BLASTX nr result

ID: Ophiopogon27_contig00036239 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00036239
         (531 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020243738.1| pentatricopeptide repeat-containing protein ...    56   5e-06

>ref|XP_020243738.1| pentatricopeptide repeat-containing protein At5g66520-like
           [Asparagus officinalis]
          Length = 436

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/56 (46%), Positives = 34/56 (60%)
 Frame = +2

Query: 362 YLTFPSLVKCCSHHRIYVIGQALHSHIFNFDHHCNTFIQRSLIFMYYTSVHIMLTR 529
           +LTFP L+K CS H  +V G+ALHSHIF      + +I  SL+FMY     + L R
Sbjct: 10  HLTFPFLLKSCSLHHAHVTGRALHSHIFRLGFVADVYINNSLVFMYSACGQVELAR 65


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