BLASTX nr result

ID: Ophiopogon27_contig00036553 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00036553
         (470 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020243014.1| zinc finger CCHC domain-containing protein 9...    58   5e-08
gb|KND56555.1| hypothetical protein BVER_03567 [Candidatus Burkh...    57   2e-06
ref|XP_020243711.1| uncharacterized protein LOC109821969 [Aspara...    57   2e-06

>ref|XP_020243014.1| zinc finger CCHC domain-containing protein 9-like [Asparagus
           officinalis]
          Length = 101

 Score = 57.8 bits (138), Expect = 5e-08
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
 Frame = +1

Query: 124 KASVQSNVRATQQSQQR---IASFPRQTASRPT---VAVVCSFCRQPGHVRRECRRRSGS 285
           K  V  N    QQ  Q     A   +  ASRPT     ++C FC +PGH+ ++CRR +G 
Sbjct: 10  KRPVGQNSGGNQQKPQMGGAPAKRQQTGASRPTPQPTNMICHFCSKPGHLMKDCRRANGL 69

Query: 286 CLACGSMEHQVYQC 327
           CLACG  +HQ+  C
Sbjct: 70  CLACGVADHQITTC 83


>gb|KND56555.1| hypothetical protein BVER_03567 [Candidatus Burkholderia
           verschuerenii]
          Length = 350

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 21/48 (43%), Positives = 31/48 (64%)
 Frame = +1

Query: 205 RPTVAVVCSFCRQPGHVRRECRRRSGSCLACGSMEHQVYQCLVGRLQQ 348
           +P  +VVC +C +PGHV  +C R+S  CL CGS +H++ +C    L Q
Sbjct: 34  KPAASVVCRYCNKPGHVEADCWRKSNKCLRCGSADHRILKCPFVTLDQ 81


>ref|XP_020243711.1| uncharacterized protein LOC109821969 [Asparagus officinalis]
          Length = 352

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/76 (35%), Positives = 45/76 (59%)
 Frame = +1

Query: 100 RHPSGQVWKASVQSNVRATQQSQQRIASFPRQTASRPTVAVVCSFCRQPGHVRRECRRRS 279
           + P GQ    + Q        ++++    PR  A +PT  ++C FC +PGH+ ++CRR +
Sbjct: 254 KRPVGQNSGGNQQKPQTGGAPAKRQQIGTPRP-APQPT-NMICHFCSKPGHLMKDCRRAN 311

Query: 280 GSCLACGSMEHQVYQC 327
           G CLACG+++HQ+  C
Sbjct: 312 GLCLACGAVDHQLSTC 327


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