BLASTX nr result
ID: Ophiopogon27_contig00039344
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00039344
(676 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010520633.1| PREDICTED: uncharacterized protein LOC104799... 54 5e-17
gb|KYP56875.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanu... 53 1e-13
gb|AQK73740.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 1e-13
gb|PKU68428.1| hypothetical protein MA16_Dca021968 [Dendrobium c... 56 1e-13
ref|XP_020233683.1| craniofacial development protein 2-like [Caj... 53 1e-13
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac... 55 2e-13
gb|AQK43109.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 3e-13
gb|ONM58670.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 1e-12
gb|ONL92524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 3e-12
gb|ONM55524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 3e-12
gb|ONM55942.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 3e-12
gb|ONM54584.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 3e-12
gb|ONM52836.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 3e-12
gb|AQL03708.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 3e-12
gb|AQK98364.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 3e-12
gb|AQK92036.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 3e-12
gb|AQK84025.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 3e-12
gb|AQK43188.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 3e-12
gb|ONM06616.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 3e-12
gb|ONM03863.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 53 3e-12
>ref|XP_010520633.1| PREDICTED: uncharacterized protein LOC104799692 [Tarenaya
hassleriana]
Length = 261
Score = 53.9 bits (128), Expect(4) = 5e-17
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 320 ETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
+TKWVGEKS I N +LWY+G+ RN NGV I++D +ES+V K
Sbjct: 128 KTKWVGEKSKEIGNTSSRLWYSGQERNRNGVGIILDRSLKESVVAVK 174
Score = 35.0 bits (79), Expect(4) = 5e-17
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 553 SIKREFSDHFIGDLSELVGRDNGGYVMLQGGHGYG 657
S+ E S GDL+ VG+D GY M+ GG GYG
Sbjct: 222 SVSSEESIFIGGDLNGHVGKDRQGYEMVHGGFGYG 256
Score = 33.5 bits (75), Expect(4) = 5e-17
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*-EEVTIFSAYALQVGL 548
K VGD I+L+KLVV E + + SAYA Q+GL
Sbjct: 174 KRVGDRIILVKLVVEGEAINVISAYAPQIGL 204
Score = 32.7 bits (73), Expect(4) = 5e-17
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 142 QHVASVSS*CKNGHIKNFRRGARYLCMRVEL---C*LLGKLSGKMIELVDTIINRKVN 306
Q V S + G+ + +R+G L M ++ +G L+GK++ELVDT+ R+VN
Sbjct: 65 QSVDVTKSQSRGGNRQTYRKGDMKLSMERKVRVGTWNIGSLTGKLMELVDTMSRRRVN 122
>gb|KYP56875.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 925
Score = 52.8 bits (125), Expect(4) = 1e-13
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +2
Query: 320 ETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
ETKW+GEK+ + + FKLWYTGK R NGV I+VD + + +V K
Sbjct: 96 ETKWIGEKAKELYSSGFKLWYTGKVRARNGVGIIVDKEWRKDVVEVK 142
Score = 30.8 bits (68), Expect(4) = 1e-13
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGV 660
GDL+ VG D+ GY GGHG GV
Sbjct: 201 GDLNGHVGGDSRGYEGFHGGHGLGV 225
Score = 30.0 bits (66), Expect(4) = 1e-13
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEVT-IFSAYALQVGLVEY*K 563
K VGD I+ +KLV ++ T + SAYA Q+G E+ K
Sbjct: 142 KRVGDRIIALKLVARKDTTNVISAYAPQIGSEEHHK 177
Score = 29.6 bits (65), Expect(4) = 1e-13
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVN 306
+G L+GK +E+VDT+I R++N
Sbjct: 70 VGTLTGKAMEIVDTMIRRRIN 90
>gb|AQK73740.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 722
Score = 52.8 bits (125), Expect(4) = 1e-13
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 121 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 172
Score = 35.4 bits (80), Expect(4) = 1e-13
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 172 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 210
Score = 27.7 bits (60), Expect(4) = 1e-13
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 580 FIGDLSELVGRDNGGYVMLQGGHGYGVK 663
FIGDL+ VG + + + GG G+G++
Sbjct: 228 FIGDLNGHVGTSSTSFEGVHGGFGFGIR 255
Score = 27.3 bits (59), Expect(4) = 1e-13
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD + R+VN L
Sbjct: 100 VGSLTGKLREIVDVAVRRRVNIL 122
>gb|PKU68428.1| hypothetical protein MA16_Dca021968 [Dendrobium catenatum]
Length = 410
Score = 55.8 bits (133), Expect(4) = 1e-13
Identities = 21/49 (42%), Positives = 37/49 (75%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV 451
I+ ETKWVGEK+ I+++ FKLWY+G++R NGV +++D +++++
Sbjct: 90 ILCIQETKWVGEKAKEIDSLGFKLWYSGRSRTRNGVGVIIDKSLKDNVI 138
Score = 30.8 bits (68), Expect(4) = 1e-13
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK++EL+D +I+RK+N L
Sbjct: 69 IGSLTGKLMELIDIMIHRKLNIL 91
Score = 30.4 bits (67), Expect(4) = 1e-13
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 453 KQKTVGDIILLIKLVV*EE-VTIFSAYALQVGL 548
K +GD IL +K+VV ++ V I SAYA QVGL
Sbjct: 139 KINRIGDRILALKIVVDDKIVNIISAYAPQVGL 171
Score = 26.2 bits (56), Expect(4) = 1e-13
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYG 657
GDL+ VG++ + + GGHG+G
Sbjct: 200 GDLNGHVGKEVVDFKSIHGGHGFG 223
>ref|XP_020233683.1| craniofacial development protein 2-like [Cajanus cajan]
Length = 311
Score = 52.8 bits (125), Expect(4) = 1e-13
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +2
Query: 320 ETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
ETKW+GEK+ + + FKLWYTGK R NGV I+VD + + +V K
Sbjct: 96 ETKWIGEKAKELYSSGFKLWYTGKVRARNGVGIIVDKEWRKDVVEVK 142
Score = 30.8 bits (68), Expect(4) = 1e-13
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGV 660
GDL+ VG D+ GY GGHG GV
Sbjct: 201 GDLNGHVGGDSRGYEGFHGGHGLGV 225
Score = 30.0 bits (66), Expect(4) = 1e-13
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEVT-IFSAYALQVGLVEY*K 563
K VGD I+ +KLV ++ T + SAYA Q+G E+ K
Sbjct: 142 KRVGDRIIALKLVARKDTTNVISAYAPQIGSEEHHK 177
Score = 29.6 bits (65), Expect(4) = 1e-13
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVN 306
+G L+GK +E+VDT+I R++N
Sbjct: 70 VGTLTGKAMEIVDTMIRRRIN 90
>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
Length = 1939
Score = 54.7 bits (130), Expect(4) = 2e-13
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKWVG K+ ++ FKLWYTGK +N NGV I+VD + ++ +V K
Sbjct: 527 IMCLQETKWVGAKARELDTSGFKLWYTGKVKNRNGVGIIVDKQWKKDVVDVK 578
Score = 33.1 bits (74), Expect(4) = 2e-13
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGV 660
GDL+ VGR+ GY + GGHG+GV
Sbjct: 637 GDLNGHVGREVTGYGSIHGGHGFGV 661
Score = 28.9 bits (63), Expect(4) = 2e-13
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVN 306
+G L+GK +E+VDT+ RK+N
Sbjct: 506 IGTLTGKSMEVVDTMTRRKIN 526
Score = 25.8 bits (55), Expect(4) = 2e-13
Identities = 20/39 (51%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV-*EEVTIFSAYALQVGLVEY*KRIF 572
K VGD I+ IKLVV + SAYA QVG E K F
Sbjct: 578 KRVGDRIISIKLVVEGGAFHVISAYAPQVGSDEQHKISF 616
>gb|AQK43109.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 917
Score = 52.8 bits (125), Expect(4) = 3e-13
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 121 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 172
Score = 35.4 bits (80), Expect(4) = 3e-13
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 172 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 210
Score = 27.3 bits (59), Expect(4) = 3e-13
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD + R+VN L
Sbjct: 100 VGSLTGKLREIVDVAVRRRVNIL 122
Score = 26.6 bits (57), Expect(4) = 3e-13
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 580 FIGDLSELVGRDNGGYVMLQGGHGYGVK 663
FIGDL+ VG + + + GG G+G +
Sbjct: 228 FIGDLNGHVGTSSTSFEGVHGGFGFGTR 255
>gb|ONM58670.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 933
Score = 52.8 bits (125), Expect(4) = 1e-12
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 121 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 172
Score = 35.4 bits (80), Expect(4) = 1e-12
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 172 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 210
Score = 28.9 bits (63), Expect(4) = 1e-12
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD ++ R+VN L
Sbjct: 100 VGSLTGKLREIVDVVVRRRVNIL 122
Score = 22.7 bits (47), Expect(4) = 1e-12
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGVK 663
GDL+ VG + + + GG G+G +
Sbjct: 231 GDLNGHVGTSSTSFEGVHGGFGFGTR 256
>gb|ONL92524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 52.8 bits (125), Expect(4) = 3e-12
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 3e-12
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.7 bits (60), Expect(4) = 3e-12
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD + R+VN L
Sbjct: 78 IGSLTGKLREIVDVAVRRRVNIL 100
Score = 22.7 bits (47), Expect(4) = 3e-12
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGVK 663
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|ONM55524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1038
Score = 52.8 bits (125), Expect(4) = 3e-12
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 121 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 172
Score = 35.4 bits (80), Expect(4) = 3e-12
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 172 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 210
Score = 27.3 bits (59), Expect(4) = 3e-12
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD + R+VN L
Sbjct: 100 VGSLTGKLREIVDVAVRRRVNIL 122
Score = 22.7 bits (47), Expect(4) = 3e-12
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGVK 663
GDL+ VG + + + GG G+G +
Sbjct: 231 GDLNGHVGTSSTSFEGVHGGFGFGTR 256
>gb|ONM55942.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 52.8 bits (125), Expect(4) = 3e-12
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 3e-12
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 3e-12
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 22.7 bits (47), Expect(4) = 3e-12
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGVK 663
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|ONM54584.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 52.8 bits (125), Expect(4) = 3e-12
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 3e-12
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 3e-12
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 22.7 bits (47), Expect(4) = 3e-12
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGVK 663
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|ONM52836.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 52.8 bits (125), Expect(4) = 3e-12
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 3e-12
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 3e-12
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 22.7 bits (47), Expect(4) = 3e-12
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGVK 663
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|AQL03708.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 52.8 bits (125), Expect(4) = 3e-12
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 99 ILCIQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 3e-12
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 3e-12
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 22.7 bits (47), Expect(4) = 3e-12
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGVK 663
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|AQK98364.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 52.8 bits (125), Expect(4) = 3e-12
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 3e-12
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 3e-12
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 22.7 bits (47), Expect(4) = 3e-12
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGVK 663
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|AQK92036.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 52.8 bits (125), Expect(4) = 3e-12
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 3e-12
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 3e-12
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 22.7 bits (47), Expect(4) = 3e-12
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGVK 663
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|AQK84025.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 52.8 bits (125), Expect(4) = 3e-12
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 3e-12
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 3e-12
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 22.7 bits (47), Expect(4) = 3e-12
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGVK 663
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|AQK43188.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 52.8 bits (125), Expect(4) = 3e-12
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 3e-12
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 3e-12
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 22.7 bits (47), Expect(4) = 3e-12
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGVK 663
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTNFEGVHGGFGFGTR 234
>gb|ONM06616.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 52.8 bits (125), Expect(4) = 3e-12
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 3e-12
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 3e-12
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 22.7 bits (47), Expect(4) = 3e-12
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGVK 663
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|ONM03863.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 52.8 bits (125), Expect(4) = 3e-12
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 305 IIWSHETKWVGEKSWVIENIRFKLWYTGKARNINGVRIVVDNKSEESIV*AK 460
I+ ETKW G+K+ +E FKLWYTG A N NGV +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 3e-12
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 459 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLVEY*KRIF 572
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 3e-12
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 244 LGKLSGKMIELVDTIINRKVNNL 312
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 22.7 bits (47), Expect(4) = 3e-12
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 586 GDLSELVGRDNGGYVMLQGGHGYGVK 663
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234