BLASTX nr result

ID: Ophiopogon27_contig00037821 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00037821
         (446 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OUC59779.1| hypothetical protein MWQ_09360 [Acinetobacter sei...    53   2e-06

>gb|OUC59779.1| hypothetical protein MWQ_09360 [Acinetobacter seifertii]
          Length = 72

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 31/75 (41%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
 Frame = -3

Query: 420 LWNGWNLRQWW*LDIRNNWNLREWYLHILSHNLFRNLCLGHNWLIWQGWQL-NLWKGWHL 244
           LWN WNL   W     N WNL  W       NL+    L + W +W  W L NLW  W+L
Sbjct: 3   LWNLWNLWNLW-----NLWNL--W-------NLWNLWNLWNLWNLWNLWNLWNLWNLWNL 48

Query: 243 W*RWK-FRLWQGWNL 202
           W  W  + LW  WNL
Sbjct: 49  WNLWNLWNLWNLWNL 63


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