BLASTX nr result
ID: Ophiopogon27_contig00039059
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00039059
(2289 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKY37962.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz... 936 0.0
gb|PKY17591.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz... 933 0.0
gb|PKK78623.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz... 933 0.0
gb|PKC14123.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz... 933 0.0
dbj|GBC35266.1| DNA-directed RNA polymerase II subunit RPB1 [Rhi... 933 0.0
gb|KFH65903.1| DNA-directed RNA polymerase II subunit A, variant... 452 e-136
gb|KFH65904.1| DNA-directed RNA polymerase II subunit A [Mortier... 452 e-136
gb|ORX62127.1| beta and beta-prime subunits of DNA dependent RNA... 434 e-130
gb|ORX66372.1| beta and beta-prime subunits of DNA dependent RNA... 436 e-130
gb|OBZ85268.1| DNA-directed RNA polymerase II subunit rpb1, part... 431 e-129
emb|CEP17467.1| hypothetical protein [Parasitella parasitica] 431 e-129
emb|CEI98631.1| Putative DNA-directed RNA polymerase (Fragment) ... 431 e-129
emb|CEG73711.1| Putative DNA-directed RNA polymerase (Fragment) ... 429 e-128
dbj|GAN09200.1| beta and beta-prime subunits of DNA dependent RN... 430 e-128
gb|EPB83723.1| DNA-directed RNA polymerase II subunit RPB1 [Muco... 430 e-128
emb|CCJ29676.1| unnamed protein product [Pneumocystis jirovecii] 429 e-128
gb|ORZ25825.1| hypothetical protein BCR42DRAFT_401008 [Absidia r... 427 e-128
gb|KDE09572.1| hypothetical protein MVLG_00467 [Microbotryum lyc... 417 e-127
emb|CDH50425.1| beta and beta-prime subunits of dna dependentrna... 427 e-127
emb|SAL97750.1| hypothetical protein [Absidia glauca] 426 e-127
>gb|PKY37962.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
Length = 1860
Score = 936 bits (2419), Expect = 0.0
Identities = 470/508 (92%), Positives = 472/508 (92%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY
Sbjct: 1187 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 1246
Query: 182 QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG 361
QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG
Sbjct: 1247 QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG 1306
Query: 362 STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI 541
STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI
Sbjct: 1307 STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI 1366
Query: 542 QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF 721
QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF
Sbjct: 1367 QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF 1426
Query: 722 DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEV 901
DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE+
Sbjct: 1427 DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEI 1486
Query: 902 DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP 1081
DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP
Sbjct: 1487 DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP 1546
Query: 1082 ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXXXXXXXXVLEAGGKSVSVG 1261
ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYD VLEAGGKSVSVG
Sbjct: 1547 ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDSPGPSSPAFSPAFSPVLEAGGKSVSVG 1606
Query: 1262 GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSFXXXXXXXXXXXXXXXXX 1441
GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSF
Sbjct: 1607 GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSFTPQSPAYSPTSPSYSPS 1666
Query: 1442 XXXGNFGGATMSASSTINASQSAYRQQA 1525
GNFGGATM+ASSTINASQS YRQQA
Sbjct: 1667 SPTGNFGGATMNASSTINASQSVYRQQA 1694
Score = 65.9 bits (159), Expect = 4e-07
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 1883 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1975
NYAPSGYSPSGINAATYSPNSLLSQSTINSN
Sbjct: 1814 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1844
>gb|PKY17591.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
Length = 1861
Score = 933 bits (2411), Expect = 0.0
Identities = 471/509 (92%), Positives = 473/509 (92%), Gaps = 1/509 (0%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY
Sbjct: 1187 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 1246
Query: 182 QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG 361
QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG
Sbjct: 1247 QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG 1306
Query: 362 STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI 541
STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI
Sbjct: 1307 STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI 1366
Query: 542 QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF 721
QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF
Sbjct: 1367 QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF 1426
Query: 722 DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEV 901
DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE+
Sbjct: 1427 DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEI 1486
Query: 902 DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP 1081
DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP
Sbjct: 1487 DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP 1546
Query: 1082 ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXXXXXXXXVLEAGGKSVSVG 1261
ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYD VLEAGGKSVSVG
Sbjct: 1547 ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDSPGPSSPAFSPAFSPVLEAGGKSVSVG 1606
Query: 1262 GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSFXXXXXXXXXXXXXXXXX 1441
GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSF
Sbjct: 1607 GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSFTPQSPAYSPTSPSYSPS 1666
Query: 1442 XXXGNFGGATMSASSTINASQSAY-RQQA 1525
GNFGGATM+ASSTINASQSAY RQQA
Sbjct: 1667 SPTGNFGGATMNASSTINASQSAYNRQQA 1695
Score = 65.9 bits (159), Expect = 4e-07
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 1883 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1975
NYAPSGYSPSGINAATYSPNSLLSQSTINSN
Sbjct: 1815 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1845
>gb|PKK78623.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
Length = 1861
Score = 933 bits (2411), Expect = 0.0
Identities = 471/509 (92%), Positives = 473/509 (92%), Gaps = 1/509 (0%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY
Sbjct: 1187 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 1246
Query: 182 QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG 361
QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG
Sbjct: 1247 QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG 1306
Query: 362 STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI 541
STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI
Sbjct: 1307 STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI 1366
Query: 542 QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF 721
QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF
Sbjct: 1367 QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF 1426
Query: 722 DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEV 901
DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE+
Sbjct: 1427 DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEI 1486
Query: 902 DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP 1081
DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP
Sbjct: 1487 DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP 1546
Query: 1082 ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXXXXXXXXVLEAGGKSVSVG 1261
ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYD VLEAGGKSVSVG
Sbjct: 1547 ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDSPGPSSPAFSPAFSPVLEAGGKSVSVG 1606
Query: 1262 GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSFXXXXXXXXXXXXXXXXX 1441
GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSF
Sbjct: 1607 GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSFTPQSPAYSPTSPSYSPS 1666
Query: 1442 XXXGNFGGATMSASSTINASQSAY-RQQA 1525
GNFGGATM+ASSTINASQSAY RQQA
Sbjct: 1667 SPTGNFGGATMNASSTINASQSAYNRQQA 1695
Score = 65.9 bits (159), Expect = 4e-07
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 1883 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1975
NYAPSGYSPSGINAATYSPNSLLSQSTINSN
Sbjct: 1815 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1845
>gb|PKC14123.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
Length = 1861
Score = 933 bits (2411), Expect = 0.0
Identities = 471/509 (92%), Positives = 473/509 (92%), Gaps = 1/509 (0%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY
Sbjct: 1187 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 1246
Query: 182 QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG 361
QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG
Sbjct: 1247 QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG 1306
Query: 362 STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI 541
STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI
Sbjct: 1307 STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI 1366
Query: 542 QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF 721
QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF
Sbjct: 1367 QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF 1426
Query: 722 DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEV 901
DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE+
Sbjct: 1427 DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEI 1486
Query: 902 DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP 1081
DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP
Sbjct: 1487 DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP 1546
Query: 1082 ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXXXXXXXXVLEAGGKSVSVG 1261
ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYD VLEAGGKSVSVG
Sbjct: 1547 ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDSPGPSSPAFSPAFSPVLEAGGKSVSVG 1606
Query: 1262 GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSFXXXXXXXXXXXXXXXXX 1441
GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSF
Sbjct: 1607 GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSFTPQSPAYSPTSPSYSPS 1666
Query: 1442 XXXGNFGGATMSASSTINASQSAY-RQQA 1525
GNFGGATM+ASSTINASQSAY RQQA
Sbjct: 1667 SPTGNFGGATMNASSTINASQSAYNRQQA 1695
Score = 65.9 bits (159), Expect = 4e-07
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 1883 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1975
NYAPSGYSPSGINAATYSPNSLLSQSTINSN
Sbjct: 1815 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1845
>dbj|GBC35266.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis
DAOM 181602]
gb|PKC73289.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
gb|POG69694.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis
DAOM 181602=DAOM 197198]
Length = 1861
Score = 933 bits (2411), Expect = 0.0
Identities = 471/509 (92%), Positives = 473/509 (92%), Gaps = 1/509 (0%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY
Sbjct: 1187 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 1246
Query: 182 QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG 361
QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG
Sbjct: 1247 QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG 1306
Query: 362 STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI 541
STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI
Sbjct: 1307 STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI 1366
Query: 542 QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF 721
QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF
Sbjct: 1367 QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF 1426
Query: 722 DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEV 901
DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE+
Sbjct: 1427 DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEI 1486
Query: 902 DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP 1081
DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP
Sbjct: 1487 DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMTP 1546
Query: 1082 ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXXXXXXXXVLEAGGKSVSVG 1261
ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYD VLEAGGKSVSVG
Sbjct: 1547 ALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDSPGPSSPAFSPAFSPVLEAGGKSVSVG 1606
Query: 1262 GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSFXXXXXXXXXXXXXXXXX 1441
GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSF
Sbjct: 1607 GIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSSFTPQSPAYSPTSPSYSPS 1666
Query: 1442 XXXGNFGGATMSASSTINASQSAY-RQQA 1525
GNFGGATM+ASSTINASQSAY RQQA
Sbjct: 1667 SPTGNFGGATMNASSTINASQSAYNRQQA 1695
Score = 65.9 bits (159), Expect = 4e-07
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 1883 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1975
NYAPSGYSPSGINAATYSPNSLLSQSTINSN
Sbjct: 1815 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1845
>gb|KFH65903.1| DNA-directed RNA polymerase II subunit A, variant [Mortierella
verticillata NRRL 6337]
Length = 1794
Score = 452 bits (1163), Expect = e-136
Identities = 254/477 (53%), Positives = 318/477 (66%), Gaps = 14/477 (2%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
++++RAK++Q +EYT LK VT TEI Y+PD T IE D++FV+ YYAM D D +
Sbjct: 1123 RNMERAKQVQVALEYTNLKKVTSSTEIHYDPDPENTNIEEDQDFVQAYYAMPDDDLHANR 1182
Query: 182 QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG 361
SPW+LR ELN +MLDKKL M V NKI E+F +D+ I +DDNA+ +IRCRIISE
Sbjct: 1183 TSPWLLRIELNRKMMLDKKLTMADVSNKISEDFQRDLMCICSDDNAEKLIIRCRIISEEA 1242
Query: 362 STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI 541
+ K +E EEDVFLK++E+++LS+IGLRGIK I+RVY+++ K IY+ + G
Sbjct: 1243 ADKQTDVQE-----EEDVFLKKIESSLLSSIGLRGIKNIARVYMVEKKK--IYIKNDGTF 1295
Query: 542 QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF 721
+ EW LET G+NL+ V+ ++VD TRTYSNNC E+M VLGIEA R ALLKELRGVIEF
Sbjct: 1296 GSQMEWYLETSGSNLKAVMCEEDVDSTRTYSNNCGEVMSVLGIEAARQALLKELRGVIEF 1355
Query: 722 DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEV 901
DGSYVNYRHL+LLCDVMT RGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE+
Sbjct: 1356 DGSYVNYRHLSLLCDVMTHRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEL 1415
Query: 902 DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDY-----RRS 1066
DDCRGVAENIMLGQ+APLGTG+FD+ LD +L T ++ G S
Sbjct: 1416 DDCRGVAENIMLGQLAPLGTGEFDLMLDEKMLSTVVEGPRPGMMGMGMGMGMGLSSDNLS 1475
Query: 1067 GNMTPALGGMTP----FTSARTPSHFAMTPMY--GAKTPLSSYDXXXXXXXXXXXXXXXV 1228
MTP G +P F+ +P +PM G+ +PL +
Sbjct: 1476 SQMTP-YDGRSPQYVDFSHPGSPMDAVFSPMVNSGSSSPLGASSWSDPSSPFGATSPGYS 1534
Query: 1229 LEAGGKSVSVGGIYSYQTSP-YNTGSPSYGPTSPQYSPSSP--APTAFAHSPGGSSF 1390
+ G S S Y TSP Y+ SPSY PTSP YSP+SP +PT+ ++SP S+
Sbjct: 1535 PASPGYSPSSP---MYATSPGYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 1588
>gb|KFH65904.1| DNA-directed RNA polymerase II subunit A [Mortierella verticillata
NRRL 6337]
Length = 1825
Score = 452 bits (1163), Expect = e-136
Identities = 254/477 (53%), Positives = 318/477 (66%), Gaps = 14/477 (2%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
++++RAK++Q +EYT LK VT TEI Y+PD T IE D++FV+ YYAM D D +
Sbjct: 1154 RNMERAKQVQVALEYTNLKKVTSSTEIHYDPDPENTNIEEDQDFVQAYYAMPDDDLHANR 1213
Query: 182 QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG 361
SPW+LR ELN +MLDKKL M V NKI E+F +D+ I +DDNA+ +IRCRIISE
Sbjct: 1214 TSPWLLRIELNRKMMLDKKLTMADVSNKISEDFQRDLMCICSDDNAEKLIIRCRIISEEA 1273
Query: 362 STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI 541
+ K +E EEDVFLK++E+++LS+IGLRGIK I+RVY+++ K IY+ + G
Sbjct: 1274 ADKQTDVQE-----EEDVFLKKIESSLLSSIGLRGIKNIARVYMVEKKK--IYIKNDGTF 1326
Query: 542 QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF 721
+ EW LET G+NL+ V+ ++VD TRTYSNNC E+M VLGIEA R ALLKELRGVIEF
Sbjct: 1327 GSQMEWYLETSGSNLKAVMCEEDVDSTRTYSNNCGEVMSVLGIEAARQALLKELRGVIEF 1386
Query: 722 DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEV 901
DGSYVNYRHL+LLCDVMT RGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE+
Sbjct: 1387 DGSYVNYRHLSLLCDVMTHRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEL 1446
Query: 902 DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDY-----RRS 1066
DDCRGVAENIMLGQ+APLGTG+FD+ LD +L T ++ G S
Sbjct: 1447 DDCRGVAENIMLGQLAPLGTGEFDLMLDEKMLSTVVEGPRPGMMGMGMGMGMGLSSDNLS 1506
Query: 1067 GNMTPALGGMTP----FTSARTPSHFAMTPMY--GAKTPLSSYDXXXXXXXXXXXXXXXV 1228
MTP G +P F+ +P +PM G+ +PL +
Sbjct: 1507 SQMTP-YDGRSPQYVDFSHPGSPMDAVFSPMVNSGSSSPLGASSWSDPSSPFGATSPGYS 1565
Query: 1229 LEAGGKSVSVGGIYSYQTSP-YNTGSPSYGPTSPQYSPSSP--APTAFAHSPGGSSF 1390
+ G S S Y TSP Y+ SPSY PTSP YSP+SP +PT+ ++SP S+
Sbjct: 1566 PASPGYSPSSP---MYATSPGYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 1619
>gb|ORX62127.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
[Hesseltinella vesiculosa]
Length = 1674
Score = 434 bits (1117), Expect = e-130
Identities = 249/485 (51%), Positives = 320/485 (65%), Gaps = 22/485 (4%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
++I+ AKE+Q +E+TTL+ VT EI+Y+PD T IE D +FV+ YY +ED ++ S
Sbjct: 1087 RNIELAKEVQVRLEHTTLQKVTSSAEIYYDPDPRNTIIEEDVDFVDTYYQLEDDNAASVT 1146
Query: 182 Q-SPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEP 358
+ SPW+LR ELN +M+DK+L++ V KI E F D+H I +D+N++ VIRCR++S+
Sbjct: 1147 RVSPWLLRIELNRGMMIDKRLNITEVVQKISEEFKNDLHIIGSDENSEKLVIRCRVMSDE 1206
Query: 359 GSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGL 538
KD +E + EED FL+++E++MLS+I LRGI GI +VY++D + + L+D GL
Sbjct: 1207 QDDKDADGDEV--RTEEDTFLRKLESSMLSSINLRGIPGIRKVYIVD--RREMTLNDQGL 1262
Query: 539 IQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIE 718
+ + W L+TDGTNLQ+V+ D VD TRTYSNN VEIM+VLGIEATR ALLKELR VIE
Sbjct: 1263 FDQNSIWGLDTDGTNLQQVMCQDGVDATRTYSNNPVEIMEVLGIEATRKALLKELRNVIE 1322
Query: 719 FDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 898
FDGSYVNYRHLALLCDVMTSRGHLMAITRHGINR ETGALMRCSFEETVEIL+EAAA GE
Sbjct: 1323 FDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRTETGALMRCSFEETVEILLEAAASGE 1382
Query: 899 VDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS----IVKAKEGYDYRRS 1066
+DDCRGVAENIMLGQ+APLGTG+FDV LD +L+ DS + G D+
Sbjct: 1383 LDDCRGVAENIMLGQMAPLGTGEFDVMLDEDMLKLVPQ--DSRHYPLMANGMAGADF--P 1438
Query: 1067 GNMTPALGGMTP---------------FTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXX 1201
G TP G MTP F++ TPS +PM + SS
Sbjct: 1439 GYATPNAGFMTPSMATPYDTRSPDWVDFSAPSTPSEPMFSPMGNSGAASSS-----IGSS 1493
Query: 1202 XXXXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSP--APTAFAHSP 1375
+ G S S G YS + Y+ SPSY P+SP YSPSSP +P++ ++SP
Sbjct: 1494 PWRGDLSPYAASPGYSPSSPG-YSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSP 1552
Query: 1376 GGSSF 1390
S+
Sbjct: 1553 SSPSY 1557
>gb|ORX66372.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
[Linderina pennispora]
Length = 1823
Score = 436 bits (1121), Expect = e-130
Identities = 250/482 (51%), Positives = 323/482 (67%), Gaps = 24/482 (4%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
++++RAK++Q IE+TTL VT TEIWY+PD+ T I+ DR+FV+ YY M D+
Sbjct: 1145 RNLERAKDVQVAIEHTTLAKVTAATEIWYDPDVQDTIIDEDRDFVQAYYEMPDEQIPVET 1204
Query: 182 QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEPG 361
SPW+LR ELN ++M+DKKL M V NK+ E F++D+ I NDDN++ V+RCRII+ G
Sbjct: 1205 ISPWLLRIELNRNMMIDKKLSMTEVTNKLTEVFNRDLLCICNDDNSEKLVVRCRIINAEG 1264
Query: 362 STKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGLI 541
KD D E+G ++EEDVFLKR+E +ML N+ LRGI GI RVYL++ +K I ++G
Sbjct: 1265 MNKDD-DLEDG-QMEEDVFLKRIETHMLDNVVLRGIPGIKRVYLVEKDK--IITKETGEY 1320
Query: 542 QKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIEF 721
K+ EW +ETDG NL+EV+ DNVD RTYSN+ +EI++VLGIEA RAA+LKE+R VIEF
Sbjct: 1321 DKQTEWVIETDGINLREVMWQDNVDPKRTYSNHPIEILEVLGIEAGRAAILKEVRNVIEF 1380
Query: 722 DGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGEV 901
DGSYVNYRHL+LL D+MTSRG L AITRHGINRAETG LMRC+FEETVEILM+AAAVG +
Sbjct: 1381 DGSYVNYRHLSLLVDLMTSRGILTAITRHGINRAETGPLMRCTFEETVEILMDAAAVGAI 1440
Query: 902 DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLR-------------TTAPAGDSSIVKAK 1042
DDCRGVAENI+LGQ+APLGTG FDV LD +L AP+G + V A
Sbjct: 1441 DDCRGVAENILLGQLAPLGTGSFDVMLDDEMLSQVVIDPRAQGFDLANAPSGVPAYVLAG 1500
Query: 1043 EGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXXXXXXX 1222
SG+M+P MTP+ S R+P + M G +P+S+
Sbjct: 1501 SP---GPSGSMSPQ---MTPYDS-RSPDYVGMG---GPGSPVSA-------------MFS 1537
Query: 1223 XVLEAGGKSVSVGGIYSYQ--------TSP-YNTGSPSYGPTSPQYSPSSP--APTAFAH 1369
++++G S G Y TSP YN SPSY PTSPQYSP+SP +PT+ ++
Sbjct: 1538 PIVDSGATSPGWNGASPYSPASPSYSPTSPTYNATSPSYSPTSPQYSPTSPSYSPTSPSY 1597
Query: 1370 SP 1375
SP
Sbjct: 1598 SP 1599
>gb|OBZ85268.1| DNA-directed RNA polymerase II subunit rpb1, partial [Choanephora
cucurbitarum]
Length = 1628
Score = 431 bits (1108), Expect = e-129
Identities = 244/486 (50%), Positives = 314/486 (64%), Gaps = 23/486 (4%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
++I+ AKE+Q +E+TTL+ VT TEI+Y+PD T IE D +FV+ YY +ED +S
Sbjct: 1141 RNIELAKEVQVNLEHTTLQKVTSVTEIYYDPDPRNTVIEEDVDFVDTYYQLEDDNSAFVT 1200
Query: 182 Q-SPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEP 358
+ SPW+LR ELN +M+DK+L++ V KI E F D+H I +D+N++ ++RCR++ +
Sbjct: 1201 RVSPWLLRIELNRGMMIDKRLNITEVVQKISEEFRNDLHVIGSDENSEKLIVRCRVMMDE 1260
Query: 359 GSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGL 538
KD DEE + EED FL+++E +ML +I LRGI GI +VY+++ T L + G+
Sbjct: 1261 HEDKDMDDEEG--RTEEDTFLRKLEASMLGSINLRGIPGIKKVYIVERKNTT--LTEKGV 1316
Query: 539 IQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIE 718
+ EW L+TDG NLQ+V+ VD TRTYSNN VEIM+VLGIEATR ALLKELR VIE
Sbjct: 1317 FETTTEWGLDTDGINLQQVMCQHGVDETRTYSNNTVEIMEVLGIEATRKALLKELRNVIE 1376
Query: 719 FDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 898
FDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE
Sbjct: 1377 FDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 1436
Query: 899 VDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMT 1078
+DDCRGVAENIMLGQ+APLGTG+FDV LD +L++ ++ G +G T
Sbjct: 1437 LDDCRGVAENIMLGQMAPLGTGEFDVMLDEEMLQSVPQDHRQNLQMGMAG---DTAGFAT 1493
Query: 1079 PALGGMTP---------------FTSARTPSHFAMTPM--YGAKTPLSS---YDXXXXXX 1198
P G MTP F+ +PS +PM GA L+S D
Sbjct: 1494 PGPGYMTPNMATPYDTRSPDWVDFSQPSSPSEPMFSPMGNSGAGGSLASPWRGDLSPYAQ 1553
Query: 1199 XXXXXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSP--APTAFAHS 1372
S + YS + Y+ SPSY PTSP YSP+SP +PT+ ++S
Sbjct: 1554 SPGYSPTSPGYSPSSPSYAASPGYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1613
Query: 1373 PGGSSF 1390
P S+
Sbjct: 1614 PTSPSY 1619
>emb|CEP17467.1| hypothetical protein [Parasitella parasitica]
Length = 1768
Score = 431 bits (1109), Expect = e-129
Identities = 246/482 (51%), Positives = 315/482 (65%), Gaps = 19/482 (3%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
++I+ AKE+Q +E+TTL+ VT TEI+Y+PD T IE D +FV+ YY +ED +S
Sbjct: 1142 RNIELAKEVQVNLEHTTLQKVTSVTEIYYDPDPRNTIIEEDADFVDTYYQLEDDNSAFVT 1201
Query: 182 Q-SPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEP 358
+ SPW+LR ELN +M+DK+L++ V KI E F D+H + +D+N++ VIRCR++ +
Sbjct: 1202 RVSPWLLRIELNRGMMIDKRLNITEVVQKISEEFRSDLHVMGSDENSEKLVIRCRVMMDE 1261
Query: 359 GSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGL 538
KD +DEE+ EED FL+++E +ML +I LRGI GI +VY+++ T L++ G
Sbjct: 1262 NEDKD-MDEEDARS-EEDTFLRKLEASMLGSINLRGIPGIRKVYIVERKNT--ILNEKGN 1317
Query: 539 IQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIE 718
+ EW L+TDG NLQEV+ VD TRTYSNN VEIM+VLGIEATR ALLKELR VIE
Sbjct: 1318 FETTTEWGLDTDGINLQEVMCQYGVDETRTYSNNTVEIMEVLGIEATRKALLKELRNVIE 1377
Query: 719 FDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 898
FDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE
Sbjct: 1378 FDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 1437
Query: 899 VDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMT 1078
+DDCRGVAENIMLGQ+APLGTG+FDV LD +L++ ++ G +G T
Sbjct: 1438 LDDCRGVAENIMLGQMAPLGTGEFDVMLDEEMLQSVPQDHRQNLQMGVAG---DVAGFAT 1494
Query: 1079 PALGGMTP---------------FTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXXXX 1213
P G MTP F+ +PS +PM + T S
Sbjct: 1495 PGPGYMTPNMATPYDTRSPDWVDFSQPSSPSEPMFSPMGNSGTATSMASPWRGDLSPYAH 1554
Query: 1214 XXXXVLEAGGKSVSVGGIYSYQTSP-YNTGSPSYGPTSPQYSPSSP--APTAFAHSPGGS 1384
+ G S S SY SP Y+ SP+Y PTSP YSP+SP +PT+ ++SP
Sbjct: 1555 SPGYSPTSPGYSPSSP---SYAASPGYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1611
Query: 1385 SF 1390
S+
Sbjct: 1612 SY 1613
>emb|CEI98631.1| Putative DNA-directed RNA polymerase (Fragment) [Rhizopus
microsporus]
Length = 1765
Score = 431 bits (1108), Expect = e-129
Identities = 245/485 (50%), Positives = 316/485 (65%), Gaps = 22/485 (4%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDS-ISG 178
++I+ AKE+Q +E+TTL+ +T EI+Y+PD T I D +FVE YY++ED +S
Sbjct: 1188 RNIELAKEVQVKLEHTTLQKLTSVAEIYYDPDPRQTVIAEDVDFVETYYSLEDDNSPFVT 1247
Query: 179 YQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEP 358
SPW+LR ELN +M+DK +++ + KI E F D+H + +DDN++ +VIRCR++ +
Sbjct: 1248 RVSPWLLRLELNRAMMVDKGIYVTDIVQKISEEFRHDLHVMGSDDNSEKQVIRCRVMLDE 1307
Query: 359 GSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGL 538
ID+EN K EED FL+++E++MLS+I L GI GI +VY+++ T L+D G
Sbjct: 1308 NEKNAEIDDEN--KPEEDTFLRKLESSMLSSINLCGIPGIKKVYIVERKNT--VLNDKGS 1363
Query: 539 IQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIE 718
+ EW L+TDGTNLQEV+ + VD TRTYSNN VEIM+VLGIEATR ALLKELR VIE
Sbjct: 1364 FETTTEWGLDTDGTNLQEVMCQEGVDETRTYSNNTVEIMEVLGIEATRKALLKELRNVIE 1423
Query: 719 FDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 898
FDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE
Sbjct: 1424 FDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 1483
Query: 899 VDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMT 1078
+DDC+GVAENIMLGQ+APLGTG+FD+ LD LL+T ++ + G +G T
Sbjct: 1484 LDDCKGVAENIMLGQMAPLGTGEFDIVLDEELLQTVPQDHRQNL---QMGITGDVAGFAT 1540
Query: 1079 PALGGMTP---------------FTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXXXX 1213
P G MTP F+ +PS PM+ +P+ +
Sbjct: 1541 PGPGYMTPGVATPYDTRSPDWVDFSQPSSPSE----PMF---SPMGNTGAAGIASPWRGD 1593
Query: 1214 XXXXVLEAGGKSVSVG---GIYSYQTSP-YNTGSPSYGPTSPQYSPSSP--APTAFAHSP 1375
G S G SY SP Y+ SPSY PTSP YSP+SP +PT+ ++SP
Sbjct: 1594 LSPYAQSPGYSPTSPGYSPSSPSYAASPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSP 1653
Query: 1376 GGSSF 1390
S+
Sbjct: 1654 TSPSY 1658
>emb|CEG73711.1| Putative DNA-directed RNA polymerase (Fragment) [Rhizopus
microsporus]
Length = 1692
Score = 429 bits (1104), Expect = e-128
Identities = 244/480 (50%), Positives = 314/480 (65%), Gaps = 22/480 (4%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDS-ISG 178
++I+ AKE+Q +E+TTL+ +T EI+Y+PD T I D +FVE YY++ED +S
Sbjct: 1141 RNIELAKEVQVKLEHTTLQKLTSVAEIYYDPDPRQTVIAEDVDFVETYYSLEDDNSPFVT 1200
Query: 179 YQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEP 358
SPW+LR ELN +M+DK +++ + KI E F D+H + +DDN++ +VIRCR++ +
Sbjct: 1201 RVSPWLLRLELNRAMMVDKGIYVTDIVQKISEEFRHDLHVMGSDDNSEKQVIRCRVMLDE 1260
Query: 359 GSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGL 538
ID+EN K EED FL+++E++MLS+I L GI GI +VY+++ T L+D G
Sbjct: 1261 NEKNAEIDDEN--KPEEDTFLRKLESSMLSSINLCGIPGIKKVYIVERKNT--VLNDKGS 1316
Query: 539 IQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIE 718
+ EW L+TDGTNLQEV+ + VD TRTYSNN VEIM+VLGIEATR ALLKELR VIE
Sbjct: 1317 FETTTEWGLDTDGTNLQEVMCQEGVDETRTYSNNTVEIMEVLGIEATRKALLKELRNVIE 1376
Query: 719 FDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 898
FDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE
Sbjct: 1377 FDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 1436
Query: 899 VDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMT 1078
+DDC+GVAENIMLGQ+APLGTG+FD+ LD LL+T ++ + G +G T
Sbjct: 1437 LDDCKGVAENIMLGQMAPLGTGEFDIVLDEELLQTVPQDHRQNL---QMGITGDVAGFAT 1493
Query: 1079 PALGGMTP---------------FTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXXXX 1213
P G MTP F+ +PS PM+ +P+ +
Sbjct: 1494 PGPGYMTPGVATPYDTRSPDWVDFSQPSSPSE----PMF---SPMGNTGAAGIASPWRGD 1546
Query: 1214 XXXXVLEAGGKSVSVG---GIYSYQTSP-YNTGSPSYGPTSPQYSPSSP--APTAFAHSP 1375
G S G SY SP Y+ SPSY PTSP YSP+SP +PT+ ++SP
Sbjct: 1547 LSPYAQSPGYSPTSPGYSPSSPSYAASPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSP 1606
>dbj|GAN09200.1| beta and beta-prime subunits of DNA dependent RNA-polymerase [Mucor
ambiguus]
Length = 1771
Score = 430 bits (1106), Expect = e-128
Identities = 246/486 (50%), Positives = 316/486 (65%), Gaps = 23/486 (4%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
++I+ AKE+Q +E+TTL+ VT TEI+Y+PD T IE D +FV+ YY +ED +S
Sbjct: 1142 RNIELAKEVQVNLEHTTLQKVTSVTEIYYDPDPRNTIIEEDADFVDTYYQLEDDNSAFVT 1201
Query: 182 Q-SPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEP 358
+ SPW+LR ELN +M+DK+L++ V KI E F D+H + +D+N++ VIRCR++ +
Sbjct: 1202 RVSPWLLRIELNRGMMIDKRLNITEVVQKISEEFRSDLHVMGSDENSEKLVIRCRVMMDE 1261
Query: 359 GSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGL 538
KD +DEE+ EED FL+++E +ML +I LRGI GI +VY+++ T L++ G
Sbjct: 1262 NEDKD-MDEEDARS-EEDTFLRKLEASMLGSINLRGIPGIRKVYIVERKNT--ILNEKGN 1317
Query: 539 IQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIE 718
+ EW L+TDG NLQEV+ VD TRTYSNN VEIM+VLGIEATR ALLKELR VIE
Sbjct: 1318 FETTTEWGLDTDGINLQEVMCQYGVDETRTYSNNTVEIMEVLGIEATRKALLKELRNVIE 1377
Query: 719 FDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 898
FDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE
Sbjct: 1378 FDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 1437
Query: 899 VDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMT 1078
+DDCRGVAENIMLGQ+APLGTG+FDV LD +L++ ++ G +G T
Sbjct: 1438 LDDCRGVAENIMLGQMAPLGTGEFDVMLDEEMLQSVPQDHRQNMQMGVAG---DVAGFAT 1494
Query: 1079 PALGGMTP---------------FTSARTPSHFAMTPM--YGAKTPLSS---YDXXXXXX 1198
P G MTP F+ +PS +PM GA T ++S D
Sbjct: 1495 PGPGYMTPNMATPYDTRSPEWADFSQPSSPSEPMFSPMGNSGAATSIASPWRGDLSPYAQ 1554
Query: 1199 XXXXXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSP--APTAFAHS 1372
S + YS + Y+ SPSY PTSP YSP+SP +PT+ ++S
Sbjct: 1555 SPGYSPTSPGYSPSSPSYAASPGYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1614
Query: 1373 PGGSSF 1390
P S+
Sbjct: 1615 PTSPSY 1620
>gb|EPB83723.1| DNA-directed RNA polymerase II subunit RPB1 [Mucor circinelloides f.
circinelloides 1006PhL]
Length = 1771
Score = 430 bits (1106), Expect = e-128
Identities = 246/486 (50%), Positives = 316/486 (65%), Gaps = 23/486 (4%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
++I+ AKE+Q +E+TTL+ VT TEI+Y+PD T IE D +FV+ YY +ED +S
Sbjct: 1142 RNIELAKEVQVNLEHTTLQKVTSVTEIYYDPDPRNTIIEEDADFVDTYYQLEDDNSAFVT 1201
Query: 182 Q-SPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEP 358
+ SPW+LR ELN +M+DK+L++ V KI E F D+H + +D+N++ VIRCR++ +
Sbjct: 1202 RVSPWLLRIELNRGMMIDKRLNITEVVQKISEEFRSDLHVMGSDENSEKLVIRCRVMMDE 1261
Query: 359 GSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGL 538
KD +DEE+ EED FL+++E +ML +I LRGI GI +VY+++ T L++ G
Sbjct: 1262 NEDKD-MDEEDARS-EEDTFLRKLEASMLGSINLRGIPGIRKVYIVERKNT--ILNEKGN 1317
Query: 539 IQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIE 718
+ EW L+TDG NLQEV+ VD TRTYSNN VEIM+VLGIEATR ALLKELR VIE
Sbjct: 1318 FETTTEWGLDTDGINLQEVMCQYGVDETRTYSNNTVEIMEVLGIEATRKALLKELRNVIE 1377
Query: 719 FDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 898
FDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE
Sbjct: 1378 FDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 1437
Query: 899 VDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMT 1078
+DDCRGVAENIMLGQ+APLGTG+FDV LD +L++ ++ G +G T
Sbjct: 1438 LDDCRGVAENIMLGQMAPLGTGEFDVMLDEEMLQSVPQDHRQNMQMGVAG---DVAGFAT 1494
Query: 1079 PALGGMTP---------------FTSARTPSHFAMTPM--YGAKTPLSS---YDXXXXXX 1198
P G MTP F+ +PS +PM GA T ++S D
Sbjct: 1495 PGPGYMTPNMATPYDTRSPDWVDFSQPSSPSEPMFSPMGNSGAATSIASPWRGDLSPYAQ 1554
Query: 1199 XXXXXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSP--APTAFAHS 1372
S + YS + Y+ SPSY PTSP YSP+SP +PT+ ++S
Sbjct: 1555 SPGYSPTSPGYSPSSPSYAASPGYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1614
Query: 1373 PGGSSF 1390
P S+
Sbjct: 1615 PTSPSY 1620
>emb|CCJ29676.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1762
Score = 429 bits (1104), Expect = e-128
Identities = 251/508 (49%), Positives = 317/508 (62%), Gaps = 50/508 (9%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
KD++ AK++Q IE+TTLKTVT TEI+Y+PD T IE DR FVE ++A+ D+D +
Sbjct: 1131 KDMESAKQVQTAIEHTTLKTVTSVTEIFYDPDPQQTVIEEDRTFVEAFFAIPDEDVEANL 1190
Query: 182 --QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISE 355
QS W+LR EL+ MLDKKL M V KI E+F KD+ IW++DNAD VIRCR+I +
Sbjct: 1191 HRQSSWLLRLELDRAKMLDKKLSMSDVAAKITESFHKDLFVIWSEDNADKLVIRCRVIKD 1250
Query: 356 PGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSG 535
+ D D++ IEEDV LKR+E++ML +I LRG+ ISRV++++ +KT +Y ++G
Sbjct: 1251 EEKSFDDDDDD---PIEEDVLLKRIESHMLESISLRGVPNISRVFMME-HKT-VYQSENG 1305
Query: 536 LIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVI 715
+ EW LETDG NL EV+ +NVD RTYSN+ VEI+QVLGIEATRAALLKELR VI
Sbjct: 1306 EFVRGEEWVLETDGINLAEVMAVENVDPRRTYSNSFVEILQVLGIEATRAALLKELRNVI 1365
Query: 716 EFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVG 895
EFDGSYVNYRHL+LL D MTSRGHLMAITRHGINRAETG LMRCSFEETVEILMEAAA G
Sbjct: 1366 EFDGSYVNYRHLSLLADTMTSRGHLMAITRHGINRAETGVLMRCSFEETVEILMEAAAAG 1425
Query: 896 EVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLR------------------------- 1000
E+DDCRG++ENIMLGQ+APLGTG+FDV LD +L
Sbjct: 1426 EMDDCRGISENIMLGQLAPLGTGEFDVILDEDMLNEVVVDRQMFRGASAALGKTPLYDDQ 1485
Query: 1001 -----TTAPAGDSSIVKAKEGYDYR---RSGNMTPALGGMTPF----------TSARTPS 1126
+ +P DS V + +G + +SG+ TP GG T + S ++P
Sbjct: 1486 ATPYDSRSPMSDSGYVGSSDGAAFSPLVQSGSETP--GGFTEYGGGFGVSPYGASLQSPG 1543
Query: 1127 HFAMTPMYGAKTPLSSYDXXXXXXXXXXXXXXXVLEAGGKSVSVGGI---YSYQTSPYNT 1297
+ +P G SY S I YS + Y+
Sbjct: 1544 YHPFSPFSGTSPVSPSYSPASVFSPTSPQIAGMSPSFSPTSPMCSPISPAYSPTSPAYSP 1603
Query: 1298 GSPSYGPTSPQYSPSSP--APTAFAHSP 1375
SPSY PTSP YSP+SP +PT+ A+SP
Sbjct: 1604 TSPSYSPTSPSYSPTSPRFSPTSPAYSP 1631
>gb|ORZ25825.1| hypothetical protein BCR42DRAFT_401008 [Absidia repens]
Length = 1633
Score = 427 bits (1098), Expect = e-128
Identities = 242/488 (49%), Positives = 317/488 (64%), Gaps = 25/488 (5%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDS-ISG 178
++I+ AKE+Q +E+TTL+ VT +EI+Y+PD +T IE D +FV+ YY +ED +S +
Sbjct: 1064 RNIELAKEVQVHLEHTTLQKVTSASEIYYDPDPRSTIIEEDADFVDTYYQLEDDNSPVVT 1123
Query: 179 YQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEP 358
SPW+LR ELN +M+DK+L++ V KI + F D+H I +D+N++ +IRCR++S+
Sbjct: 1124 RVSPWLLRIELNRGMMIDKRLNITEVVQKISDEFKNDLHVIGSDENSEKLIIRCRVMSDE 1183
Query: 359 GSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGL 538
KD DE+ + EED FL+++E++MLS+I LRGI I +VY+++ T L+ G
Sbjct: 1184 SEEKDMDDEDT--RTEEDTFLRKLESSMLSSINLRGIPRIQKVYIVERKDT--ILNSQGK 1239
Query: 539 IQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIE 718
++ EW L+TDG NLQ+V+ VD RTYSNN EIM+VLGIEATR ALLKELR VIE
Sbjct: 1240 FEQTTEWGLDTDGINLQQVMCQHGVDERRTYSNNTTEIMEVLGIEATRKALLKELRNVIE 1299
Query: 719 FDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 898
FDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE
Sbjct: 1300 FDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 1359
Query: 899 VDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMT 1078
+DDCRGVAENIMLGQ+APLGTG+FDV LD +L++ ++ G +G T
Sbjct: 1360 LDDCRGVAENIMLGQMAPLGTGEFDVILDEEMLKSVPENQRHHLM--PNGVPGDVAGFAT 1417
Query: 1079 PALGGMTP---------------FTSARTPSHFAMTPM-----YGAKTPLSSY--DXXXX 1192
P G MTP F++ TPS +PM GA S + D
Sbjct: 1418 PGPGFMTPSMATPYDTRSPDWVDFSAPSTPSEPMFSPMGNSGAVGATIGASPWRSDLSPY 1477
Query: 1193 XXXXXXXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSP--APTAFA 1366
+ G S S YS + Y+ SPSY P+SP YSPSSP +P++ +
Sbjct: 1478 ASSPGYSPSSPFAASPGYSPS-SPSYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPS 1536
Query: 1367 HSPGGSSF 1390
+SP S+
Sbjct: 1537 YSPSSPSY 1544
>gb|KDE09572.1| hypothetical protein MVLG_00467 [Microbotryum lychnidis-dioicae p1A1
Lamole]
Length = 1097
Score = 417 bits (1071), Expect = e-127
Identities = 237/470 (50%), Positives = 301/470 (64%), Gaps = 11/470 (2%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDSISGY 181
+DID AKE+Q + YTTLKT+T TEI Y+P++ TT I D EFVE ++A+ D+D +
Sbjct: 453 RDIDLAKEVQTMLSYTTLKTITASTEIIYDPEVNTTVITDDIEFVEAFFAIPDEDVEANL 512
Query: 182 --QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISE 355
QSPW+LRFEL+ MLDKKL M V KI E F +D+ IW++DNA+ VIRCR ++E
Sbjct: 513 HRQSPWLLRFELDRAKMLDKKLEMSFVAGKIAEVFEQDLFVIWSEDNAEKLVIRCRALNE 572
Query: 356 PGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSG 535
G K+ EE EED+FLK++E +MLS I LRG++GI RV+++ + I +SG
Sbjct: 573 EGRDKEDGAEE-AEDAEEDIFLKQLEASMLSTISLRGVEGIERVFMLQHKRNVI--TESG 629
Query: 536 LIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVI 715
EW LETDG NL++VL D VD TRT SN+CVE++QVLGIEA RA++L+ELR VI
Sbjct: 630 EFDNPTEWVLETDGINLRKVLCVDGVDPTRTVSNSCVEVLQVLGIEAARASVLRELRNVI 689
Query: 716 EFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVG 895
EFDGS VNYRHL++L D+MT+RG LMAITRHGINR++TGALMRCSFEETVEIL EAAA G
Sbjct: 690 EFDGSRVNYRHLSMLTDIMTNRGSLMAITRHGINRSDTGALMRCSFEETVEILFEAAATG 749
Query: 896 EVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNM 1075
E+D C GVAENI+LGQVAP+GTG F++ LD +L+ D + A Y G +
Sbjct: 750 EIDYCTGVAENILLGQVAPMGTGAFELSLDMEMLKEVVI--DHRLPMAGMN-AYGNDGGL 806
Query: 1076 TPALGGMTPFTSA---RTPSHFAM------TPMYGAKTPLSSYDXXXXXXXXXXXXXXXV 1228
TP GGMTP+ A RTP H M +P+Y + + YD
Sbjct: 807 TPGGGGMTPYADANDSRTPMHVPMDGLANFSPLYDSS---AGYD---------------- 847
Query: 1229 LEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPG 1378
+ GG + GG + Y SP G SP YSPSSP P SPG
Sbjct: 848 -QGGGLTPIYGG----ASPAYGGASPFGGGASPGYSPSSPFPGYSPVSPG 892
>emb|CDH50425.1| beta and beta-prime subunits of dna dependentrna-polymerase
[Lichtheimia corymbifera JMRC:FSU:9682]
Length = 1774
Score = 427 bits (1098), Expect = e-127
Identities = 247/484 (51%), Positives = 316/484 (65%), Gaps = 21/484 (4%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDS-ISG 178
++I+ AKE+Q +E+TTL+ VT RTEI+Y+PD T IE D +FV+ YY +ED +S +
Sbjct: 1142 RNIELAKEVQVHLEHTTLQKVTARTEIFYDPDPRNTIIEEDADFVDTYYQLEDDNSPVVT 1201
Query: 179 YQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEP 358
SPW+LR EL+ +M+DK+L++ V +I E F D+H I +DDN++ +IRCR++ +
Sbjct: 1202 RVSPWLLRIELDRGMMVDKRLNITEVVQRISEEFKSDLHVIGSDDNSEKLIIRCRVMMDE 1261
Query: 359 GSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGL 538
K +DE+ G + EED FL+++E +MLS+I LRGI I +VY+++ T L+ +G
Sbjct: 1262 NEEKG-MDEDEG-RAEEDTFLRKLETSMLSSINLRGIPRIQKVYIVERKDTR--LNANGN 1317
Query: 539 IQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIE 718
EW L+TDG NLQ+V+ VD RTYSNN VEIM+VLGIEATR ALLKELR VIE
Sbjct: 1318 FDTVTEWGLDTDGINLQQVMCQRGVDERRTYSNNTVEIMEVLGIEATRKALLKELRNVIE 1377
Query: 719 FDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 898
FDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMRCSFEETVEIL+EAAAVGE
Sbjct: 1378 FDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMRCSFEETVEILLEAAAVGE 1437
Query: 899 VDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRT-------TAPAGDSSIVKAKEGYDY 1057
+DDCRGVAENIMLGQ+APLGTG+FDV LD +L+T T P G V G+
Sbjct: 1438 LDDCRGVAENIMLGQLAPLGTGEFDVMLDEDMLKTIPHDNRQTMPNGVPGDV---GGFTT 1494
Query: 1058 RRSGNMTPALG--------GMTPFTSARTPSHFAMTPM--YGAKTPLSSYDXXXXXXXXX 1207
G MTP LG F+ +PS +PM GA +P +
Sbjct: 1495 PGPGYMTPNLGTPYDTRSPDWVDFSHPSSPSEPMFSPMGNTGAASPSGASPWRGDLSPYA 1554
Query: 1208 XXXXXXVLEAGGKSVSVGGIYSYQTSP-YNTGSPSYGPTSPQYSPSSP--APTAFAHSPG 1378
G S SY TSP Y+ SP+Y PTSP YSP+SP +PT+ ++SP
Sbjct: 1555 ASPGYSPTSPGYSPSSP----SYITSPGYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPT 1610
Query: 1379 GSSF 1390
S+
Sbjct: 1611 SPSY 1614
>emb|SAL97750.1| hypothetical protein [Absidia glauca]
Length = 1682
Score = 426 bits (1094), Expect = e-127
Identities = 239/469 (50%), Positives = 303/469 (64%), Gaps = 20/469 (4%)
Frame = +2
Query: 2 KDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDREFVELYYAMEDKDS-ISG 178
++I+ AKE+Q +E+TTL+ VT +EI+Y+PD +T IE D EFV+ YY +ED +S
Sbjct: 1161 RNIELAKEVQVHLEHTTLQKVTSASEIYYDPDPRSTIIEEDTEFVDTYYQLEDDNSPFVT 1220
Query: 179 YQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWNDDNADLKVIRCRIISEP 358
SPW+LR ELN +M+DK+L++ V KI + F D+H I +D+N++ +IRCR++S+
Sbjct: 1221 RVSPWLLRIELNRGMMIDKRLNITEVVQKISDEFKNDLHVIGSDENSEKLIIRCRVMSDE 1280
Query: 359 GSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRVYLIDSNKTHIYLDDSGL 538
KD DE+ K EED FL+++E++MLS+I LRGI I +VY+++ T L+ G
Sbjct: 1281 NEEKDMDDEDT--KTEEDTFLRKLESSMLSSINLRGIPRIQKVYIVERKDT--ILNSQGK 1336
Query: 539 IQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLGIEATRAALLKELRGVIE 718
++ EW L+TDG NLQ+V+ VD RTYSNN VEIM+VLGIEATR ALLKELR VIE
Sbjct: 1337 FEQTTEWGLDTDGINLQQVMCQHGVDERRTYSNNTVEIMEVLGIEATRKALLKELRNVIE 1396
Query: 719 FDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 898
FDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE
Sbjct: 1397 FDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMRCSFEETVEILMEAAAVGE 1456
Query: 899 VDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSSIVKAKEGYDYRRSGNMT 1078
+DDCRGVAENIMLGQ+APLGTG+FDV LD +L+T ++ G +G T
Sbjct: 1457 LDDCRGVAENIMLGQMAPLGTGEFDVILDEEMLKTVPENQRHHLI--PNGVSGDIAGFAT 1514
Query: 1079 PALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXXXXXXXXVLEAGGKSVSV 1258
P G MTP S TP P S + +GG S+
Sbjct: 1515 PGPGFMTP--SMATPYDTRSPDWVDFSAPSSPSEPMFSPMG----------NSGGVGASI 1562
Query: 1259 GG------IYSYQTSP-------------YNTGSPSYGPTSPQYSPSSP 1348
G + Y +SP Y+ SPSY P+SP YSPSSP
Sbjct: 1563 GASPWRSDLSPYASSPGYSPSTPFAASPGYSPSSPSYSPSSPSYSPSSP 1611