BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00039611
         (534 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008776306.1| PREDICTED: pentatricopeptide repeat-containi...    69   2e-13
ref|XP_010912878.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-13
ref|XP_020587008.1| pentatricopeptide repeat-containing protein ...    76   7e-13
gb|OAY77775.1| putative pentatricopeptide repeat-containing prot...    64   5e-12
gb|OVA13316.1| Pentatricopeptide repeat [Macleaya cordata]             74   6e-12
gb|PKU75992.1| Pentatricopeptide repeat-containing protein [Dend...    68   4e-10
ref|XP_020673763.1| pentatricopeptide repeat-containing protein ...    68   4e-10
ref|XP_009412940.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-09
gb|ONK59404.1| uncharacterized protein A4U43_C08F6080 [Asparagus...    67   1e-09
gb|KMZ69205.1| putative Pentatricopeptide repeat-containing prot...    66   3e-09
gb|OAY77477.1| Pentatricopeptide repeat-containing protein, chlo...    65   3e-09
ref|XP_020098161.1| pentatricopeptide repeat-containing protein ...    65   4e-09
ref|XP_010039060.1| PREDICTED: pentatricopeptide repeat-containi...    58   5e-09
gb|KCW48819.1| hypothetical protein EUGRSUZ_K02455 [Eucalyptus g...    58   5e-09
gb|PIA62584.1| hypothetical protein AQUCO_00200532v1 [Aquilegia ...    62   6e-08
gb|EEF52144.1| pentatricopeptide repeat-containing protein, puta...    62   7e-08
ref|XP_015578422.1| PREDICTED: pentatricopeptide repeat-containi...    62   8e-08
gb|PKA65174.1| Pentatricopeptide repeat-containing protein [Apos...    62   8e-08
ref|XP_011625843.1| pentatricopeptide repeat-containing protein ...    48   7e-07
ref|XP_012080232.1| pentatricopeptide repeat-containing protein ...    59   9e-07

>ref|XP_008776306.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Phoenix dactylifera]
          Length = 622

 Score = 69.3 bits (168), Expect(2) = 2e-13
 Identities = 32/71 (45%), Positives = 49/71 (69%)
 Frame = -2

Query: 287 FDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALDTS 108
           FD + Q DP L+NS++ + SKL  H+E L++ F  HRK T I+ +S+  +LK CAAL  S
Sbjct: 53  FDAIPQPDPGLSNSIIFSYSKLSMHKEVLKIFFSVHRKKTQILFHSIPSVLKSCAALAAS 112

Query: 107 FEGRQVYSLVV 75
            EG+QV++ ++
Sbjct: 113 NEGKQVHTYIL 123



 Score = 33.5 bits (75), Expect(2) = 2e-13
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = -3

Query: 64  FVQSGLINFYSKCGDLDSAKR 2
           F+Q+ LI+FYSK GDL+SA+R
Sbjct: 132 FIQTSLIDFYSKNGDLNSARR 152


>ref|XP_010912878.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Elaeis guineensis]
          Length = 622

 Score = 68.9 bits (167), Expect(2) = 5e-13
 Identities = 32/71 (45%), Positives = 47/71 (66%)
 Frame = -2

Query: 287 FDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALDTS 108
           FD + Q D +L NS+++T SKL  H+E L+  F  H K T I+ +S+  +LK CAAL  S
Sbjct: 53  FDAIPQPDSYLCNSIITTYSKLSMHKEVLKTFFSVHHKKTQILFHSIPPVLKSCAALAAS 112

Query: 107 FEGRQVYSLVV 75
            EG+QV+S ++
Sbjct: 113 NEGKQVHSYIL 123



 Score = 32.7 bits (73), Expect(2) = 5e-13
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = -3

Query: 64  FVQSGLINFYSKCGDLDSAKR 2
           F+++ LI+FYSK GDLDSA R
Sbjct: 132 FIRTALIDFYSKNGDLDSATR 152


>ref|XP_020587008.1| pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Phalaenopsis equestris]
          Length = 617

 Score = 76.3 bits (186), Expect = 7e-13
 Identities = 37/76 (48%), Positives = 53/76 (69%)
 Frame = -2

Query: 293 QPFDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALD 114
           Q FD M Q D FL+NS++S  SKL  H +AL++ FL+HRKN  ++ +S+  +LK CA+L 
Sbjct: 51  QVFDAMPQPDSFLSNSILSAHSKLSLHWQALEIFFLSHRKNIQVISFSIPSVLKACASLA 110

Query: 113 TSFEGRQVYSLVVRCG 66
            S  G+QV+SLV + G
Sbjct: 111 VSDAGKQVHSLVRKLG 126


>gb|OAY77775.1| putative pentatricopeptide repeat-containing protein [Ananas
           comosus]
          Length = 619

 Score = 64.3 bits (155), Expect(2) = 5e-12
 Identities = 34/79 (43%), Positives = 44/79 (55%)
 Frame = -2

Query: 293 QPFDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALD 114
           Q FD + Q DP L  S++   SKL  H+E L   F    KNT I   S+  +LK CA L 
Sbjct: 51  QLFDAIPQPDPTLCGSIILAYSKLSLHKEVLGTFFSARNKNTHIPFVSIPPVLKSCAVLA 110

Query: 113 TSFEGRQVYSLVVRCGICA 57
             +EGRQV+S V+  G C+
Sbjct: 111 AIYEGRQVHSQVLVRGFCS 129



 Score = 33.9 bits (76), Expect(2) = 5e-12
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = -3

Query: 64  FVQSGLINFYSKCGDLDSAKR 2
           FVQ+ LI+FY+K GD+DSA+R
Sbjct: 132 FVQTALIDFYAKNGDMDSARR 152


>gb|OVA13316.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 617

 Score = 73.6 bits (179), Expect = 6e-12
 Identities = 37/76 (48%), Positives = 49/76 (64%)
 Frame = -2

Query: 293 QPFDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALD 114
           Q FD++ Q DP L NS+++T  KL   +EAL+  FL HR  T IVHYS    +K CA L 
Sbjct: 51  QIFDQIPQPDPHLCNSMITTYYKLSLKKEALETFFLIHRNETQIVHYSFPPAIKSCALLS 110

Query: 113 TSFEGRQVYSLVVRCG 66
            + EG+QV+SLV+  G
Sbjct: 111 ATNEGKQVHSLVISYG 126


>gb|PKU75992.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 618

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 35/76 (46%), Positives = 49/76 (64%)
 Frame = -2

Query: 293 QPFDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALD 114
           Q FD M Q D  L+NS++S  SKL  H EAL++  L+HRKN  +  +S+  +LK CA+L 
Sbjct: 52  QVFDAMPQPDSLLSNSILSAHSKLSLHGEALEIFVLSHRKNIQVNFFSIPSVLKACASLA 111

Query: 113 TSFEGRQVYSLVVRCG 66
               G+QV+SLV + G
Sbjct: 112 VLDAGKQVHSLVRKLG 127


>ref|XP_020673763.1| pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Dendrobium catenatum]
          Length = 618

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 35/76 (46%), Positives = 49/76 (64%)
 Frame = -2

Query: 293 QPFDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALD 114
           Q FD M Q D  L+NS++S  SKL  H EAL++  L+HRKN  +  +S+  +LK CA+L 
Sbjct: 52  QVFDAMPQPDSLLSNSILSAHSKLSLHGEALEIFVLSHRKNIQVNFFSIPSVLKACASLA 111

Query: 113 TSFEGRQVYSLVVRCG 66
               G+QV+SLV + G
Sbjct: 112 VLDAGKQVHSLVRKLG 127


>ref|XP_009412940.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Musa acuminata subsp. malaccensis]
          Length = 626

 Score = 57.4 bits (137), Expect(2) = 1e-09
 Identities = 31/74 (41%), Positives = 43/74 (58%)
 Frame = -2

Query: 287 FDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALDTS 108
           FD + Q D  L +SVVS  SKL  H EAL   +  HRK + I+  S+  +LK CA L  +
Sbjct: 62  FDALPQPDSDLCSSVVSACSKLSLHREALAAFYSAHRKGSPILFLSIPPVLKSCARLPAA 121

Query: 107 FEGRQVYSLVVRCG 66
            +G+QV+  V+  G
Sbjct: 122 DQGKQVHCHVLLRG 135



 Score = 32.7 bits (73), Expect(2) = 1e-09
 Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
 Frame = -3

Query: 91  CILSLYGAG---FVQSGLINFYSKCGDLDSAKR 2
           C + L G G   F+Q+ LI+FY K GDL SA+R
Sbjct: 129 CHVLLRGFGSNVFIQAALIDFYCKTGDLGSARR 161


>gb|ONK59404.1| uncharacterized protein A4U43_C08F6080 [Asparagus officinalis]
          Length = 609

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 36/81 (44%), Positives = 50/81 (61%)
 Frame = -2

Query: 287 FDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALDTS 108
           FDR+ Q D F ANS++STLSKLD HE+AL+  FL  +KNT               AL  +
Sbjct: 53  FDRIPQPDSFFANSIISTLSKLDRHEKALETFFLARQKNT----------RXXXXALGAT 102

Query: 107 FEGRQVYSLVVRCGICAVWLD 45
            EG++++SLV+R G+   WL+
Sbjct: 103 IEGKKMHSLVIRSGL---WLN 120


>gb|KMZ69205.1| putative Pentatricopeptide repeat-containing protein [Zostera
           marina]
          Length = 615

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/76 (39%), Positives = 48/76 (63%)
 Frame = -2

Query: 293 QPFDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALD 114
           Q FD + + D  L NS+V+T SKL  + EAL++ F +HR+ T +  +S+  ++K CA   
Sbjct: 53  QMFDTIPKPDSILTNSIVATCSKLSLYSEALEVFFSSHRRGTQLAFFSIPPVIKACALFS 112

Query: 113 TSFEGRQVYSLVVRCG 66
              EG+Q++S +VR G
Sbjct: 113 AFHEGKQLHSHIVRSG 128


>gb|OAY77477.1| Pentatricopeptide repeat-containing protein, chloroplastic [Ananas
           comosus]
          Length = 465

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 34/79 (43%), Positives = 45/79 (56%)
 Frame = -2

Query: 293 QPFDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALD 114
           Q FD + Q DP L  S++   SKL  H+E L   F    KNT I   S+  +LK CA L 
Sbjct: 51  QLFDAIPQPDPTLCGSIILAYSKLSLHKEVLGTFFSARNKNTHIPFVSIPPVLKSCAVLA 110

Query: 113 TSFEGRQVYSLVVRCGICA 57
            ++EGRQV+S V+  G C+
Sbjct: 111 ATYEGRQVHSQVLVRGFCS 129


>ref|XP_020098161.1| pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Ananas comosus]
          Length = 619

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/79 (43%), Positives = 45/79 (56%)
 Frame = -2

Query: 293 QPFDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALD 114
           Q FD + Q DP L  S++   SKL  H+E L   F    KNT I   S+  +LK CA L 
Sbjct: 51  QLFDAIPQPDPTLCGSIILAYSKLSLHKEVLGTFFSARNKNTHIPFVSIPPVLKSCAVLA 110

Query: 113 TSFEGRQVYSLVVRCGICA 57
            ++EGRQV+S V+  G C+
Sbjct: 111 ATYEGRQVHSQVLVRGFCS 129


>ref|XP_010039060.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic [Eucalyptus grandis]
          Length = 618

 Score = 57.8 bits (138), Expect(2) = 5e-09
 Identities = 28/75 (37%), Positives = 44/75 (58%)
 Frame = -2

Query: 287 FDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALDTS 108
           FDR+ Q +  L+NS++S  S+L  HEEA++      R   CI  Y+V  I+K C ++   
Sbjct: 53  FDRIPQPEQSLSNSLISVYSRLSSHEEAIEAFRSMIRNGVCIDSYTVPPIVKSCLSVADF 112

Query: 107 FEGRQVYSLVVRCGI 63
             G+QV+ L + CG+
Sbjct: 113 DLGKQVHCLAISCGL 127



 Score = 30.4 bits (67), Expect(2) = 5e-09
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = -3

Query: 64  FVQSGLINFYSKCGDLDSAKR 2
           FVQ+ L+NFYS+ G+L SA+R
Sbjct: 132 FVQTALMNFYSRGGELASAER 152


>gb|KCW48819.1| hypothetical protein EUGRSUZ_K02455 [Eucalyptus grandis]
          Length = 574

 Score = 57.8 bits (138), Expect(2) = 5e-09
 Identities = 28/75 (37%), Positives = 44/75 (58%)
 Frame = -2

Query: 287 FDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALDTS 108
           FDR+ Q +  L+NS++S  S+L  HEEA++      R   CI  Y+V  I+K C ++   
Sbjct: 9   FDRIPQPEQSLSNSLISVYSRLSSHEEAIEAFRSMIRNGVCIDSYTVPPIVKSCLSVADF 68

Query: 107 FEGRQVYSLVVRCGI 63
             G+QV+ L + CG+
Sbjct: 69  DLGKQVHCLAISCGL 83



 Score = 30.4 bits (67), Expect(2) = 5e-09
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = -3

Query: 64  FVQSGLINFYSKCGDLDSAKR 2
           FVQ+ L+NFYS+ G+L SA+R
Sbjct: 88  FVQTALMNFYSRGGELASAER 108


>gb|PIA62584.1| hypothetical protein AQUCO_00200532v1 [Aquilegia coerulea]
          Length = 622

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 31/76 (40%), Positives = 47/76 (61%)
 Frame = -2

Query: 293 QPFDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALD 114
           Q FD++ Q D FL N++V + SK+  + EA+Q+ F  H     + ++++  +LK CA L 
Sbjct: 54  QVFDQIPQPDSFLYNAIVYSYSKVYLYPEAIQLFFSMHCNKVKVDYFAIPPVLKSCACLS 113

Query: 113 TSFEGRQVYSLVVRCG 66
            S EGRQV+SLV   G
Sbjct: 114 ASKEGRQVHSLVFSLG 129


>gb|EEF52144.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 434

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = -2

Query: 293 QPFDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALD 114
           Q FD++ Q    L NS++ST SKL  H++AL+  F  H  +T +  ++   ++K C++L 
Sbjct: 51  QLFDQVPQPGQILYNSLISTYSKLSLHKDALKTFFSMHHSDTRLSCFTGPPVIKACSSLL 110

Query: 113 TSFEGRQVYSLVVRCGI-CAVWLDQLLFEMW 24
               G+QV+SL+V CGI C V++   L + +
Sbjct: 111 AIDVGKQVHSLIVICGIDCNVYVQTSLMDFY 141


>ref|XP_015578422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic [Ricinus communis]
          Length = 618

 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = -2

Query: 293 QPFDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALD 114
           Q FD++ Q    L NS++ST SKL  H++AL+  F  H  +T +  ++   ++K C++L 
Sbjct: 51  QLFDQVPQPGQILYNSLISTYSKLSLHKDALKTFFSMHHSDTRLSCFTGPPVIKACSSLL 110

Query: 113 TSFEGRQVYSLVVRCGI-CAVWLDQLLFEMW 24
               G+QV+SL+V CGI C V++   L + +
Sbjct: 111 AIDVGKQVHSLIVICGIDCNVYVQTSLMDFY 141


>gb|PKA65174.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 620

 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = -2

Query: 287 FDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALDTS 108
           F  + + D  ++ S+VS  SKL  H E L++ FL+H K T I  +S+  +LK CA+L   
Sbjct: 56  FHTLPEPDSSISYSMVSAHSKLSFHCEVLEIFFLSHHKKTLIDFFSIPPVLKACASLLAI 115

Query: 107 FEGRQVYSLVVRCGICA-VWLDQLLFEMW 24
            EG+QV+SLV++ G  + V++   L +++
Sbjct: 116 REGKQVHSLVLKLGFFSNVFIQTALIDLY 144


>ref|XP_011625843.1| pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like isoform X1 [Amborella trichopoda]
          Length = 632

 Score = 47.8 bits (112), Expect(2) = 7e-07
 Identities = 26/76 (34%), Positives = 40/76 (52%)
 Frame = -2

Query: 293 QPFDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALD 114
           Q FD + Q D    NS++S  S+   H E  ++ FL   K T    +S+  +LK  AAL 
Sbjct: 59  QVFDEIPQPDTTTFNSMLSGFSRAKMHLETTEIYFLMREKQTQFDSFSLPPVLKAFAALP 118

Query: 113 TSFEGRQVYSLVVRCG 66
              +GR ++S V++ G
Sbjct: 119 ALNQGRSLHSFVIKAG 134



 Score = 33.1 bits (74), Expect(2) = 7e-07
 Identities = 12/21 (57%), Positives = 18/21 (85%)
 Frame = -3

Query: 64  FVQSGLINFYSKCGDLDSAKR 2
           F Q+GL++ Y+KCGDL SA++
Sbjct: 141 FTQTGLVDLYAKCGDLGSAQK 161


>ref|XP_012080232.1| pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic [Jatropha curcas]
 gb|KDP31224.1| hypothetical protein JCGZ_11600 [Jatropha curcas]
          Length = 610

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
 Frame = -2

Query: 293 QPFDRMSQQDPFLANSVVSTLSKLDHHEEALQMLFLTHRKNTCIVHYSVALILKMCAALD 114
           Q FD++S  D FL NS++ST +KL  H EA++     H KN  +  ++   ++K C +L 
Sbjct: 51  QVFDQISHPDQFLYNSLISTYTKLSMHIEAVKAFVSMHHKNVRLTCFTAPPVIKACFSLL 110

Query: 113 TSFEGRQVYSLVVRCGI-CAVWLDQLLFEMW 24
               G+QV++LV+  GI C V+    + + +
Sbjct: 111 AVDVGKQVHALVLNNGIHCNVYFQTAMMDFY 141