BLASTX nr result

ID: Ophiopogon27_contig00039574 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00039574
         (414 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK76793.1| uncharacterized protein A4U43_C03F32200 [Asparagu...    55   6e-06

>gb|ONK76793.1| uncharacterized protein A4U43_C03F32200 [Asparagus officinalis]
          Length = 351

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
 Frame = +2

Query: 11  RLNELCRSGELRHTGELCHAGRLYQARLKPQSCQEGEVAELRQKRQPRL-----SNQVCQ 175
           R +E  R GE    GE  H   L   R   +     +    +++ + RL     SN   +
Sbjct: 196 RASEPTRVGESSKAGEPRH-NHLADKRKGREVGDSSQTRSSKRRVETRLRTGVRSNAKTR 254

Query: 176 KSRLNHGLGSCNDA-----HTTTGSIDHRNDKKSLHTEGCKL*PSVDLREHLTCKCTVNE 340
           +SR +    +   +      +T+ ++ + +   S    GC   P+ DLRE+LT K T+++
Sbjct: 255 QSRRDRPTPAPKHSTQRAPESTSKNLSYAHPSYSSEAGGCHQPPTEDLREYLTRKRTIHK 314

Query: 341 MAPRCHCERLVRAILAGC 394
             P+CHCERL+  +LA C
Sbjct: 315 ANPQCHCERLIHTVLADC 332


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