BLASTX nr result

ID: Ophiopogon27_contig00038318 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00038318
         (371 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020262089.1| 5' exonuclease Apollo [Asparagus officinalis...    55   3e-06

>ref|XP_020262089.1| 5' exonuclease Apollo [Asparagus officinalis]
 gb|ONK73267.1| uncharacterized protein A4U43_C04F29160 [Asparagus officinalis]
          Length = 610

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = -2

Query: 370 VPVPRPLPSLVELMNGPKRAKLASESTSGRLNYCYNSA 257
           VPVPRPLPSLV+L++  KR KL SE  S RL YCY+S+
Sbjct: 564 VPVPRPLPSLVDLLSSSKRVKLRSEPISDRLEYCYSSS 601


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