BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00038479
         (467 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010912296.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06

>ref|XP_010912296.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020
           [Elaeis guineensis]
          Length = 773

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 37/88 (42%), Positives = 42/88 (47%), Gaps = 13/88 (14%)
 Frame = -1

Query: 281 TN*SYWVHKIHTITT---DVDAA----------GXXXXXXXXXXXRHSL*TCRRFVEAHR 141
           TN SYW  +IH + +   D DAA          G            HSL    R  EAHR
Sbjct: 42  TNRSYWTKRIHFLCSAAGDPDAALRLLHRLRLRGFVPDSLNLASIIHSLCDAGRSDEAHR 101

Query: 140 RXXXXXXSQWLPDDRTANSLIARLLDCR 57
           R      + WLPDDRTAN L+ARLLD R
Sbjct: 102 RLLLSTAAGWLPDDRTANVLLARLLDAR 129