BLASTX nr result

ID: Ophiopogon27_contig00038678 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00038678
         (374 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273202.1| protein SCAR4 isoform X2 [Asparagus officina...   103   5e-23
ref|XP_020273201.1| protein SCAR4 isoform X1 [Asparagus officina...   103   5e-23

>ref|XP_020273202.1| protein SCAR4 isoform X2 [Asparagus officinalis]
          Length = 1186

 Score =  103 bits (256), Expect = 5e-23
 Identities = 61/131 (46%), Positives = 81/131 (61%), Gaps = 13/131 (9%)
 Frame = +1

Query: 1    HQESIREETAPSSHLLMDVGEPFEEAPELQSGSMPKIISFEKYLTLKKGSNQSNHV---- 168
            HQES +E+                E   LQSGS+PKIISFE+YL++K   N++N +    
Sbjct: 757  HQESAKEK----------------ETLRLQSGSVPKIISFERYLSMKNNGNETNLLDTAG 800

Query: 169  ---DRMHEPDSDVTANDVSFSEFLKLTQMDWLLN------VDPLQNQKGFDSKAPMQISP 321
               D + EP+S  T N+V+F+EFLKL QMDWLLN      VDPLQ+ K FD +AP+Q++ 
Sbjct: 801  EVSDSVTEPESYDTVNNVTFAEFLKLAQMDWLLNIEKEGSVDPLQSGKRFDRQAPLQMTR 860

Query: 322  SAKEGLSLSPH 354
            +AKE L LS H
Sbjct: 861  NAKEDLFLSSH 871


>ref|XP_020273201.1| protein SCAR4 isoform X1 [Asparagus officinalis]
 gb|ONK62638.1| uncharacterized protein A4U43_C07F6270 [Asparagus officinalis]
          Length = 1187

 Score =  103 bits (256), Expect = 5e-23
 Identities = 61/131 (46%), Positives = 81/131 (61%), Gaps = 13/131 (9%)
 Frame = +1

Query: 1    HQESIREETAPSSHLLMDVGEPFEEAPELQSGSMPKIISFEKYLTLKKGSNQSNHV---- 168
            HQES +E+                E   LQSGS+PKIISFE+YL++K   N++N +    
Sbjct: 758  HQESAKEK----------------ETLRLQSGSVPKIISFERYLSMKNNGNETNLLDTAG 801

Query: 169  ---DRMHEPDSDVTANDVSFSEFLKLTQMDWLLN------VDPLQNQKGFDSKAPMQISP 321
               D + EP+S  T N+V+F+EFLKL QMDWLLN      VDPLQ+ K FD +AP+Q++ 
Sbjct: 802  EVSDSVTEPESYDTVNNVTFAEFLKLAQMDWLLNIEKEGSVDPLQSGKRFDRQAPLQMTR 861

Query: 322  SAKEGLSLSPH 354
            +AKE L LS H
Sbjct: 862  NAKEDLFLSSH 872


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