BLASTX nr result

ID: Ophiopogon27_contig00036611 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00036611
         (533 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020240793.1| probable E3 ubiquitin-protein ligase MARCH10...   118   6e-28
ref|XP_020240787.1| probable E3 ubiquitin-protein ligase MARCH10...   118   6e-28

>ref|XP_020240793.1| probable E3 ubiquitin-protein ligase MARCH10 isoform X2 [Asparagus
           officinalis]
 gb|ONK79633.1| uncharacterized protein A4U43_C01F8360 [Asparagus officinalis]
          Length = 476

 Score =  118 bits (295), Expect = 6e-28
 Identities = 56/87 (64%), Positives = 70/87 (80%)
 Frame = +3

Query: 222 MTTQDYTSHEHEANEDHRTSMLNQEDHEMTAEIVEEVPPIHHGKRPRLSVEIPSKDLRDP 401
           MT+Q Y   EHEANEDH  S+LNQ+DHE +AEI+EEV P+H+ KRPRLSVEIPSKD   P
Sbjct: 1   MTSQSYIPIEHEANEDHGISVLNQKDHEKSAEIIEEVSPVHNLKRPRLSVEIPSKDSGSP 60

Query: 402 SVRITIPRSPSSASTEVNLCKTSTPSA 482
           S+ I +P +PSS ST V+LC+TSTP++
Sbjct: 61  SMTINMPTTPSSDSTNVDLCRTSTPTS 87


>ref|XP_020240787.1| probable E3 ubiquitin-protein ligase MARCH10 isoform X1 [Asparagus
           officinalis]
          Length = 477

 Score =  118 bits (295), Expect = 6e-28
 Identities = 56/87 (64%), Positives = 70/87 (80%)
 Frame = +3

Query: 222 MTTQDYTSHEHEANEDHRTSMLNQEDHEMTAEIVEEVPPIHHGKRPRLSVEIPSKDLRDP 401
           MT+Q Y   EHEANEDH  S+LNQ+DHE +AEI+EEV P+H+ KRPRLSVEIPSKD   P
Sbjct: 1   MTSQSYIPIEHEANEDHGISVLNQKDHEKSAEIIEEVSPVHNLKRPRLSVEIPSKDSGSP 60

Query: 402 SVRITIPRSPSSASTEVNLCKTSTPSA 482
           S+ I +P +PSS ST V+LC+TSTP++
Sbjct: 61  SMTINMPTTPSSDSTNVDLCRTSTPTS 87


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