA-binding protein 2 [Rhizophagus ...    57   1e-06

>gb|PKY17551.1| RNA-binding domain-containing protein [Rhizophagus irregularis]
          Length = 128

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -2

Query: 483 EDAENAIENLNDSEFDGRTIKVDRAAERSPPAP 385
           E+AE AI+NLND+EFDGR IKVDRAAERS PAP
Sbjct: 55  EEAEIAIQNLNDAEFDGRNIKVDRAAERSSPAP 87


>gb|PKY41172.1| RNA-binding domain-containing protein [Rhizophagus irregularis]
          Length = 133

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -2

Query: 483 EDAENAIENLNDSEFDGRTIKVDRAAERSPPAP 385
           E+AE AI+NLND+EFDGR IKVDRAAERS PAP
Sbjct: 55  EEAEIAIQNLNDAEFDGRNIKVDRAAERSSPAP 87


>gb|PKC14366.1| RNA-binding domain-containing protein [Rhizophagus irregularis]
 gb|PKC70041.1| RNA-binding domain-containing protein [Rhizophagus irregularis]
 gb|PKK73911.1| RNA-binding domain-containing protein [Rhizophagus irregularis]
 gb|POG68613.1| hypothetical protein GLOIN_2v1635358 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 134

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -2

Query: 483 EDAENAIENLNDSEFDGRTIKVDRAAERSPPAP 385
           E+AE AI+NLND+EFDGR IKVDRAAERS PAP
Sbjct: 55  EEAEIAIQNLNDAEFDGRNIKVDRAAERSSPAP 87


>dbj|GBC26269.1| glycine-rich RNA-binding protein 2 [Rhizophagus irregularis DAOM
           181602]
          Length = 319

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -2

Query: 483 EDAENAIENLNDSEFDGRTIKVDRAAERSPPAP 385
           E+AE AI+NLND+EFDGR IKVDRAAERS PAP
Sbjct: 240 EEAEIAIQNLNDAEFDGRNIKVDRAAERSSPAP 272


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