BLASTX nr result

ID: Ophiopogon27_contig00037432 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00037432
         (477 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013746247.1| uncharacterized protein LOC106448985 [Brassi...    57   2e-06
ref|XP_013601729.1| PREDICTED: uncharacterized protein LOC106309...    57   2e-06
ref|XP_013689133.1| uncharacterized protein LOC106392907 [Brassi...    57   2e-06
ref|XP_013658064.1| uncharacterized protein LOC106362763 [Brassi...    55   7e-06

>ref|XP_013746247.1| uncharacterized protein LOC106448985 [Brassica napus]
          Length = 1526

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +3

Query: 15   LLTDKNSLWSKWMRVKFLKHVNFWDTIEDNNISSIWKEILMPRTIAMKCMRYDLIIGNIS 194
            L    +SLW KW+R   L+   FWD  +    S +W+++L  R++A + +RY++  GN +
Sbjct: 1195 LFAQSSSLWVKWVRRFLLREYTFWDVKDTGLGSWVWRKLLRIRSMAKRFLRYEVNDGNTA 1254

Query: 195  -F*KDPWHKDERLIQLIG 245
             F  D WH   RLI++ G
Sbjct: 1255 RFWTDIWHPRGRLIEVAG 1272


>ref|XP_013601729.1| PREDICTED: uncharacterized protein LOC106309219 [Brassica oleracea
           var. oleracea]
          Length = 300

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = +3

Query: 15  LLTDKNSLWSKWMRVKFLKHVNFWDTIEDNNISSIWKEILMPRTIAMKCMRYDLIIGN-I 191
           L T+  S+W+ W++   L+  +FWD IE ++ S +WK++L   ++A + +R ++  G  +
Sbjct: 5   LFTEAGSIWTTWVKQYLLREESFWDVIEGHSGSWVWKKLLQLHSLAKRFIRMEVHNGKLV 64

Query: 192 SF*KDPWHKDERLIQLIG 245
               D WH   RLI+++G
Sbjct: 65  RSWSDVWHPIGRLIEVVG 82


>ref|XP_013689133.1| uncharacterized protein LOC106392907 [Brassica napus]
          Length = 340

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = +3

Query: 15  LLTDKNSLWSKWMRVKFLKHVNFWDTIEDNNISSIWKEILMPRTIAMKCMRYDLIIG-NI 191
           L +  +SLW+ W++ K LKH  FWD  +    S  W+++L  R +A + +R +   G ++
Sbjct: 160 LFSQSSSLWAVWVKQKLLKHETFWDAKDTVICSWAWRKLLRYRPLAKQFIRMNFQAGLDV 219

Query: 192 SF*KDPWHKDERLIQLIG 245
            F  D WH   RLI ++G
Sbjct: 220 RFWTDVWHPCGRLIDIVG 237


>ref|XP_013658064.1| uncharacterized protein LOC106362763 [Brassica napus]
          Length = 1670

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = +3

Query: 15   LLTDKNSLWSKWMRVKFLKHVNFWDTIEDNNISSIWKEILMPRTIAMKCMRYDLIIG-NI 191
            L T   SLW  W++   LK+ +FWD  +D   S IW+++L  R +A + +R+D+  G N 
Sbjct: 1341 LFTQPTSLWVSWVKHYLLKYNSFWDVRDDTKGSWIWRKLLKLRDVAYEFLRFDIQDGNNC 1400

Query: 192  SF*KDPWHKDERLIQLIG 245
             F  D W    +LI + G
Sbjct: 1401 HFWFDDWLGQGKLIDITG 1418


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