BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00036330
         (410 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA56982.1| Retrovirus-related Pol polyprotein from transposo...   140   4e-40
gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo...   146   7e-40
dbj|GAV69956.1| gag_pre-integrs domain-containing protein [Cepha...   129   2e-35
dbj|GAV91597.1| gag_pre-integrs domain-containing protein [Cepha...   128   7e-35
dbj|GAV81274.1| gag_pre-integrs domain-containing protein [Cepha...   125   3e-34
dbj|GAV82842.1| gag_pre-integrs domain-containing protein [Cepha...   125   4e-34
dbj|GAV83405.1| gag_pre-integrs domain-containing protein [Cepha...   125   5e-34
dbj|GAV69795.1| gag_pre-integrs domain-containing protein [Cepha...   122   6e-33
ref|XP_020250324.1| uncharacterized protein LOC109827718 [Aspara...   122   2e-32
ref|XP_016457574.1| PREDICTED: uncharacterized mitochondrial pro...   121   7e-32
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]          127   2e-31
ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116...   119   5e-31
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo...   125   9e-31
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...   124   4e-30
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   124   4e-30
gb|KYP46867.1| Retrovirus-related Pol polyprotein from transposo...   112   5e-28
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   117   6e-28
gb|AAC12735.1| putative retrovirus-related polyprotein, partial ...   110   3e-27
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   115   5e-27
dbj|GAV72214.1| gag_pre-integrs domain-containing protein/UBN2_2...   110   7e-27

>gb|PKA56982.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 143

 Score =  140 bits (353), Expect = 4e-40
 Identities = 64/137 (46%), Positives = 93/137 (67%), Gaps = 3/137 (2%)
 Frame = -2

Query: 403 KTISGVWHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGS 224
           +T++ V HVPDL+K ++SLG L+A GCTF+G D  + + +G  I++K E+  +LY+L+G 
Sbjct: 7   RTLTEVRHVPDLRKGLISLGTLDASGCTFTGSDGIIKVKKGTLIVMKGEKIGSLYRLIGK 66

Query: 223 VIIGDVSAVA---EDDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMGKQ 53
            I GDV+  +   +DDT LWH  LGHM E+GL  LH + +L GI+ C +DFC  CV+GKQ
Sbjct: 67  TITGDVAVTSSSDDDDTILWHARLGHMSERGLLELHNRKLLKGIKSCTIDFCESCVLGKQ 126

Query: 52  RRVPFFTLQHKSEGALD 2
            RV F T   +S+  L+
Sbjct: 127 CRVKFVTSNKRSKNILE 143


>gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 365

 Score =  146 bits (368), Expect = 7e-40
 Identities = 66/137 (48%), Positives = 94/137 (68%), Gaps = 3/137 (2%)
 Frame = -2

Query: 403 KTISGVWHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGS 224
           +T++ V HVPDL+K ++SLG L+A GCTF G D  + + +G  +++K E+  +LY+L+G 
Sbjct: 223 RTLTEVRHVPDLRKGLISLGTLDASGCTFIGSDGIIKVKKGAPVVMKGEKIESLYRLIGK 282

Query: 223 VIIGDV---SAVAEDDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMGKQ 53
            I GD+   S+  +DDT LWH  LGHM E+GL  LH + +L GI+ CK+DFC FCV+GKQ
Sbjct: 283 TITGDIAVTSSTDDDDTMLWHARLGHMSERGLLELHNRKLLKGIKSCKIDFCEFCVLGKQ 342

Query: 52  RRVPFFTLQHKSEGALD 2
            RV F T   KS+  L+
Sbjct: 343 CRVKFVTSNKKSKNILE 359


>dbj|GAV69956.1| gag_pre-integrs domain-containing protein [Cephalotus follicularis]
          Length = 176

 Score =  129 bits (324), Expect = 2e-35
 Identities = 59/131 (45%), Positives = 86/131 (65%), Gaps = 6/131 (4%)
 Frame = -2

Query: 385 WHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGSVIIGDV 206
           WHVP LKKN++SLG L++ GC F+GE+  + + RG  +++K ++   LY+L G+ ++G  
Sbjct: 12  WHVPGLKKNLISLGVLDSHGCKFTGENGIIKVLRGALVIMKGKKIDGLYQLQGNAVLGTA 71

Query: 205 SAVAE------DDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMGKQRRV 44
           +  +       D T  WH+ LGHM E+GLQ+L  K +L+G++  KLDFC  CV GKQ RV
Sbjct: 72  TVASSSRDKDADTTRFWHIRLGHMSERGLQILSKKGLLAGVKSGKLDFCEHCVYGKQCRV 131

Query: 43  PFFTLQHKSEG 11
            F T  HKS+G
Sbjct: 132 KFSTAIHKSKG 142


>dbj|GAV91597.1| gag_pre-integrs domain-containing protein [Cephalotus follicularis]
          Length = 177

 Score =  128 bits (321), Expect = 7e-35
 Identities = 61/134 (45%), Positives = 87/134 (64%), Gaps = 6/134 (4%)
 Frame = -2

Query: 385 WHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGSVIIGDV 206
           WHVP LKKN++SLG L++ GC  +GE+  + + RG  +++K E+   LY+L G+ I+G  
Sbjct: 12  WHVPGLKKNLISLGVLDSHGCKCTGENGIIKVLRGALVIMKGEKIDGLYQLYGNTILGTA 71

Query: 205 SAVAE------DDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMGKQRRV 44
           +  +       D T LWHM LGHM E+GLQ+L    +L+G++  KLDF   CV GKQ RV
Sbjct: 72  AVASSSGDKDADTTRLWHMRLGHMSERGLQILSKMGLLAGVKSGKLDFYEHCVYGKQCRV 131

Query: 43  PFFTLQHKSEGALD 2
            F T+ HK++G LD
Sbjct: 132 KFSTVIHKTKGILD 145


>dbj|GAV81274.1| gag_pre-integrs domain-containing protein [Cephalotus follicularis]
          Length = 156

 Score =  125 bits (315), Expect = 3e-34
 Identities = 62/135 (45%), Positives = 90/135 (66%), Gaps = 7/135 (5%)
 Frame = -2

Query: 385 WHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGSVIIGDV 206
           WHV  LKKN++SLG L++ GC F+GE++ + + RG  +++K ++   LY+L G+ ++G +
Sbjct: 12  WHVLGLKKNLISLGVLDSHGCKFTGENEIIKVLRGALVIMKGKKIDGLYQLQGNTVLG-I 70

Query: 205 SAVAE-------DDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMGKQRR 47
           +AVA        D T LWHM  GHM E+ LQ+L  K +L+G++  KLDFC  CV GKQ R
Sbjct: 71  AAVASSSGDKDADTTRLWHMCQGHMSERVLQILSKKGLLAGVKSGKLDFCEHCVYGKQCR 130

Query: 46  VPFFTLQHKSEGALD 2
           V F T  HK++G LD
Sbjct: 131 VKFSTAIHKTKGILD 145


>dbj|GAV82842.1| gag_pre-integrs domain-containing protein [Cephalotus follicularis]
          Length = 165

 Score =  125 bits (315), Expect = 4e-34
 Identities = 60/134 (44%), Positives = 85/134 (63%), Gaps = 6/134 (4%)
 Frame = -2

Query: 385 WHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGSVIIGDV 206
           WHV  LKKN++ LG L++ GC FSGE+  + + RG  +++K ++   LY+L G+ ++G  
Sbjct: 12  WHVQGLKKNLIPLGVLDSHGCKFSGENGIIKVLRGAPVIMKGKKIDGLYELQGNTVLGTA 71

Query: 205 SAVAE------DDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMGKQRRV 44
           +  +       D T LWHM LGHM E  LQ+L  K +L+G++  KLDFC  CV GKQ RV
Sbjct: 72  AVASSSGDKDADTTRLWHMRLGHMSEIWLQILSKKGLLTGVKSGKLDFCEHCVYGKQCRV 131

Query: 43  PFFTLQHKSEGALD 2
            F T  HK++G LD
Sbjct: 132 KFSTTIHKTKGILD 145


>dbj|GAV83405.1| gag_pre-integrs domain-containing protein [Cephalotus follicularis]
          Length = 151

 Score =  125 bits (313), Expect = 5e-34
 Identities = 57/134 (42%), Positives = 85/134 (63%), Gaps = 6/134 (4%)
 Frame = -2

Query: 385 WHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGSVIIGDV 206
           WHV  LKKN++SLG L++ GC F+GE+  + + +G  +++K ++   LY+L G+ ++G  
Sbjct: 12  WHVLGLKKNLISLGVLDSHGCKFTGENGIIKVLKGALVIMKGKKIDGLYQLQGNTVLGTA 71

Query: 205 SAVAE------DDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMGKQRRV 44
           +  +       D T LWHMHLGHM E+GLQ++  K +L+G++  KL FC  CV  K  RV
Sbjct: 72  TVASSSGDKDADTTRLWHMHLGHMSERGLQIMSKKGLLAGVKSGKLHFCEHCVYVKHSRV 131

Query: 43  PFFTLQHKSEGALD 2
            F T  HK+ G LD
Sbjct: 132 KFITAIHKTNGILD 145


>dbj|GAV69795.1| gag_pre-integrs domain-containing protein [Cephalotus follicularis]
          Length = 163

 Score =  122 bits (307), Expect = 6e-33
 Identities = 59/134 (44%), Positives = 86/134 (64%), Gaps = 6/134 (4%)
 Frame = -2

Query: 385 WHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGSVIIGDV 206
           WHVP LKKN++SLG L++ GC FSGE+  + + RG  +++K ++   LY+L G+ ++G V
Sbjct: 12  WHVPGLKKNLISLGVLDSHGCKFSGENGIIKVFRGALVIMKGKKIDGLYQLQGNTVLGTV 71

Query: 205 SAVAE------DDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMGKQRRV 44
           +  +       D T LWH+ LGHM E+ LQ++  K +L+G +  KLDFC   V GKQ RV
Sbjct: 72  AVASSLGDKDADTTRLWHIRLGHMSERELQIMSKKGLLAGAKLGKLDFCEHYVYGKQCRV 131

Query: 43  PFFTLQHKSEGALD 2
              T  HK++G LD
Sbjct: 132 KISTSIHKTKGILD 145


>ref|XP_020250324.1| uncharacterized protein LOC109827718 [Asparagus officinalis]
          Length = 191

 Score =  122 bits (306), Expect = 2e-32
 Identities = 57/137 (41%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
 Frame = -2

Query: 403 KTISGVWHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGS 224
           +T+S + H+PDLKKN++SL +L++ GC+++GE   + +++G  +++K  +  +LY L GS
Sbjct: 45  RTLSDMRHIPDLKKNLISLSSLDSIGCSYTGEGGALRVTKGSLVVMKGSKVNSLYVLQGS 104

Query: 223 VIIGDVSAVAE---DDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMGKQ 53
            + G  S  ++   D T LWHM LGHM EKG+ +L  + +L G     LDFC  CV GKQ
Sbjct: 105 TVTGSASVYSDVDRDTTQLWHMRLGHMSEKGVTILSKRGLLCGDHTSSLDFCEHCVFGKQ 164

Query: 52  RRVPFFTLQHKSEGALD 2
            RV F T  H ++  LD
Sbjct: 165 TRVSFSTGSHTTKDTLD 181


>ref|XP_016457574.1| PREDICTED: uncharacterized mitochondrial protein AtMg00300-like
           [Nicotiana tabacum]
          Length = 202

 Score =  121 bits (303), Expect = 7e-32
 Identities = 59/139 (42%), Positives = 86/139 (61%), Gaps = 5/139 (3%)
 Frame = -2

Query: 403 KTISGVWHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGS 224
           +TI+ V HVPDLKKN++SL  L+ QG  +  E   + +++G  ++LK +    LY L GS
Sbjct: 44  RTITQVRHVPDLKKNLISLSTLDEQGYRYMSEAGTIKVTKGSLVMLKGKLENGLYTLAGS 103

Query: 223 VIIGDVSAVA-----EDDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMG 59
            I+G  +A       +D   LWHM LGHM  +GL++L  + +L G +   LDFC  CV+G
Sbjct: 104 TIVGSANASTVQLSNDDKARLWHMRLGHMSARGLEMLSNRTLLEGEKINTLDFCEHCVLG 163

Query: 58  KQRRVPFFTLQHKSEGALD 2
           KQ++V F T +HK+ G LD
Sbjct: 164 KQKKVSFSTGKHKTRGVLD 182


>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
          Length = 876

 Score =  127 bits (319), Expect = 2e-31
 Identities = 57/139 (41%), Positives = 98/139 (70%), Gaps = 5/139 (3%)
 Frame = -2

Query: 403 KTISGVWHVPDLKKNILSLGALEAQGCTFSGEDDN--VTISRGFTILLKWERTR-NLYKL 233
           +T++ V ++P+L+KN++SLG L+  G ++  + D   + +S+G   +++ +RT  N+YKL
Sbjct: 263 RTLTNVRYIPELRKNLISLGTLQENGYSYRSDRDRDILKVSKGALTVMRVKRTAGNIYKL 322

Query: 232 VGSVIIGDVSAVAEDD--T*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMG 59
           +G+ ++GDV++V  D+  T LWH+ LGH+ E+G+  LH + +L G+  CK+D C +CV+G
Sbjct: 323 LGNTVVGDVASVESDNDATKLWHLRLGHLSERGMMELHKRSLLKGVCSCKMDLCKYCVLG 382

Query: 58  KQRRVPFFTLQHKSEGALD 2
           KQ RV F  ++HK+EG LD
Sbjct: 383 KQCRVRFKPMKHKTEGILD 401


>ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116374, partial [Tarenaya
           hassleriana]
          Length = 209

 Score =  119 bits (298), Expect = 5e-31
 Identities = 63/139 (45%), Positives = 86/139 (61%), Gaps = 5/139 (3%)
 Frame = -2

Query: 403 KTISGVWHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGS 224
           + ++ V +VP+LKKN++SLG LE++G T +  D  + +  G  ++LK  R  NLY   GS
Sbjct: 53  RILTEVRYVPNLKKNLISLGTLESKGYTVTIRDGILKVVSGALVVLKGVRKNNLYYFKGS 112

Query: 223 VIIGDVSAVAEDD-----T*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMG 59
            +IG V+  A +D     T LWHM LGH  EK LQ L  + +L G R CKL+FC  CV+G
Sbjct: 113 TVIGTVAVTAGEDKDSEVTRLWHMRLGHPGEKALQNLVKQGVLKGARLCKLEFCEHCVLG 172

Query: 58  KQRRVPFFTLQHKSEGALD 2
           KQ +V F T  H +EG LD
Sbjct: 173 KQSKVKFGTAIHNTEGILD 191


>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Capsicum baccatum]
          Length = 1526

 Score =  125 bits (315), Expect = 9e-31
 Identities = 62/136 (45%), Positives = 91/136 (66%), Gaps = 2/136 (1%)
 Frame = -2

Query: 403 KTISGVWHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGS 224
           +T++ V HVPDLK+N++SLG LE+QGC +S E   + +S+G  +LLK  R+ +LY L GS
Sbjct: 71  RTLTSVRHVPDLKRNLISLGTLESQGCRYSAEGGVLKVSKGAFVLLKAIRSGSLYLLQGS 130

Query: 223 VIIGD--VSAVAEDDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMGKQR 50
            +IG   +++  +D+T LWH+ LGHM EKG+Q+L  K  L      K+DF   C+ GKQR
Sbjct: 131 TVIGSETIASSNKDNTKLWHLRLGHMSEKGIQILKKKGYLGNHCTGKVDFYEHCIFGKQR 190

Query: 49  RVPFFTLQHKSEGALD 2
           +V F    H+++G LD
Sbjct: 191 KVSFSKAIHRTKGTLD 206


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score =  124 bits (310), Expect = 4e-30
 Identities = 62/138 (44%), Positives = 88/138 (63%), Gaps = 4/138 (2%)
 Frame = -2

Query: 403 KTISGVWHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGS 224
           KT+S V  +PDLK+N++SLG LE+ GC +S E   + +S+G  +LLK  R  +LY L GS
Sbjct: 341 KTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGS 400

Query: 223 VIIGDVSAVA----EDDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMGK 56
           ++ G  +  +    +D T LWHM LGHM EKG+ +L  + +L      KL+FC  CV GK
Sbjct: 401 IVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGK 460

Query: 55  QRRVPFFTLQHKSEGALD 2
           Q+RV F T  H+++G LD
Sbjct: 461 QKRVSFSTATHRTKGTLD 478


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1032

 Score =  124 bits (310), Expect = 4e-30
 Identities = 62/138 (44%), Positives = 88/138 (63%), Gaps = 4/138 (2%)
 Frame = -2

Query: 403 KTISGVWHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGS 224
           KT+S V  +PDLK+N++SLG LE+ GC +S E   + +S+G  +LLK  R  +LY L GS
Sbjct: 45  KTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGS 104

Query: 223 VIIGDVSAVA----EDDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMGK 56
           ++ G  +  +    +D T LWHM LGHM EKG+ +L  + +L      KL+FC  CV GK
Sbjct: 105 IVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGK 164

Query: 55  QRRVPFFTLQHKSEGALD 2
           Q+RV F T  H+++G LD
Sbjct: 165 QKRVSFSTATHRTKGTLD 182


>gb|KYP46867.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 253

 Score =  112 bits (281), Expect = 5e-28
 Identities = 57/129 (44%), Positives = 82/129 (63%), Gaps = 5/129 (3%)
 Frame = -2

Query: 388 VWHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGSVIIGD 209
           VW+VP L+KN++S+GAL+ QG +FSG D ++T+S+G  +++K +    +Y ++G+   G 
Sbjct: 31  VWYVPGLQKNLISIGALDKQGYSFSGNDGHITVSKGALVVMKGKLQHGIYVMLGNSFQGT 90

Query: 208 VSAVAE-----DDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMGKQRRV 44
           VS         D+T LWH  LGHM E+GL VL  + +L G    KL FC  CVMGKQRR+
Sbjct: 91  VSISHSIEQHVDNTKLWHCRLGHMSERGLVVLSKQGLLGGAVTGKLKFCESCVMGKQRRL 150

Query: 43  PFFTLQHKS 17
            F   +H S
Sbjct: 151 KFNHGKHTS 159


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  117 bits (294), Expect = 6e-28
 Identities = 55/128 (42%), Positives = 79/128 (61%)
 Frame = -2

Query: 385  WHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGSVIIGDV 206
            W+VP L+KN++S+G L+  G TFSG    + +S+G  +++K      +Y L+GS ++G  
Sbjct: 678  WYVPGLRKNLISVGTLDKNGYTFSGSGGVLRVSKGALVVMKGRLQHGIYTLMGSSVLGTA 737

Query: 205  SAVAEDDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMGKQRRVPFFTLQ 26
            +   ++ T LWH  LGHM EKGL +L  + +LSG    KL FC  CVMGKQRRV F    
Sbjct: 738  AVEEDNCTELWHRRLGHMSEKGLSILSKQGLLSGAETGKLKFCETCVMGKQRRVKFSMGS 797

Query: 25   HKSEGALD 2
            H + G L+
Sbjct: 798  HTTNGVLE 805


>gb|AAC12735.1| putative retrovirus-related polyprotein, partial [Lithospermum
           erythrorhizon]
          Length = 244

 Score =  110 bits (275), Expect = 3e-27
 Identities = 59/139 (42%), Positives = 82/139 (58%), Gaps = 6/139 (4%)
 Frame = -2

Query: 400 TISGVWHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGSV 221
           T++ V H+ DL KN++SL  LE  GC    ED  + + R   +++K     NLY LVG++
Sbjct: 30  TLNDVRHIQDLHKNLISLRLLEKNGCKIVLEDGVLKVVRRSLVVMKGVSHGNLYPLVGTM 89

Query: 220 IIGD--VSAVAEDD----T*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVMG 59
           + GD  V  V   D    T +WHM LGHM EKGL +L G+ +L  ++K  ++FC   V G
Sbjct: 90  VTGDLAVGVVGHKDQTECTMIWHMRLGHMSEKGLSLLSGQGLLKNMKKSCMEFCEHWVYG 149

Query: 58  KQRRVPFFTLQHKSEGALD 2
           K  R+ FFT +HKS G LD
Sbjct: 150 KTHRLKFFTSKHKSRGLLD 168


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  115 bits (287), Expect = 5e-27
 Identities = 59/140 (42%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
 Frame = -2

Query: 403 KTISGVWHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGS 224
           + +  V +VP LKKN++SLGALE++G   +  D  +  + G  ++LK     NLY   GS
Sbjct: 279 RILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKATSGALVMLKGVMKNNLYYYQGS 338

Query: 223 VIIGDVSAVAEDD------T*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCVM 62
            ++G V+A           T LWHM LGH  EK LQ+   + +L G + CKL+FC  CV+
Sbjct: 339 TVVGTVAAATSSSKKDAEATKLWHMRLGHAGEKSLQIFTKQGLLKGTKACKLEFCEHCVL 398

Query: 61  GKQRRVPFFTLQHKSEGALD 2
           GKQRRV F T  H ++G LD
Sbjct: 399 GKQRRVKFGTAIHNTKGILD 418


>dbj|GAV72214.1| gag_pre-integrs domain-containing protein/UBN2_2 domain-containing
           protein, partial [Cephalotus follicularis]
          Length = 265

 Score =  110 bits (274), Expect = 7e-27
 Identities = 49/113 (43%), Positives = 75/113 (66%), Gaps = 6/113 (5%)
 Frame = -2

Query: 385 WHVPDLKKNILSLGALEAQGCTFSGEDDNVTISRGFTILLKWERTRNLYKLVGSVIIGDV 206
           WHV  LKKN +SLG L++ GC F+GE++ + + RG  +++K ++   LY+L G++++G  
Sbjct: 153 WHVLGLKKNPISLGVLDSHGCKFTGENEIIKVLRGALVIMKGKKIDGLYQLQGNIVLGTA 212

Query: 205 SAVAE------DDT*LWHMHLGHMREKGLQVLHGKDILSGIRKCKLDFCNFCV 65
           +  +       D T LWHM LGHM E+GLQ+L  K +L+G++  KLDFC  CV
Sbjct: 213 AVASSSGDKDADTTRLWHMRLGHMSERGLQILSKKGLLAGVKSGKLDFCEHCV 265