BLASTX nr result

ID: Ophiopogon27_contig00038445 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00038445
         (668 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK77795.1| uncharacterized protein A4U43_C02F10740 [Asparagu...    88   2e-16
gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]     80   1e-13
gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officin...    77   1e-12
gb|ONK61138.1| uncharacterized protein A4U43_C08F26630 [Asparagu...    72   4e-12

>gb|ONK77795.1| uncharacterized protein A4U43_C02F10740 [Asparagus officinalis]
          Length = 804

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 46/127 (36%), Positives = 71/127 (55%)
 Frame = +1

Query: 19  QKKTLTQEECCFRNRIYLEVICNMNNAGKQLALSSEESDVERTPSVKELLNKFDGVCQNT 198
           +KKTL  +        YL V  NM   G+   LSS+ S+ + +PSV+E+ N+F+G+ Q T
Sbjct: 428 RKKTLEDK--------YLRVTSNMVGRGRSSTLSSDGSETDHSPSVREITNEFEGIYQRT 479

Query: 199 RTKTGTIPPVDYRKLAKGLNSDEDHXXXXXXXXXXXXXXXXXHAYMVSIPDVVTKRLDEQ 378
           RT+TG IPP++Y+ LA+G NSD++H                   +M    + ++KRLDEQ
Sbjct: 480 RTRTGAIPPINYQSLARGTNSDDEHSAIAESQSSSSFVGHESFVHMAEHSEDLSKRLDEQ 539

Query: 379 HSWNDSE 399
            +   S+
Sbjct: 540 EAMLKSQ 546


>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 41/121 (33%), Positives = 69/121 (57%)
 Frame = +1

Query: 19  QKKTLTQEECCFRNRIYLEVICNMNNAGKQLALSSEESDVERTPSVKELLNKFDGVCQNT 198
           QKK +++ E       Y +V  NM + GK    SS+ES+   +P+V+E+ ++F+GV ++T
Sbjct: 329 QKKKVSEVE-------YPQVTINMTSRGKAPCPSSDESERSHSPTVREICDEFEGVYRHT 381

Query: 199 RTKTGTIPPVDYRKLAKGLNSDEDHXXXXXXXXXXXXXXXXXHAYMVSIPDVVTKRLDEQ 378
           R++TG I PV+Y+KLA+G+ + ++H                   YM   P+ + KR+DE 
Sbjct: 382 RSRTGAIRPVNYQKLAQGITTSDEHSAIAESQSSSSIGAQKVSVYMTGNPEDIAKRVDEH 441

Query: 379 H 381
           H
Sbjct: 442 H 442


>gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officinalis]
          Length = 869

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/127 (34%), Positives = 64/127 (50%)
 Frame = +1

Query: 1   RRDELVQKKTLTQEECCFRNRIYLEVICNMNNAGKQLALSSEESDVERTPSVKELLNKFD 180
           +R    +KKT   E        Y +V  NM   GK     S+ES     P+V+E+ ++F+
Sbjct: 382 KRQRRCRKKTAEAE--------YPQVTINMIGQGKASHTDSDESQESHPPTVREICDQFE 433

Query: 181 GVCQNTRTKTGTIPPVDYRKLAKGLNSDEDHXXXXXXXXXXXXXXXXXHAYMVSIPDVVT 360
           GV QNTRT+TG I PV+Y+KLAK + + ++H                  AY     + +T
Sbjct: 434 GVYQNTRTRTGAIRPVNYQKLAKRITTSDEHSAIAESQSSSSVGAREVSAYTTGNHEDIT 493

Query: 361 KRLDEQH 381
           KR+DE H
Sbjct: 494 KRVDEHH 500


>gb|ONK61138.1| uncharacterized protein A4U43_C08F26630 [Asparagus officinalis]
          Length = 181

 Score = 72.4 bits (176), Expect = 4e-12
 Identities = 39/91 (42%), Positives = 58/91 (63%)
 Frame = +1

Query: 1   RRDELVQKKTLTQEECCFRNRIYLEVICNMNNAGKQLALSSEESDVERTPSVKELLNKFD 180
           +R    +KKT+  E        Y EV  N+   GK L  SSEES    +P+V+E+ ++F+
Sbjct: 93  KRQRRYKKKTVETE--------YPEVTINVIGRGKALGPSSEESQRSYSPTVREICDEFE 144

Query: 181 GVCQNTRTKTGTIPPVDYRKLAKGLNSDEDH 273
           GV  +TRT+TGTI  V+Y++LAKG+ SD++H
Sbjct: 145 GVYHHTRTRTGTIRSVNYQRLAKGIISDDEH 175


Top