BLASTX nr result
ID: Ophiopogon27_contig00039697
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00039697
(528 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKC15430.1| RBP11-like subunits of RNA polymerase [Rhizophagu... 261 3e-87
gb|EXX68146.1| Rpb11p [Rhizophagus irregularis DAOM 197198w] >gi... 261 5e-87
dbj|GBC13333.1| DNA-directed RNA polymerase II subunit RPB11 [Rh... 256 1e-83
gb|POG66697.1| DNA-directed RNA polymerase [Rhizophagus irregula... 179 1e-55
gb|OZJ06604.1| hypothetical protein BZG36_00438 [Bifiguratus ade... 116 5e-30
gb|KFH62754.1| DNA-directed RNA polymerase II subunit J [Mortier... 114 3e-29
ref|XP_003387390.1| PREDICTED: DNA-directed RNA polymerase II su... 112 1e-28
gb|ORX64818.1| RBP11-like subunits of RNA polymerase [Anaeromyce... 110 7e-28
ref|XP_018417218.1| PREDICTED: DNA-directed RNA polymerase II su... 109 1e-27
gb|ORX51807.1| RBP11-like subunits of RNA polymerase [Piromyces ... 109 2e-27
ref|XP_002115874.1| hypothetical protein TRIADDRAFT_59743 [Trich... 108 2e-27
gb|ORY76475.1| RBP11-like subunits of RNA polymerase [Neocallima... 109 3e-27
emb|CDH54308.1| rna polymerase ii core subunit [Lichtheimia cory... 108 5e-27
ref|XP_022917713.1| DNA-directed RNA polymerase II subunit RPB11... 107 5e-27
ref|XP_017554789.1| PREDICTED: DNA-directed RNA polymerase II su... 107 7e-27
gb|ACO09875.1| DNA-directed RNA polymerase II subunit J [Osmerus... 107 7e-27
ref|NP_001019571.1| DNA-directed RNA polymerase II subunit RPB11... 107 7e-27
gb|AAP97076.1| RNA polymerase II subunit [Branchiostoma belcheri] 107 8e-27
ref|XP_015794953.1| PREDICTED: DNA-directed RNA polymerase II su... 107 1e-26
ref|XP_010746817.1| PREDICTED: DNA-directed RNA polymerase II su... 107 1e-26
>gb|PKC15430.1| RBP11-like subunits of RNA polymerase [Rhizophagus irregularis]
Length = 141
Score = 261 bits (667), Expect = 3e-87
Identities = 133/141 (94%), Positives = 133/141 (94%)
Frame = -2
Query: 527 MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT 348
MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT
Sbjct: 1 MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT 60
Query: 347 NETKPEAMVAKALNDLITEVGYLRTKFMEDLGRARALVIPREQKSMVEQEPQVVQGIQQP 168
NETKPEAMVAKALNDLITEVGYLRTKFMEDLGRARALVIPREQKSMVEQEPQVVQGIQQP
Sbjct: 61 NETKPEAMVAKALNDLITEVGYLRTKFMEDLGRARALVIPREQKSMVEQEPQVVQGIQQP 120
Query: 167 TREPVNTSXXXXXXXXVDMDF 105
TREPVNTS VDMDF
Sbjct: 121 TREPVNTSVGGTGGVGVDMDF 141
>gb|EXX68146.1| Rpb11p [Rhizophagus irregularis DAOM 197198w]
gb|PKC71098.1| RBP11-like subunits of RNA polymerase [Rhizophagus irregularis]
gb|PKK78577.1| RBP11-like subunits of RNA polymerase [Rhizophagus irregularis]
gb|PKY30708.1| RBP11-like subunits of RNA polymerase [Rhizophagus irregularis]
gb|PKY51218.1| RBP11-like subunits of RNA polymerase, partial [Rhizophagus
irregularis]
Length = 159
Score = 261 bits (667), Expect = 5e-87
Identities = 133/141 (94%), Positives = 133/141 (94%)
Frame = -2
Query: 527 MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT 348
MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT
Sbjct: 19 MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT 78
Query: 347 NETKPEAMVAKALNDLITEVGYLRTKFMEDLGRARALVIPREQKSMVEQEPQVVQGIQQP 168
NETKPEAMVAKALNDLITEVGYLRTKFMEDLGRARALVIPREQKSMVEQEPQVVQGIQQP
Sbjct: 79 NETKPEAMVAKALNDLITEVGYLRTKFMEDLGRARALVIPREQKSMVEQEPQVVQGIQQP 138
Query: 167 TREPVNTSXXXXXXXXVDMDF 105
TREPVNTS VDMDF
Sbjct: 139 TREPVNTSVGGTGGVGVDMDF 159
>dbj|GBC13333.1| DNA-directed RNA polymerase II subunit RPB11 [Rhizophagus
irregularis DAOM 181602]
Length = 248
Score = 256 bits (653), Expect = 1e-83
Identities = 128/128 (100%), Positives = 128/128 (100%)
Frame = -2
Query: 527 MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT 348
MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT
Sbjct: 19 MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT 78
Query: 347 NETKPEAMVAKALNDLITEVGYLRTKFMEDLGRARALVIPREQKSMVEQEPQVVQGIQQP 168
NETKPEAMVAKALNDLITEVGYLRTKFMEDLGRARALVIPREQKSMVEQEPQVVQGIQQP
Sbjct: 79 NETKPEAMVAKALNDLITEVGYLRTKFMEDLGRARALVIPREQKSMVEQEPQVVQGIQQP 138
Query: 167 TREPVNTS 144
TREPVNTS
Sbjct: 139 TREPVNTS 146
>gb|POG66697.1| DNA-directed RNA polymerase [Rhizophagus irregularis DAOM
181602=DAOM 197198]
Length = 91
Score = 179 bits (454), Expect = 1e-55
Identities = 88/88 (100%), Positives = 88/88 (100%)
Frame = -2
Query: 527 MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT 348
MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT
Sbjct: 1 MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT 60
Query: 347 NETKPEAMVAKALNDLITEVGYLRTKFM 264
NETKPEAMVAKALNDLITEVGYLRTKFM
Sbjct: 61 NETKPEAMVAKALNDLITEVGYLRTKFM 88
>gb|OZJ06604.1| hypothetical protein BZG36_00438 [Bifiguratus adelaidae]
Length = 139
Score = 116 bits (290), Expect = 5e-30
Identities = 53/96 (55%), Positives = 74/96 (77%)
Frame = -2
Query: 527 MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT 348
+ +TPDTK+ NAATF I REDHT+GN++R +LL++P+V+FAGYK+PHPLEHN II+VQT
Sbjct: 19 VSMTPDTKLPNAATFTIEREDHTLGNLLRMQLLKDPRVLFAGYKVPHPLEHNFIIKVQTI 78
Query: 347 NETKPEAMVAKALNDLITEVGYLRTKFMEDLGRARA 240
PE + +A+ +LI E+G L+ KF D+ R +A
Sbjct: 79 PSCSPEIALGEAITELIQEIGTLKNKFEMDVIRQKA 114
>gb|KFH62754.1| DNA-directed RNA polymerase II subunit J [Mortierella verticillata
NRRL 6337]
Length = 136
Score = 114 bits (284), Expect = 3e-29
Identities = 50/96 (52%), Positives = 76/96 (79%)
Frame = -2
Query: 527 MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT 348
+ ITPDTK+ NAATF++ +EDHT+ N++R +LL++P+V+FAGYK+PHPL+H I++VQTT
Sbjct: 19 LTITPDTKIPNAATFKVEKEDHTLANMLRMQLLEDPKVLFAGYKMPHPLDHYFILKVQTT 78
Query: 347 NETKPEAMVAKALNDLITEVGYLRTKFMEDLGRARA 240
+T P+ ++ A+ +LI VG ++ KF DL RAR+
Sbjct: 79 PDTTPQHVLGNAVTELIQNVGSMKNKFEMDLIRARS 114
>ref|XP_003387390.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Amphimedon queenslandica]
Length = 117
Score = 112 bits (279), Expect = 1e-28
Identities = 49/93 (52%), Positives = 71/93 (76%)
Frame = -2
Query: 521 ITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTTNE 342
+T DTKV NAA F +F+EDHT+GN++ H+LL +PQV+F+GYK+PHPLEH ++R+QTT +
Sbjct: 21 VTKDTKVPNAAIFTVFKEDHTLGNLLMHQLLNDPQVLFSGYKVPHPLEHKFVLRIQTTAD 80
Query: 341 TKPEAMVAKALNDLITEVGYLRTKFMEDLGRAR 243
P+ ++ AL DLI+EV + T+F +D R R
Sbjct: 81 YSPQEALSNALTDLISEVTKIETRF-KDAARER 112
>gb|ORX64818.1| RBP11-like subunits of RNA polymerase [Anaeromyces robustus]
Length = 133
Score = 110 bits (275), Expect = 7e-28
Identities = 49/87 (56%), Positives = 70/87 (80%)
Frame = -2
Query: 527 MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT 348
+ ITPDTK+ NAATF I +EDHT+GN++R +LL+ +V+FAGYK+PHPLEH +I+++QTT
Sbjct: 19 LTITPDTKLPNAATFTIQKEDHTVGNMLRMQLLKNKKVLFAGYKVPHPLEHCIILKIQTT 78
Query: 347 NETKPEAMVAKALNDLITEVGYLRTKF 267
+T PEAM+ +A ++LI E +R KF
Sbjct: 79 PDTTPEAMLMEAFDELIKEFSTIRNKF 105
>ref|XP_018417218.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-a [Nanorana
parkeri]
Length = 117
Score = 109 bits (272), Expect = 1e-27
Identities = 49/86 (56%), Positives = 65/86 (75%)
Frame = -2
Query: 524 KITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTTN 345
KIT DTKV NA F I +EDHT+GN+I+ +LL++PQV+FAGYK+PHPLEH ++IRVQTT
Sbjct: 20 KITKDTKVPNACLFTINKEDHTIGNIIKSQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTP 79
Query: 344 ETKPEAMVAKALNDLITEVGYLRTKF 267
E P+ A+ DLI+E+ L +F
Sbjct: 80 EYSPQEAFTNAITDLISELSLLEERF 105
>gb|ORX51807.1| RBP11-like subunits of RNA polymerase [Piromyces finnis]
Length = 139
Score = 109 bits (272), Expect = 2e-27
Identities = 51/91 (56%), Positives = 69/91 (75%)
Frame = -2
Query: 527 MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT 348
+ ITPDTK+ NAATF +EDHT+GN++R +LL+ +V+FAGYK+PHPLEH +I++VQTT
Sbjct: 19 LTITPDTKLPNAATFTFQKEDHTIGNMLRIQLLKYKKVLFAGYKVPHPLEHCIILKVQTT 78
Query: 347 NETKPEAMVAKALNDLITEVGYLRTKFMEDL 255
+T PEAM+ A DLI E L+ KF +L
Sbjct: 79 ADTTPEAMLMDAFQDLIDEFATLKKKFENEL 109
>ref|XP_002115874.1| hypothetical protein TRIADDRAFT_59743 [Trichoplax adhaerens]
gb|EDV21726.1| hypothetical protein TRIADDRAFT_59743 [Trichoplax adhaerens]
Length = 116
Score = 108 bits (270), Expect = 2e-27
Identities = 51/85 (60%), Positives = 66/85 (77%)
Frame = -2
Query: 521 ITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTTNE 342
IT DTKV NA F I +EDHT+GN+IR +LL++PQVIFAGYK+PHPLE++V+IRVQTT+
Sbjct: 21 ITKDTKVPNACHFTIAKEDHTLGNIIRAQLLKDPQVIFAGYKVPHPLEYDVVIRVQTTSN 80
Query: 341 TKPEAMVAKALNDLITEVGYLRTKF 267
PE + AL DLI+E+ L +F
Sbjct: 81 YSPEEAFSNALTDLISELNVLDDRF 105
>gb|ORY76475.1| RBP11-like subunits of RNA polymerase [Neocallimastix californiae]
Length = 164
Score = 109 bits (273), Expect = 3e-27
Identities = 49/87 (56%), Positives = 69/87 (79%)
Frame = -2
Query: 527 MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT 348
+ ITPDTK+ NAATF + +EDHT+GN++R +LL+ +V+FAGYK+PHPLEH VI+++QTT
Sbjct: 19 LTITPDTKLPNAATFTLQKEDHTIGNMLRMQLLKYKEVLFAGYKVPHPLEHCVILKIQTT 78
Query: 347 NETKPEAMVAKALNDLITEVGYLRTKF 267
T PE M+ +A +DL E G ++TKF
Sbjct: 79 PNTTPENMLMRAFDDLYKEFGTIKTKF 105
>emb|CDH54308.1| rna polymerase ii core subunit [Lichtheimia corymbifera
JMRC:FSU:9682]
Length = 153
Score = 108 bits (271), Expect = 5e-27
Identities = 55/126 (43%), Positives = 80/126 (63%), Gaps = 4/126 (3%)
Frame = -2
Query: 512 DTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTTNETKP 333
DT++ NAATF+I REDHT+GN++R +LL++P+V+FAGYK+PHPLEHN ++VQT T P
Sbjct: 24 DTRIPNAATFKIEREDHTLGNMLRSQLLKDPRVLFAGYKVPHPLEHNFHVKVQTVPGTAP 83
Query: 332 EAMVAKALNDLITEVGYLRTKFMEDLGRAR----ALVIPREQKSMVEQEPQVVQGIQQPT 165
+ A ++LI+E+ L+ KF D+ R R A + +Q+ VV PT
Sbjct: 84 GQALKDATSELISEINTLKNKFDMDVIRQRTFEDAKASQQPMSVFEQQDAHVVMDTDMPT 143
Query: 164 REPVNT 147
+P T
Sbjct: 144 DQPGRT 149
>ref|XP_022917713.1| DNA-directed RNA polymerase II subunit RPB11 [Onthophagus taurus]
Length = 117
Score = 107 bits (268), Expect = 5e-27
Identities = 48/90 (53%), Positives = 66/90 (73%)
Frame = -2
Query: 512 DTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTTNETKP 333
DTKV NAA F I +EDHT+GNVIR++LL++P V+FAGYK+PHPLEH +IR+QTTN+ P
Sbjct: 24 DTKVPNAAIFTINKEDHTLGNVIRNQLLKDPNVLFAGYKVPHPLEHKFVIRIQTTNDYSP 83
Query: 332 EAMVAKALNDLITEVGYLRTKFMEDLGRAR 243
+ + A+ DLI+E+ +F E + R
Sbjct: 84 QEALMNAITDLISELSLFEERFKEAIKERR 113
>ref|XP_017554789.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-a
[Pygocentrus nattereri]
Length = 117
Score = 107 bits (267), Expect = 7e-27
Identities = 48/85 (56%), Positives = 64/85 (75%)
Frame = -2
Query: 521 ITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTTNE 342
IT DTKV NA F + +EDHT+GN+IR +LL++PQV+FAGYK+PHPLEH V+IRVQTT +
Sbjct: 21 ITKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAGYKVPHPLEHKVVIRVQTTPD 80
Query: 341 TKPEAMVAKALNDLITEVGYLRTKF 267
P+ A+ DLI+E+ L +F
Sbjct: 81 YSPQEAFTNAITDLISELSLLEERF 105
>gb|ACO09875.1| DNA-directed RNA polymerase II subunit J [Osmerus mordax]
Length = 117
Score = 107 bits (267), Expect = 7e-27
Identities = 47/85 (55%), Positives = 64/85 (75%)
Frame = -2
Query: 521 ITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTTNE 342
IT DTKV NA F + +EDHT+GN+IR +LL++PQV+FAGYK+PHPLEH ++IRVQTT +
Sbjct: 21 ITKDTKVPNACLFTLSKEDHTLGNIIRSQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPD 80
Query: 341 TKPEAMVAKALNDLITEVGYLRTKF 267
P+ A+ DLI+E+ L +F
Sbjct: 81 YSPQEAFTNAITDLISELSLLEERF 105
>ref|NP_001019571.1| DNA-directed RNA polymerase II subunit RPB11-a [Danio rerio]
gb|AAH95123.1| Polymerase (RNA) II (DNA directed) polypeptide J [Danio rerio]
gb|AAI65488.1| Polr2j protein [Danio rerio]
Length = 117
Score = 107 bits (267), Expect = 7e-27
Identities = 48/85 (56%), Positives = 64/85 (75%)
Frame = -2
Query: 521 ITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTTNE 342
IT DTKV NA F + +EDHT+GN+IR +LL++PQV+FAGYK+PHPLEH V+IRVQTT +
Sbjct: 21 ITKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAGYKVPHPLEHKVVIRVQTTPD 80
Query: 341 TKPEAMVAKALNDLITEVGYLRTKF 267
P+ A+ DLI+E+ L +F
Sbjct: 81 YSPQEAFTNAITDLISELSLLEERF 105
>gb|AAP97076.1| RNA polymerase II subunit [Branchiostoma belcheri]
Length = 135
Score = 107 bits (268), Expect = 8e-27
Identities = 53/108 (49%), Positives = 75/108 (69%), Gaps = 1/108 (0%)
Frame = -2
Query: 521 ITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTTNE 342
IT DTKV NAA F + +EDHT+GN++R +LL++PQVIFAGYK+PHPLEH ++RVQTT +
Sbjct: 21 ITKDTKVPNAAIFTVNKEDHTLGNLLRAQLLKDPQVIFAGYKVPHPLEHKFVLRVQTTPD 80
Query: 341 TKPEAMVAKALNDLITEVGYLRTKFMEDLGR-ARALVIPREQKSMVEQ 201
P+ A+ DLI+EV L +F+ R R+ V+ ++ S + Q
Sbjct: 81 YSPQEAFTNAITDLISEVSLLEERFIGCSEREGRSGVMRKQSTSFLRQ 128
>ref|XP_015794953.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Tetranychus urticae]
Length = 116
Score = 107 bits (266), Expect = 1e-26
Identities = 47/85 (55%), Positives = 65/85 (76%)
Frame = -2
Query: 521 ITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTTNE 342
I +TKV NAA F + +EDHT+GN+IRH+LL++P VIFAGYK+PHPLEH I+RVQTT +
Sbjct: 21 IEKETKVPNAAIFTVNKEDHTLGNLIRHQLLKDPNVIFAGYKVPHPLEHKFILRVQTTGD 80
Query: 341 TKPEAMVAKALNDLITEVGYLRTKF 267
P+ + AL+DL +E+ Y+ +F
Sbjct: 81 YTPQDALKNALSDLCSEISYIEEQF 105
>ref|XP_010746817.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-a
[Larimichthys crocea]
ref|XP_020513643.1| DNA-directed RNA polymerase II subunit RPB11-a [Labrus bergylta]
gb|KKF24199.1| DNA-directed RNA polymerase II subunit RPB11-a [Larimichthys
crocea]
Length = 117
Score = 107 bits (266), Expect = 1e-26
Identities = 47/87 (54%), Positives = 65/87 (74%)
Frame = -2
Query: 527 MKITPDTKVQNAATFEIFREDHTMGNVIRHKLLQEPQVIFAGYKIPHPLEHNVIIRVQTT 348
+ IT DTKV NA F + +EDHT+GN+IR +LL++PQV+FAGYK+PHPLEH ++IRVQTT
Sbjct: 19 ISITKDTKVPNACLFTLNKEDHTLGNIIRAQLLKDPQVLFAGYKVPHPLEHKIVIRVQTT 78
Query: 347 NETKPEAMVAKALNDLITEVGYLRTKF 267
+ P+ A+ DLI+E+ L +F
Sbjct: 79 PDYSPQEAFTNAITDLISELSLLEERF 105