BLASTX nr result

ID: Ophiopogon27_contig00037751 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00037751
         (512 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KJB24403.1| hypothetical protein B456_004G143800 [Gossypium r...    54   6e-06
gb|PPD78667.1| hypothetical protein GOBAR_DD24398 [Gossypium bar...    54   9e-06

>gb|KJB24403.1| hypothetical protein B456_004G143800 [Gossypium raimondii]
          Length = 153

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 22/24 (91%), Positives = 24/24 (100%)
 Frame = +2

Query: 2   AHLLCFATSWGTALWVTFIGGIIM 73
           AHLLCFAT+WGTALWVTFIGGI+M
Sbjct: 44  AHLLCFATAWGTALWVTFIGGILM 67


>gb|PPD78667.1| hypothetical protein GOBAR_DD24398 [Gossypium barbadense]
          Length = 175

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 22/24 (91%), Positives = 24/24 (100%)
 Frame = +2

Query: 2   AHLLCFATSWGTALWVTFIGGIIM 73
           AHLLCFAT+WGTALWVTFIGGI+M
Sbjct: 44  AHLLCFATAWGTALWVTFIGGILM 67


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