BLASTX nr result

ID: Ophiopogon27_contig00037385 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00037385
         (483 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KPI88275.1| putative poly-zinc finger protein 2 [Leptomonas s...    54   5e-06

>gb|KPI88275.1| putative poly-zinc finger protein 2 [Leptomonas seymouri]
          Length = 135

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
 Frame = +3

Query: 123 GMTSMSRKTIRPSLKAICYLCGFRGHLRALCPNVV------CFACHKFGHRALNCPWIPL 284
           G+   SR+   P+  A C+ CG  GH+   CP+ V      CF CHK GHRA +CP  P 
Sbjct: 8   GVGHQSRECTAPADSAPCFRCGKPGHIAKECPSTVSAEEAPCFYCHKPGHRARDCPEAPP 67

Query: 285 RRQAV 299
           + + V
Sbjct: 68  KSETV 72


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