BLASTX nr result

ID: Ophiopogon27_contig00036682 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00036682
         (455 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256808.1| zinc finger CCCH domain-containing protein 7...    55   4e-11
ref|XP_010924983.1| PREDICTED: zinc finger CCCH domain-containin...    61   2e-10
ref|XP_017701799.1| PREDICTED: zinc finger CCCH domain-containin...    56   5e-09
ref|XP_008807156.1| PREDICTED: zinc finger CCCH domain-containin...    56   6e-09
ref|XP_009412230.1| PREDICTED: zinc finger CCCH domain-containin...    55   8e-08

>ref|XP_020256808.1| zinc finger CCCH domain-containing protein 7 [Asparagus
           officinalis]
 gb|ONK74985.1| uncharacterized protein A4U43_C03F12120 [Asparagus officinalis]
          Length = 632

 Score = 55.5 bits (132), Expect(2) = 4e-11
 Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 22/103 (21%)
 Frame = -3

Query: 453 AGNLVNTPKQPMQIPAGSLVKFPKQPMQI------------PNGIRFVSFGKGPSANADN 310
           AGNLV+  K P  I    ++K P     +            P GIRFVSFGKGPS +  N
Sbjct: 502 AGNLVDNAKLPTPISPQLIMKKPLTENSVNNLKLSTTISPPPPGIRFVSFGKGPSESGGN 561

Query: 309 KLLGNQQKHEK----------LAAGHRSGPSVAQKSLLASRSS 211
           K  GN Q+H+K          L++ H+S P+ AQ    A+ ++
Sbjct: 562 KPKGNWQQHKKEKLLAAAHNILSSQHKSFPAAAQSGTEANTNA 604



 Score = 39.7 bits (91), Expect(2) = 4e-11
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = -1

Query: 173 SNDRSLQTGMSEASKLLEEFLFC 105
           S+D SLQT +SEASKLLEEFLFC
Sbjct: 609 SDDGSLQTEVSEASKLLEEFLFC 631


>ref|XP_010924983.1| PREDICTED: zinc finger CCCH domain-containing protein 7 [Elaeis
           guineensis]
 ref|XP_010924985.1| PREDICTED: zinc finger CCCH domain-containing protein 7 [Elaeis
           guineensis]
 ref|XP_010924986.1| PREDICTED: zinc finger CCCH domain-containing protein 7 [Elaeis
           guineensis]
 ref|XP_010924988.1| PREDICTED: zinc finger CCCH domain-containing protein 7 [Elaeis
           guineensis]
 ref|XP_019707007.1| PREDICTED: zinc finger CCCH domain-containing protein 7 [Elaeis
           guineensis]
          Length = 866

 Score = 61.2 bits (147), Expect(2) = 2e-10
 Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 12/87 (13%)
 Frame = -3

Query: 405 GSLVKFPKQPMQIPNGIRFVSFGKGP----SANADN-----KLLGNQQKHEKLAAGHRSG 253
           G  +K PK PM+IPNGIRF+SFGKGP    S + DN     K+L  Q + + L  GH++ 
Sbjct: 731 GDTIKPPKIPMRIPNGIRFLSFGKGPSDSISKHQDNLLKECKILDQQNQEKFLMDGHKND 790

Query: 252 P---SVAQKSLLASRSSNMPVHNAAAN 181
               S AQKSLL + S +  +   AAN
Sbjct: 791 ANDRSSAQKSLLKAHSESKMMSGRAAN 817



 Score = 32.0 bits (71), Expect(2) = 2e-10
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = -1

Query: 164 RSLQTGMSEASKLLEEFLFCGSS 96
           RSL + +S+ASK+LEEFLF G S
Sbjct: 844 RSLHSEVSDASKILEEFLFSGIS 866


>ref|XP_017701799.1| PREDICTED: zinc finger CCCH domain-containing protein 7 isoform X1
           [Phoenix dactylifera]
          Length = 859

 Score = 56.2 bits (134), Expect(2) = 5e-09
 Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
 Frame = -3

Query: 405 GSLVKFPKQPMQIPNGIRFVSFGKGPSAN-----------ADNKLLGNQQKHEKLAAGHR 259
           G  +K PK PM+IPNGIRF+SFGKGPS +            + K+L  Q + + L  GH+
Sbjct: 722 GDTIKPPKIPMRIPNGIRFLSFGKGPSDSINRQHHDNLLLKERKILDQQNQEKFLMDGHK 781

Query: 258 SGP---SVAQKSLLASRSSNMPVHNAAAN 181
           +     S+AQ SLL   S +  +   AA+
Sbjct: 782 NDTDDISLAQTSLLKVHSESNVMSGGAAH 810



 Score = 32.0 bits (71), Expect(2) = 5e-09
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = -1

Query: 164 RSLQTGMSEASKLLEEFLFCGSS 96
           RSL + +S+ASK+LEEFLF G S
Sbjct: 837 RSLHSEVSDASKILEEFLFSGVS 859


>ref|XP_008807156.1| PREDICTED: zinc finger CCCH domain-containing protein 7 isoform X2
           [Phoenix dactylifera]
          Length = 859

 Score = 55.8 bits (133), Expect(2) = 6e-09
 Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
 Frame = -3

Query: 405 GSLVKFPKQPMQIPNGIRFVSFGKGPSAN-----------ADNKLLGNQQKHEKLAAGHR 259
           G  +K PK PM+IPNGIRF+SFGKGPS +            + K+L  Q + + L  GH+
Sbjct: 722 GDTIKPPKIPMRIPNGIRFLSFGKGPSDSINRQHHDNLLLKERKILDQQNQEKFLMDGHK 781

Query: 258 SGP---SVAQKSLLASRSSNMPVHNAAA 184
           +     S+AQ SLL   S +  +   AA
Sbjct: 782 NDTDDISLAQTSLLKVHSESNVMSGGAA 809



 Score = 32.0 bits (71), Expect(2) = 6e-09
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = -1

Query: 164 RSLQTGMSEASKLLEEFLFCGSS 96
           RSL + +S+ASK+LEEFLF G S
Sbjct: 837 RSLHSEVSDASKILEEFLFSGVS 859


>ref|XP_009412230.1| PREDICTED: zinc finger CCCH domain-containing protein 65 [Musa
           acuminata subsp. malaccensis]
          Length = 816

 Score = 54.7 bits (130), Expect(2) = 8e-08
 Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 12/84 (14%)
 Frame = -3

Query: 405 GSLVKFPKQPMQIPNGIRFVSFGKGPSANAD---NKLLG-----NQQKHEK-LAAGHRSG 253
           G+LVK  K+PMQIPNGIRF+SFG G   +     N LL      +QQK EK LA GH++ 
Sbjct: 693 GNLVKIAKEPMQIPNGIRFISFGNGLLESGKLPANSLLPEKHGCSQQKPEKPLADGHKNA 752

Query: 252 PSVAQKSLLASR---SSNMPVHNA 190
              ++KSL   +   S ++P  NA
Sbjct: 753 VCRSEKSLSKPQMEYSVSLPATNA 776



 Score = 29.3 bits (64), Expect(2) = 8e-08
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = -1

Query: 164 RSLQTGMSEASKLLEEFLF 108
           RSLQ+  S+ASK+L+EFLF
Sbjct: 794 RSLQSEASDASKILDEFLF 812


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