BLASTX nr result

ID: Ophiopogon27_contig00038572 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00038572
         (450 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK64342.1| uncharacterized protein A4U43_C07F24700 [Asparagu...    55   2e-06
ref|XP_020275692.1| RNA-binding protein 24 [Asparagus officinali...    55   3e-06

>gb|ONK64342.1| uncharacterized protein A4U43_C07F24700 [Asparagus officinalis]
          Length = 195

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +1

Query: 73  FGLHYHPQMLQYPYLSQQFGSAGSSTILSLPAASVA 180
           FGLHY PQMLQYPYL QQFGS  S+ ILSLPA++ A
Sbjct: 141 FGLHY-PQMLQYPYLPQQFGSGSSTPILSLPASNAA 175


>ref|XP_020275692.1| RNA-binding protein 24 [Asparagus officinalis]
 ref|XP_020275693.1| RNA-binding protein 24 [Asparagus officinalis]
          Length = 264

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +1

Query: 73  FGLHYHPQMLQYPYLSQQFGSAGSSTILSLPAASVA 180
           FGLHY PQMLQYPYL QQFGS  S+ ILSLPA++ A
Sbjct: 210 FGLHY-PQMLQYPYLPQQFGSGSSTPILSLPASNAA 244


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