BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00039613
         (639 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo...    78   3e-13
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo...    76   9e-13
gb|PON55302.1| hypothetical protein TorRG33x02_299600 [Trema ori...    75   1e-12
gb|PKA62818.1| Retrovirus-related Pol polyprotein from transposo...    68   8e-11
gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposo...    71   1e-10
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo...    71   1e-10
gb|KHN28812.1| Retrovirus-related Pol polyprotein from transposo...    69   1e-10
gb|KYP63671.1| Retrovirus-related Pol polyprotein from transposo...    69   2e-10
gb|KYP61706.1| Retrovirus-related Pol polyprotein from transposo...    69   2e-10
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro...    70   3e-10
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...    70   3e-10
gb|KYP62384.1| Retrovirus-related Pol polyprotein from transposo...    68   5e-10
gb|ABA97308.2| retrotransposon protein, putative, Ty1-copia subc...    68   8e-10
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    68   1e-09
dbj|GAU44261.1| hypothetical protein TSUD_400070 [Trifolium subt...    68   1e-09
emb|CAN69763.1| hypothetical protein VITISV_005801 [Vitis vinifera]    64   1e-09
gb|PRQ51350.1| putative RNA-directed DNA polymerase [Rosa chinen...    67   2e-09
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]      61   2e-09
gb|PKA67206.1| Retrovirus-related Pol polyprotein from transposo...    62   3e-09
gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]     67   3e-09

>gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 365

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 5/217 (2%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGL 181
           F+ ++S L +  VK+E+E + LLLL SL KS DHLVTT++Y K+TL++E+V   L +N  
Sbjct: 14  FSKMISQLRSINVKLEEENEALLLLSSLPKSYDHLVTTILYGKDTLKVEEVNATLLSNE- 72

Query: 182 MKRANSTKEASDLVVKEHKEKSNSRGSN----KDSGGSSGETCFQCKKPDRFKKKMPHAT 349
           ++   ST E+  +   + + +S ++  N    +     +   C+ CKK   +K+  P  +
Sbjct: 73  VRNKQSTGESLTVKTSQDRGRSKNKFGNQYRYRSISKENDNRCYYCKKEGHWKRDCPKKS 132

Query: 350 STRSL*RNLARILTVLVERMIKPELSKN*RTPVMY*LRNQKGTSIQILV*LGCTYHMCPR 529
             +   ++         E  +   L K+  T   +   +   +S   ++   C+YHMCP 
Sbjct: 133 KQQQQKKSGE-------EASVASRLEKDSETLCTF---SCMDSSDSWILDSDCSYHMCPF 182

Query: 530 RVSSTRIRLSMEDR-FLWKTILCRIVDVGNVHIGIHD 637
           R   +   +    R  +     C+ V +G + I + D
Sbjct: 183 RDWFSTYSIHDGGRVIMGNNSECKSVGIGTIKIKMFD 219


>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 337

 Score = 76.3 bits (186), Expect = 9e-13
 Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGL 181
           F   V DL + +V+I++E + ++LLCSL  S ++LV T+++ ++TL LE+V   L +  L
Sbjct: 124 FTKAVLDLKSVDVRIDEEDQAVMLLCSLPSSFENLVDTMLFGRDTLTLEEVKATLNSREL 183

Query: 182 MKRANSTK-EASD---LVVKEHKEKSNSRGSNKDSGGSSGE-TCFQCKKPDRFKKKMPHA 346
            K+    K E  D   L+ +   EK +S+  NK       E  C+ CKK   F+K+ P  
Sbjct: 184 KKKITENKGEGGDPEALMARGRLEKRDSKSKNKRRSKYKNEKACYYCKKEGHFRKECPER 243

Query: 347 TSTRSL*RNLARILTVLVERMIKPELSKN*RTPVMY*LRNQKGTSIQILV*LGCTYHMCP 526
               +   N    + V+ +     E+             + K  S + ++  GC++HM P
Sbjct: 244 KKKNNGKYNDESDIAVVADGYESAEVLS----------ISTKKHSEEWILDSGCSFHMTP 293

Query: 527 R-RVSSTRIRLSMEDRFLWKTILCRIVDVGNVHIGIHD 637
                S+   +      +   ++C ++ +G + + + D
Sbjct: 294 NLEWFSSYKEIDGGKVLMGNNMVCNVIGIGTIKLKVQD 331


>gb|PON55302.1| hypothetical protein TorRG33x02_299600 [Trema orientalis]
          Length = 226

 Score = 74.7 bits (182), Expect = 1e-12
 Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGL 181
           FN I+ DL   +VK+E+E + +LLL SL KS  + V T++Y+ ET+ +E+V  VL +  L
Sbjct: 32  FNKIILDLENIDVKVEEEDEAILLLNSLDKSYSNFVDTMMYSHETMSMEEVQSVLNSKEL 91

Query: 182 MKRA--NSTKEASDLVVKEHKEKSNSRGSNKDSGGSSGETCFQCKKPDRFKKKMPHATST 355
            K++   S      L+V+   E   +    K    S    CF C K  +FKK        
Sbjct: 92  KKQSERKSENNGEGLIVRGRFETREANNKKKSQLKSRKHKCFICHKEWQFKKNCLDRKKK 151

Query: 356 RSL*RNLARILTVLVERMIKPELSKN*RTPVMY*LRNQKGTSIQILV*LGCTYHMCPRRV 535
            +  ++ +  + V++ R    ++               + T+ + ++  GC++H+CP + 
Sbjct: 152 ETNKQSDSGEVDVVLYRYKSAKVL----------AITSQDTAEKWILDSGCSFHICPNKP 201

Query: 536 SSTRIRLSMEDRFLWKTI 589
                  +ME R  W+ I
Sbjct: 202 WFHTFNYTMEVRLYWEII 219


>gb|PKA62818.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 163

 Score = 68.2 bits (165), Expect = 8e-11
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGL 181
           F  ++S L + +VK+E E + LLLL SL KS DHLVTT++Y K+TL++E V   L +N  
Sbjct: 41  FCKMISQLRSIDVKLEDEDEALLLLSSLPKSYDHLVTTILYDKDTLKVEKVNATLLSNE- 99

Query: 182 MKRANSTKEASDLVVKEHKEKSNSRGSN----KDSGGSSGETCFQCKKPDRFKKKMP 340
           ++   ST E+  + + + + +S ++  N    K         C  CKK   +K+  P
Sbjct: 100 VRNKQSTCESLTVKISQDRGRSKNKFGNQYRYKSISKRKDNRCHYCKKESHWKRDCP 156


>gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 507

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
 Frame = +2

Query: 5   NMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGLM 184
           N I+ +L   +VKIE E   ++LL SL  S +  V ++   KE + +E+V   L +  L 
Sbjct: 34  NSILMELRYIDVKIEDEDAAMILLASLPPSYESFVNSLTVGKECITMEEVKSSLHSRELW 93

Query: 185 KRANSTKE----ASDLVVKEHKE-KSNSRGSNKDSGGSSGETCFQCKKPDRFKKKMPHAT 349
            +A++  E    A  L     K  K       K +  +  + C  CK+P  +KK  P   
Sbjct: 94  FKASANSEGVNGAGLLAFNSTKNGKKKKEQGKKKTKVNPRDICNYCKEPGHWKKDCPKKR 153

Query: 350 STRSL*RNLARILTVLVERMIKPELSKN*RTPVMY*LRNQKGTSIQILV*LGCTYHMCPR 529
           + +S+       +    +   + EL       V+  + N + ++ Q ++  GC+YHMCP 
Sbjct: 154 NQKSV------AVAAQEDSSFENEL-------VLSIVDNHQHSAEQWVLDSGCSYHMCPN 200

Query: 530 RV-SSTRIRLSMEDRFLWKTILCRIVDVGNVHIGIHD 637
           R    T  + S  D F+   + C+ + +G + I +HD
Sbjct: 201 RSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMHD 237


>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 609

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
 Frame = +2

Query: 5   NMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGLM 184
           N I+ +L   +VKIE E   ++LL SL  S +  V ++   KE + +E+V   L +  L 
Sbjct: 61  NSILMELRYIDVKIEDEDAAMILLASLPPSYESFVNSLTVGKECITMEEVKSSLHSRELW 120

Query: 185 KRANSTKE----ASDLVVKEHKE-KSNSRGSNKDSGGSSGETCFQCKKPDRFKKKMPHAT 349
            +A++  E    A  L     K  K       K +  +  + C  CK+P  +KK  P   
Sbjct: 121 FKASANSEGVNGAGLLAFNSTKNGKKKKEQGKKKTKVNPRDICNYCKEPGHWKKDCPKKR 180

Query: 350 STRSL*RNLARILTVLVERMIKPELSKN*RTPVMY*LRNQKGTSIQILV*LGCTYHMCPR 529
           + +S+       +    +   + EL       V+  + N + ++ Q ++  GC+YHMCP 
Sbjct: 181 NQKSV------AVAAQEDSSFENEL-------VLSIVDNHQHSAEQWVLDSGCSYHMCPN 227

Query: 530 RV-SSTRIRLSMEDRFLWKTILCRIVDVGNVHIGIHD 637
           R    T  + S  D F+   + C+ + +G + I +HD
Sbjct: 228 RSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMHD 264


>gb|KHN28812.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 257

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAK-ETLELEDVWQVLQNNG 178
           FN I+ DL   EVK+E+E K LLLL SL KS +H    ++Y K + + LE+V   ++   
Sbjct: 122 FNKIIDDLENIEVKLEEEDKALLLLNSLPKSFEHFKDAILYGKDQDITLEEVQTSIRTKE 181

Query: 179 LMKRANSTKEASDLVVK----------EHKEKSNSRGSNKDSGGSSGETCFQCKKPDRFK 328
           + K+ +S  E +   +             ++KS SR ++  +G  +   CF C K   FK
Sbjct: 182 MQKQQDSKSEDNGESLNISRGRNEKKGTRRKKSRSRSTDSKNGQKTKFKCFNCHKTGHFK 241

Query: 329 KKMPHATSTRSL 364
           K  P     RSL
Sbjct: 242 KDCPDKIKKRSL 253


>gb|KYP63671.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 268

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGL 181
           FN I+ DL +  VK++ E  V++LLCSL KS ++ + T++Y ++++ L +V   LQ+  L
Sbjct: 125 FNRIILDLQSIGVKVDDEDLVIILLCSLPKSYENFIDTMLYGRDSITLNNVKDSLQSKEL 184

Query: 182 MKRANSTKEASDLVVKEHKEKSNSRGSNKDS-------GGSSGETCFQCKKPDRFKKKMP 340
            +R  S+  A D+ +   + +S  RG++            S    C++CK+    +K  P
Sbjct: 185 KRRVVSSSNADDVGLTASRGRSTERGNSSKGHTRSNSLSKSKKARCYKCKEVGHIRKNCP 244

Query: 341 HATSTRS 361
                R+
Sbjct: 245 QLKKDRN 251


>gb|KYP61706.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 295

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 5/217 (2%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGL 181
           FN I+ DL + +VKI+ E + ++LL SL K  +H V T++Y K +L + +V   L +  +
Sbjct: 17  FNKIILDLKSIDVKIDDEDQAIILLSSLPKRFEHFVDTMLYGKASLIMAEVKATLNSKEI 76

Query: 182 MKRANSTKE--ASDLVVKEHKEKSNSRGSNKDSGGSSGET--CFQCKKPDRFKKKMPHAT 349
            +  +S  E  A  L  +  +EK + +        S G+   CF C K   FKK  P+  
Sbjct: 77  QRNGDSKGEQVAEGLFTRGRQEKKDFKQKKSSRSKSKGKNKRCFICDKEGHFKKDCPN-- 134

Query: 350 STRSL*RNLARILTVLVERMIKPELSKN*RTPVMY*LRNQKGTSIQILV*LGCTYHMCPR 529
                 R  A +L V                         + T  + ++  GC++HM P 
Sbjct: 135 ------RESAEVLAV-----------------------TDQDTHKEWILDSGCSFHMTPN 165

Query: 530 R-VSSTRIRLSMEDRFLWKTILCRIVDVGNVHIGIHD 637
           +    T  ++      L     C+++ +G+V + + D
Sbjct: 166 KDWFETYNQVDGGTVLLGNNKACKVIGIGSVRLRMFD 202


>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
          Length = 1309

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 10/222 (4%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGL 181
           FN I+ DL   ++KI  E   +L+L SL +S +H V T++Y KETL + +V   L +  L
Sbjct: 124 FNKIILDLKNVDIKITDEDCAILMLSSLPRSYEHFVDTMLYGKETLTMAEVKSALNSKEL 183

Query: 182 MK----RANSTKEASDLVVKEHKEKSNSR--GSNKDSGGSSGE-TCFQCKKPDRFKKKMP 340
            K    +  ST E  ++  + +K +S +   G ++    + G+  CF C K   FKK  P
Sbjct: 184 HKKNETKMESTGEGLNVRGRTYKRESRNEKGGKHRSQSRTRGKLKCFVCHKEGHFKKDCP 243

Query: 341 HATSTRSL*RNLARILTVLVERMIKPELSKN*RTPVMY*LRNQKGTSIQILV*LGCTYHM 520
              +     R       V+ +     E+    RT       N++   +   +  GC++HM
Sbjct: 244 DRRARNPERRKDPGDAAVVSDGYESAEVLVVSRT-------NKQDCWV---MDSGCSFHM 293

Query: 521 CPRRVSSTRIRLSMEDR---FLWKTILCRIVDVGNVHIGIHD 637
           CP  + S    L  E+     L     C+++ +G+V + +HD
Sbjct: 294 CP--IKSWFQNLVEEESGHVLLGNNRECKVMGIGSVLLKMHD 333


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 25/202 (12%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGL 181
           F  IV+DL + EVK ++E   L+LLCSL  S  +   T++Y+++TL L++V+  L     
Sbjct: 66  FKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHTKEK 125

Query: 182 MKR----ANSTKEASDLVVKEHKEKSNSRGSNKDSGGSS----------GETCFQCKK-- 313
           MK+      S  +A  LVV+  ++K N++  ++D   SS           ++C  CK+  
Sbjct: 126 MKKMVPSEGSNSQAEGLVVRGRQQKKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDG 185

Query: 314 ---------PDRFKKKMPHATSTRSL*RNLARILTVLVERMIKPELSKN*RTPVMY*LRN 466
                     D+ K+   +    +      A I+T   +     EL       V Y    
Sbjct: 186 HDISECWKLQDKDKRTRKYIPKGKKEEEGKAAIVT---DEKSDAELL------VAY--AG 234

Query: 467 QKGTSIQILV*LGCTYHMCPRR 532
              TS Q ++   CTYHMCP R
Sbjct: 235 CAQTSDQWILDTACTYHMCPNR 256


>gb|KYP62384.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 254

 Score = 67.8 bits (164), Expect = 5e-10
 Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 13/224 (5%)
 Frame = +2

Query: 5   NMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGLM 184
           N ++ +L   +VKIE E   ++LL SL  S +  V ++   KE + +E+V   L +    
Sbjct: 34  NSVLMELRDIDVKIEDEDAAMILLASLPPSYESFVNSLSVGKECITMEEVKSSLHSREFR 93

Query: 185 KRANSTKEASD---LVV---------KEHKEKSNSRGSNKDSGGSSGETCFQCKKPDRFK 328
            RA+   E S+   LVV         K+HK K  +  + KD        C  CK+P  +K
Sbjct: 94  LRASGNSEESNGSSLVVSNSGKNMKKKKHKSKRKTNVNPKD-------ICNYCKEPGHWK 146

Query: 329 KKMPHATSTRSL*RNLARILTVLVERMIKPELSKN*RTPVMY*LRNQKGTSIQILV*LGC 508
           K  P      S+               +  E S +    V+    + + +  Q ++  GC
Sbjct: 147 KDCPKKKGKPSI--------------AVAKEESTSENELVLSIADHPQHSEDQWILDSGC 192

Query: 509 TYHMCPRRV-SSTRIRLSMEDRFLWKTILCRIVDVGNVHIGIHD 637
           ++HMCP R    T  + S  + F+     C+ + +G + I +HD
Sbjct: 193 SFHMCPNRTWFDTYEKKSGGNVFMGNDAPCKTIGIGTIKIKMHD 236


>gb|ABA97308.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 407

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 6/119 (5%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGL 181
           FN +V+DL+  +V+++ E K ++ LCSL +S +H+VTT+ Y KET++ +D+   L     
Sbjct: 111 FNQLVTDLVKMDVEVDDEDKAIVFLCSLPESYEHVVTTLTYGKETIKTKDITSALLARDQ 170

Query: 182 MK--RANSTKEASDLVVKE----HKEKSNSRGSNKDSGGSSGETCFQCKKPDRFKKKMP 340
           M+  +   T +A  L+VKE    HK K N +             CF+C +     ++ P
Sbjct: 171 MRKNKEGETSQAEGLLVKEDHAGHKVKKNKK--------KKMVQCFRCDEWGHISRECP 221


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease
 emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
          Length = 1328

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGL 181
           FN +++ L    VKIE+E K +LLL SL  S D+L TT+++ K T+EL+DV   L  N  
Sbjct: 125 FNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEK 184

Query: 182 MKRANSTKEASDLVVK----------EHKEKSNSRGSNKDSGGSSGETCFQCKKPDRFKK 331
           M R     +   L+ +           +  +S +RG +K+   S    C+ C +P  FK+
Sbjct: 185 M-RKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKR 243

Query: 332 KMPH 343
             P+
Sbjct: 244 DCPN 247


>dbj|GAU44261.1| hypothetical protein TSUD_400070 [Trifolium subterraneum]
          Length = 635

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 47/132 (35%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKE-TLELEDVWQVLQNNG 178
           FN I+ DL   +VKIE E +   LLC+L KS +HL   +IY KE T+ L++V   L+   
Sbjct: 266 FNKIIDDLANIDVKIEDEDQAFHLLCALPKSLEHLNDALIYGKEGTITLDEVQAALRTKE 325

Query: 179 LMK-----------RANSTKEASDLVVKEHKEKSNSRGSNKDSGGSSGETCFQCKKPDRF 325
           L+K             N T+  SD   K   +K  S+   K  GGS  + C+ C +P  F
Sbjct: 326 LIKLNELKIDDSGEGLNVTRGRSDNRGKGKGKKHRSKSRAKGDGGSKFK-CYHCHEPGHF 384

Query: 326 KKKMPHATSTRS 361
           KK  P    + S
Sbjct: 385 KKDCPQRRGSDS 396


>emb|CAN69763.1| hypothetical protein VITISV_005801 [Vitis vinifera]
          Length = 111

 Score = 63.5 bits (153), Expect = 1e-09
 Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSD--DHLVTTVIYAKETLELEDVWQVLQNN 175
           FN I+SDL   +VK E E K L+LL SL  S   ++LVTT+++ KETL+LE++  VL   
Sbjct: 14  FNQIISDLKRIDVKFEDEDKTLMLLNSLPASSTYENLVTTLMWKKETLDLEEITSVLLGF 73

Query: 176 GLMKRAN-STKEASDLVVKEHKEKSNSRGSNKDSGGSSGETC 298
              K++N  + +   LV K ++E    RG NK     S   C
Sbjct: 74  NQRKKSNYESSQGEGLVSKSNQE----RGRNKSRSALSNNKC 111


>gb|PRQ51350.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 460

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 7/120 (5%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGL 181
           F  +V  L   +VKIE+E + LLLL SL  S ++++TT++Y K+TL++E+V   L N+  
Sbjct: 128 FRGLVDQLAKVDVKIEEEDQALLLLTSLPDSYENIITTILYGKDTLKMEEVESTLLNHEK 187

Query: 182 MKRANSTKEASDLVVKEHKE--KSNSRGS-----NKDSGGSSGETCFQCKKPDRFKKKMP 340
            ++A+ + + S  V ++     +S +RGS     +K  G   G+ C++CK+    +   P
Sbjct: 188 RRKADDS-QISVFVAQDQNRWGRSTARGSSGHSRSKSRGRGKGKQCYKCKEWGHIRPDCP 246


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score = 60.8 bits (146), Expect(2) = 2e-09
 Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGL 181
           F  IV+DL + EVK +++   L+LLCSL  S  +   T++Y+++TL L++V+        
Sbjct: 124 FKEIVADLESMEVKYDEDDLGLILLCSLPSSYANFRGTILYSRDTLTLKEVYDAFHAKEK 183

Query: 182 MKR----ANSTKEASDLVVKEHKEKSNSRGSNKDSGGSS 286
           MK+      S  +A  LVV+  ++K N++  ++D   SS
Sbjct: 184 MKKMVTSEGSNSQAEGLVVRGRQQKKNTKNQSRDKSSSS 222



 Score = 28.9 bits (63), Expect(2) = 2e-09
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +1

Query: 343 CHKYKEFMKKFGKN-SDGASGKDDQAGVVEELENPCDVLTAKSERNEYSNTCLTRVHISH 519
           C K ++  K+ GK    G   ++ +A VV + ++  ++L A      Y+    T      
Sbjct: 249 CWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVA------YAGCAQT------ 296

Query: 520 VSKESEFNSYKAVDGGSVLMENDS 591
            S +  F +Y+A+ GG+VLM +D+
Sbjct: 297 -SDQDWFATYEALQGGTVLMGDDT 319


>gb|PKA67206.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 85

 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 32/81 (39%), Positives = 55/81 (67%)
 Frame = +2

Query: 11  IVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGLMKR 190
           ++S L + ++K+E++ + LLLL SL KS DHL+TT++Y K+TL++E V   L +N  ++ 
Sbjct: 1   MISQLRSIDIKLEEDDEALLLLSSLPKSYDHLITTILYGKDTLKMEKVNATLFSNE-VRN 59

Query: 191 ANSTKEASDLVVKEHKEKSNS 253
             ST E+S +   + + +SNS
Sbjct: 60  KQSTGESSTVKTNQDRGRSNS 80


>gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 1308

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 39/121 (32%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
 Frame = +2

Query: 2   FNMIVSDLLAQEVKIEKEGKVLLLLCSLQKSDDHLVTTVIYAKETLELEDVWQVLQNNGL 181
           FN ++ DL   +V I+ E K ++ L SL ++ +H V T++Y +++L +E+V   L +  L
Sbjct: 125 FNKVILDLENIDVSIDDEDKAIIFLASLPQTFEHFVDTLMYGRDSLSMEEVLAALNSKEL 184

Query: 182 MKRANSTKEASD-LVVKEHKEKSNSRGSNKDSGGSSGET-CFQCKK--------PDRFKK 331
            KR+++ +E  + LVV+   E+ + +G N     S  +  C+ C          PDRFKK
Sbjct: 185 KKRSDAKEEIGEGLVVRGRPEQKSFKGKNTPRSKSKFKRKCYICNSEKHFKRDCPDRFKK 244

Query: 332 K 334
           K
Sbjct: 245 K 245