BLASTX nr result

ID: Ophiopogon27_contig00038509 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00038509
         (368 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022146522.1| FACT complex subunit SPT16-like [Momordica c...    54   8e-06

>ref|XP_022146522.1| FACT complex subunit SPT16-like [Momordica charantia]
          Length = 1074

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = +2

Query: 125  FIEDGGWKFLNIEGNDSES*AYEASD*GY*LSNVEPKTDLGED 253
            FI+DGGW+FLN+E  DSES   E SD GY  S+VEP++D  ED
Sbjct: 952  FIDDGGWEFLNLEATDSESDNSEESDKGYVPSDVEPESDSEED 994


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