BLASTX nr result

ID: Ophiopogon27_contig00039148 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00039148
         (610 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY58391.1| hypothetical protein RhiirA4_512314 [Rhizophagus ...    57   6e-16
gb|PKY46516.1| hypothetical protein RhiirA4_420696 [Rhizophagus ...    57   5e-07

>gb|PKY58391.1| hypothetical protein RhiirA4_512314 [Rhizophagus irregularis]
          Length = 320

 Score = 57.4 bits (137), Expect(2) = 6e-16
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = +3

Query: 27  VIASDICVLNLDEEDPPKSLLSVVQVSIASDNAIVSDDKV 146
           ++A DICVLNLDE+D P+S LSVV + +ASDN+ VSDDKV
Sbjct: 90  MVACDICVLNLDEQDLPQSSLSVVLIGVASDNSDVSDDKV 129



 Score = 54.7 bits (130), Expect(2) = 6e-16
 Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 3/45 (6%)
 Frame = +1

Query: 154 AREYINENQNDSLQFELYHFPDENHL---SSKVSGESTLYVTGRL 279
           AREYI+   N+SL FELYHFP++ HL   SSKV   S+LYVTG L
Sbjct: 135 AREYIDNQNNESLSFELYHFPNDAHLLPTSSKVLRGSSLYVTGNL 179


>gb|PKY46516.1| hypothetical protein RhiirA4_420696 [Rhizophagus irregularis]
          Length = 140

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = +3

Query: 27  VIASDICVLNLDEEDPPKSLLSVVQVSIASDNAIVSDDKV 146
           ++A DICVLNLDE+D P+S LSVV + +ASDN+ VSDDKV
Sbjct: 90  MVACDICVLNLDEQDLPQSSLSVVLIGVASDNSDVSDDKV 129


Top