BLASTX nr result

ID: Ophiopogon27_contig00036196 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00036196
         (485 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020272320.1| uncharacterized protein LOC109847501 [Aspara...    53   2e-11

>ref|XP_020272320.1| uncharacterized protein LOC109847501 [Asparagus officinalis]
 gb|ONK79155.1| uncharacterized protein A4U43_C01F3490 [Asparagus officinalis]
          Length = 306

 Score = 53.1 bits (126), Expect(2) = 2e-11
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = -3

Query: 255 NKEKQTSRKVQQTSGLLKDIRSLRARVASVIKAQIDDK 142
           +++KQ + KVQQTSGLLKDI S+R RVAS+IKAQ D K
Sbjct: 258 SEQKQMNTKVQQTSGLLKDIHSIRERVASIIKAQTDRK 295



 Score = 43.1 bits (100), Expect(2) = 2e-11
 Identities = 21/38 (55%), Positives = 30/38 (78%)
 Frame = -1

Query: 353 STREVFLQYVDGQLQTVESVLVMFLKLSTLMFEIKKSR 240
           S+ E FLQYVDG+LQ VES L MFL++STL+ + ++ +
Sbjct: 225 SSYEEFLQYVDGKLQQVESELDMFLRVSTLILDSEQKQ 262


Top