BLASTX nr result

ID: Ophiopogon27_contig00037917 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00037917
         (419 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS74396.1| hypothetical protein M569_00359, partial [Genlise...    59   1e-08

>gb|EPS74396.1| hypothetical protein M569_00359, partial [Genlisea aurea]
          Length = 106

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 37/71 (52%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
 Frame = +2

Query: 224 IGFAPMETINFIHKKYRYMIDPHF*IVKMAFSTL---SILLVIGTGK---MVSFVRTHDL 385
           IGFAPM+TI FIH    Y++   F IV    S+    S+  +I +GK   +V FV  HDL
Sbjct: 1   IGFAPMKTIRFIHIS-SYLVLVFFLIVNGVRSSCLCYSLRHIIPSGKPGLLVFFVSAHDL 59

Query: 386 NESHIHPSTCS 418
           NESHIHPSTCS
Sbjct: 60  NESHIHPSTCS 70


Top