BLASTX nr result

ID: Ophiopogon27_contig00035966 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00035966
         (394 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020262033.1| protein STICHEL-like isoform X2 [Asparagus o...   150   6e-40
ref|XP_020262027.1| protein STICHEL-like isoform X1 [Asparagus o...   150   2e-39
emb|CBI29623.3| unnamed protein product, partial [Vitis vinifera]      66   5e-10
ref|XP_006385102.1| STICHEL family protein [Populus trichocarpa]       65   2e-09
ref|XP_020252955.1| protein STICHEL-like isoform X2 [Asparagus o...    64   5e-09
ref|XP_020252953.1| protein STICHEL-like isoform X1 [Asparagus o...    64   5e-09
gb|PKA65029.1| hypothetical protein AXF42_Ash019041 [Apostasia s...    62   1e-08
gb|AAF43947.1|AC012188_24 Contains similarity to DNA Pol III Gam...    60   1e-07
ref|NP_172898.2| AAA-type ATPase family protein [Arabidopsis tha...    60   1e-07
ref|XP_010476500.1| PREDICTED: protein STICHEL-like 1 [Camelina ...    59   1e-07
ref|XP_010496095.1| PREDICTED: protein STICHEL-like 1 [Camelina ...    59   2e-07
ref|XP_010458942.1| PREDICTED: LOW QUALITY PROTEIN: protein STIC...    59   3e-07
ref|XP_006306619.1| protein STICHEL-like 1 [Capsella rubella] >g...    57   1e-06
gb|EYU33301.1| hypothetical protein MIMGU_mgv1a000429mg [Erythra...    56   2e-06
ref|XP_012842339.1| PREDICTED: protein STICHEL [Erythranthe gutt...    56   2e-06
ref|XP_002892809.1| protein STICHEL-like 1 [Arabidopsis lyrata s...    55   3e-06
ref|XP_010912879.1| PREDICTED: LOW QUALITY PROTEIN: protein STIC...    55   4e-06
ref|XP_020881070.1| protein STICHEL [Arabidopsis lyrata subsp. l...    55   4e-06
gb|KVI11328.1| DNA polymerase III, clamp loader complex, gamma/d...    55   4e-06
ref|XP_023637912.1| protein STICHEL isoform X4 [Capsella rubella]      55   6e-06

>ref|XP_020262033.1| protein STICHEL-like isoform X2 [Asparagus officinalis]
          Length = 583

 Score =  150 bits (378), Expect = 6e-40
 Identities = 87/157 (55%), Positives = 99/157 (63%), Gaps = 26/157 (16%)
 Frame = -1

Query: 394 AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQDSPSSKHTEILE--------- 242
           AERF RSIT+SIA+VL+HNVEVR+GL+PEKYLKSLK   DSP SK ++ +E         
Sbjct: 341 AERFRRSITNSIALVLRHNVEVRMGLLPEKYLKSLKSFPDSPFSKQSQSIEPGRIHASYD 400

Query: 241 ----YLDKGAR-------------KTSVDEQRLEMAWLQDTENSEDPLASCSKESKQENN 113
                +DK  R             KT +DEQRLE AWLQ  ENSE  LA    ESKQE N
Sbjct: 401 MARRSVDKPRRSQDTIDNREQRGKKTCIDEQRLESAWLQAAENSEAALARNLTESKQEKN 460

Query: 112 KNSPEDGTNSQNQFKSLPDPSISFKHWGDGESDEIAE 2
            N  +DGTNS NQ KSL D SISF HW DG+ DEI E
Sbjct: 461 HNLVQDGTNSLNQIKSLTDLSISFNHWKDGDGDEIEE 497


>ref|XP_020262027.1| protein STICHEL-like isoform X1 [Asparagus officinalis]
 ref|XP_020262028.1| protein STICHEL-like isoform X1 [Asparagus officinalis]
 ref|XP_020262029.1| protein STICHEL-like isoform X1 [Asparagus officinalis]
 ref|XP_020262030.1| protein STICHEL-like isoform X1 [Asparagus officinalis]
 ref|XP_020262031.1| protein STICHEL-like isoform X1 [Asparagus officinalis]
 ref|XP_020262032.1| protein STICHEL-like isoform X1 [Asparagus officinalis]
 gb|ONK73239.1| uncharacterized protein A4U43_C04F28820 [Asparagus officinalis]
          Length = 1130

 Score =  150 bits (378), Expect = 2e-39
 Identities = 87/157 (55%), Positives = 99/157 (63%), Gaps = 26/157 (16%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQDSPSSKHTEILE--------- 242
            AERF RSIT+SIA+VL+HNVEVR+GL+PEKYLKSLK   DSP SK ++ +E         
Sbjct: 888  AERFRRSITNSIALVLRHNVEVRMGLLPEKYLKSLKSFPDSPFSKQSQSIEPGRIHASYD 947

Query: 241  ----YLDKGAR-------------KTSVDEQRLEMAWLQDTENSEDPLASCSKESKQENN 113
                 +DK  R             KT +DEQRLE AWLQ  ENSE  LA    ESKQE N
Sbjct: 948  MARRSVDKPRRSQDTIDNREQRGKKTCIDEQRLESAWLQAAENSEAALARNLTESKQEKN 1007

Query: 112  KNSPEDGTNSQNQFKSLPDPSISFKHWGDGESDEIAE 2
             N  +DGTNS NQ KSL D SISF HW DG+ DEI E
Sbjct: 1008 HNLVQDGTNSLNQIKSLTDLSISFNHWKDGDGDEIEE 1044


>emb|CBI29623.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1078

 Score = 66.2 bits (160), Expect = 5e-10
 Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 27/156 (17%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYL--------------KSLKPLQDSPSSKH 257
            AERFL SIT+SI IV++ NVEV+I L+P+  +               +  PL D      
Sbjct: 820  AERFLSSITNSIEIVMRSNVEVKIILLPDGEISMNMKAVGGGSRDPSNCSPLLDRTFGPT 879

Query: 256  TEILE-YLDKGARK------------TSVDEQRLEMAWLQDTENSEDPLASCSKESKQEN 116
             E+ E ++++ + K            + + EQRLE AWLQ  E       S     K E 
Sbjct: 880  DELAEGHIERSSTKERNQEIPMHRIDSIIREQRLETAWLQVAEKGTPRSMS---RLKPEK 936

Query: 115  NKNSPEDGTNSQNQFKSLPDPSISFKHWGDGESDEI 8
            N+  P+DGT  QNQ +S+    +  + W D  + EI
Sbjct: 937  NQILPQDGTYRQNQVESMNSVGVPSQKWEDELNHEI 972


>ref|XP_006385102.1| STICHEL family protein [Populus trichocarpa]
          Length = 1197

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLK--PLQDSPSSKHTEILEYLDKGAR 221
            AERFL SIT+SI IVL+ NVEVRI L+ ++    L      D+ +  + E    +     
Sbjct: 984  AERFLSSITNSIEIVLRRNVEVRIILITDEEFPKLSKGSFNDANAENNGEGKREMPMQRI 1043

Query: 220  KTSVDEQRLEMAWLQDTENSEDPLASCSKESKQENNKNSPEDGTNSQNQ 74
            ++ + EQRLE AWLQ  E       SC    K E N+  P+D T  QN+
Sbjct: 1044 ESIIREQRLETAWLQAAEKGTPGSLSC---LKPEKNQVLPQDDTYQQNE 1089


>ref|XP_020252955.1| protein STICHEL-like isoform X2 [Asparagus officinalis]
          Length = 1139

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 53/150 (35%), Positives = 71/150 (47%), Gaps = 29/150 (19%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQ---DSPS-------------- 266
            AER+L SI  S  IVL+HNVEVRIGL    Y  S   ++   DS S              
Sbjct: 890  AERYLNSIKSSFEIVLQHNVEVRIGLQSNPYSPSFNHIEKNRDSTSLKVSCNDKCKGIPN 949

Query: 265  ----------SKHTEILEYLDKGARKTS--VDEQRLEMAWLQDTENSEDPLASCSKESKQ 122
                      ++  + LE  D   +K +  V E RLE AWLQ ++ +   L+S S  +K 
Sbjct: 950  LPRKRLECSEARQQKTLEQGDSSLQKHADVVVEHRLERAWLQASDKNSIDLSSQSNPNK- 1008

Query: 121  ENNKNSPEDGTNSQNQFKSLPDPSISFKHW 32
              N+  PE+G + +N   SL    IS KHW
Sbjct: 1009 --NQILPENGVSCENHKMSL----ISSKHW 1032


>ref|XP_020252953.1| protein STICHEL-like isoform X1 [Asparagus officinalis]
 ref|XP_020252954.1| protein STICHEL-like isoform X1 [Asparagus officinalis]
 gb|ONK77320.1| uncharacterized protein A4U43_C02F5320 [Asparagus officinalis]
          Length = 1147

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 53/150 (35%), Positives = 71/150 (47%), Gaps = 29/150 (19%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQ---DSPS-------------- 266
            AER+L SI  S  IVL+HNVEVRIGL    Y  S   ++   DS S              
Sbjct: 898  AERYLNSIKSSFEIVLQHNVEVRIGLQSNPYSPSFNHIEKNRDSTSLKVSCNDKCKGIPN 957

Query: 265  ----------SKHTEILEYLDKGARKTS--VDEQRLEMAWLQDTENSEDPLASCSKESKQ 122
                      ++  + LE  D   +K +  V E RLE AWLQ ++ +   L+S S  +K 
Sbjct: 958  LPRKRLECSEARQQKTLEQGDSSLQKHADVVVEHRLERAWLQASDKNSIDLSSQSNPNK- 1016

Query: 121  ENNKNSPEDGTNSQNQFKSLPDPSISFKHW 32
              N+  PE+G + +N   SL    IS KHW
Sbjct: 1017 --NQILPENGVSCENHKMSL----ISSKHW 1040


>gb|PKA65029.1| hypothetical protein AXF42_Ash019041 [Apostasia shenzhenica]
          Length = 433

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 30/45 (66%), Positives = 36/45 (80%)
 Frame = -1

Query: 394 AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQDSPSSK 260
           AERFL SIT+SI +VL+ NVEVRIG+VPE YLK+L  L +SP  K
Sbjct: 195 AERFLNSITNSIEVVLRQNVEVRIGIVPESYLKALNSLPESPIEK 239


>gb|AAF43947.1|AC012188_24 Contains similarity to DNA Pol III Gamma and Tau from Chlamydia
            trachomatis gb|AE001306.1 and contains an AAA (ATPase)
            PF|00004 domain [Arabidopsis thaliana]
          Length = 1071

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQD--SPSSKHTEILEYLDKGAR 221
            AERF+ SIT+SI +VL+ NVEVRI L+ E  L + K  +     +S +TE    +     
Sbjct: 928  AERFVSSITNSIEMVLRRNVEVRIILLSETELLNSKQTRQIAVTTSSYTESGNEIPMKRI 987

Query: 220  KTSVDEQRLEMAWLQDTENSEDPLASCSKESKQENNKNSPEDGTNSQNQFK 68
            +  + EQRLE  WLQ T  S+  L       K E N+  P++ TN     K
Sbjct: 988  EAIIQEQRLETEWLQKTPGSQGRL-------KPERNQILPQEDTNGVKVLK 1031


>ref|NP_172898.2| AAA-type ATPase family protein [Arabidopsis thaliana]
 sp|F4HW65.1|STIL1_ARATH RecName: Full=Protein STICHEL-like 1
 gb|AEE29167.1| AAA-type ATPase family protein [Arabidopsis thaliana]
 gb|OAP15335.1| hypothetical protein AXX17_AT1G15060 [Arabidopsis thaliana]
          Length = 1116

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQD--SPSSKHTEILEYLDKGAR 221
            AERF+ SIT+SI +VL+ NVEVRI L+ E  L + K  +     +S +TE    +     
Sbjct: 921  AERFVSSITNSIEMVLRRNVEVRIILLSETELLNSKQTRQIAVTTSSYTESGNEIPMKRI 980

Query: 220  KTSVDEQRLEMAWLQDTENSEDPLASCSKESKQENNKNSPEDGTNSQNQFK 68
            +  + EQRLE  WLQ T  S+  L       K E N+  P++ TN     K
Sbjct: 981  EAIIQEQRLETEWLQKTPGSQGRL-------KPERNQILPQEDTNGVKVLK 1024


>ref|XP_010476500.1| PREDICTED: protein STICHEL-like 1 [Camelina sativa]
          Length = 1123

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQD--SPSSKHTEILEYLDKGAR 221
            AERFL S+T+SI +VL+ NVEVRI L+ E  L + K  +     +S  TE    +     
Sbjct: 928  AERFLSSVTNSIEMVLRRNVEVRIILLSETELLTSKQTRQIAVTTSSDTESGNEIPMKRI 987

Query: 220  KTSVDEQRLEMAWLQDTENSEDPLASCSKESKQENNKNSPEDGTNSQNQFK 68
            +  + EQRLE  WLQ T  S+  L       K E N+  P++ TN     K
Sbjct: 988  EAIIQEQRLETEWLQKTPGSQGRL-------KPERNQVLPQEDTNGVQVLK 1031


>ref|XP_010496095.1| PREDICTED: protein STICHEL-like 1 [Camelina sativa]
          Length = 1149

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQD--SPSSKHTEILEYLDKGAR 221
            AERFL S+T+SI +VL+ NVEVRI L+ E  L + K  +     +S  TE    +     
Sbjct: 954  AERFLSSVTNSIEMVLRRNVEVRIILLSETELLNSKQTRQIAVTTSSDTESGNDIPMKRI 1013

Query: 220  KTSVDEQRLEMAWLQDTENSEDPLASCSKESKQENNKNSPEDGTNSQNQFK 68
            +  + EQRLE  WLQ T  S+  L       K E N+  P++ TN     K
Sbjct: 1014 EAIIQEQRLETEWLQKTPGSQGRL-------KPERNQVLPQEDTNGVKVLK 1057


>ref|XP_010458942.1| PREDICTED: LOW QUALITY PROTEIN: protein STICHEL-like 1 [Camelina
            sativa]
          Length = 1578

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQD--SPSSKHTEILEYLDKGAR 221
            AERFL S+T+SI +VL+ NVEVRI L+ E  L + K  +     +S  TE    +     
Sbjct: 1383 AERFLSSVTNSIEMVLRRNVEVRIILLSETELLNSKQTRQIAVTTSSDTESGNEIPMKRI 1442

Query: 220  KTSVDEQRLEMAWLQDTENSEDPLASCSKESKQENNKNSPEDGTNSQNQFK 68
            +  + EQRLE  WLQ T  S+  L       K E N+  P++ TN     K
Sbjct: 1443 EAIIQEQRLETEWLQKTPASQGRL-------KPERNQVLPQEDTNGVKVLK 1486


>ref|XP_006306619.1| protein STICHEL-like 1 [Capsella rubella]
 gb|EOA39517.1| hypothetical protein CARUB_v10008136mg [Capsella rubella]
          Length = 1146

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQD--SPSSKHTEILEYLDKGAR 221
            AERFL S+T+SI  VL+ NVEVRI L+ E  L + K  +     +S  TE    +     
Sbjct: 950  AERFLSSVTNSIETVLRRNVEVRIILLSETELLNTKQTRQIAVTTSSDTESGHEIPMKRI 1009

Query: 220  KTSVDEQRLEMAWLQDTENSEDPLASCSKESKQENNKNSPEDGTNSQNQFK 68
            +  + EQR E  WLQ T  S+  L       K E N+  P++ TN     K
Sbjct: 1010 EAIIQEQRSETEWLQKTPGSQGRL-------KPERNQVLPQEDTNGVKVLK 1053


>gb|EYU33301.1| hypothetical protein MIMGU_mgv1a000429mg [Erythranthe guttata]
          Length = 1158

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQDSPSSKHTEILEYLDKGARK- 218
            AE FL SIT+S  IVL+HNVEV+I L+P+  LK        P+  H ++ E  +    K 
Sbjct: 939  AEGFLSSITNSFEIVLRHNVEVKIILLPDSLLK--------PNQHHDDVSESANMSTSKG 990

Query: 217  --------------TSVDEQRLEMAWLQDTENSEDPLASCSKESKQENNKNSPEDGT 89
                          + + EQRLE AWLQ  E    P          + N+  P+DG+
Sbjct: 991  GSRLANVPPAKRIESIIHEQRLETAWLQAMERGGTP--------GSKRNQILPQDGS 1039


>ref|XP_012842339.1| PREDICTED: protein STICHEL [Erythranthe guttata]
          Length = 1192

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQDSPSSKHTEILEYLDKGARK- 218
            AE FL SIT+S  IVL+HNVEV+I L+P+  LK        P+  H ++ E  +    K 
Sbjct: 954  AEGFLSSITNSFEIVLRHNVEVKIILLPDSLLK--------PNQHHDDVSESANMSTSKG 1005

Query: 217  --------------TSVDEQRLEMAWLQDTENSEDPLASCSKESKQENNKNSPEDGT 89
                          + + EQRLE AWLQ  E    P          + N+  P+DG+
Sbjct: 1006 GSRLANVPPAKRIESIIHEQRLETAWLQAMERGGTP--------GSKRNQILPQDGS 1054


>ref|XP_002892809.1| protein STICHEL-like 1 [Arabidopsis lyrata subsp. lyrata]
 gb|EFH69068.1| hypothetical protein ARALYDRAFT_888824 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1130

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQDS--PSSKHTEILEYLDKGAR 221
            AERF+ SIT+SI +VL+ NVEVRI L+ E  L + K  + +   +S   E    +     
Sbjct: 935  AERFVSSITNSIEMVLRRNVEVRIILLSETELLNSKQTRQTAVTTSSDNESGNEIPMKRI 994

Query: 220  KTSVDEQRLEMAWLQDTENSEDPLASCSKESKQENNKNSPEDGTNSQNQFK 68
            +  + EQRLE  WLQ    S+  L       K E N+  P++ TN     K
Sbjct: 995  EAIIQEQRLETEWLQKIPGSQGRL-------KPERNQILPQEDTNGVKVLK 1038


>ref|XP_010912879.1| PREDICTED: LOW QUALITY PROTEIN: protein STICHEL-like, partial
           [Elaeis guineensis]
          Length = 962

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 32/62 (51%), Positives = 41/62 (66%)
 Frame = -1

Query: 394 AERFLRSITDSIAIVLKHNVEVRIGLVPEKYLKSLKPLQDSPSSKHTEILEYLDKGARKT 215
           AERFLRSIT+S+ IVL+ NVEVR+GLV E +      + +SP S  TE +  LDK  +  
Sbjct: 662 AERFLRSITNSMEIVLRRNVEVRLGLVTETF------MSNSPISNKTEKIRNLDKERKVE 715

Query: 214 SV 209
           SV
Sbjct: 716 SV 717


>ref|XP_020881070.1| protein STICHEL [Arabidopsis lyrata subsp. lyrata]
 gb|EFH51389.1| hypothetical protein ARALYDRAFT_484163 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1222

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 22/151 (14%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYL-----KSLKPLQDSPSSKHTEIL----- 245
            AERFL SIT+SI +VL+ +VEVRI L+PE  L     ++ KP   + S     I      
Sbjct: 967  AERFLSSITNSIEMVLRRSVEVRIILLPETELLIVPHQTRKPEMTNKSGHLNNIAGINAE 1026

Query: 244  EYLDKGARKTS------------VDEQRLEMAWLQDTENSEDPLASCSKESKQENNKNSP 101
              ++ G+ + S            + EQRLE AWLQ  +  +D   S  +   + N     
Sbjct: 1027 SDVEVGSSEESRSKLPMQRIESIIREQRLETAWLQTAD--KDTPGSIIRVKPERNQILPQ 1084

Query: 100  EDGTNSQNQFKSLPDPSISFKHWGDGESDEI 8
            ED     N   ++    ++  HW D  ++E+
Sbjct: 1085 EDTYRQPNVASAISSSGLTTHHWVDELNNEV 1115


>gb|KVI11328.1| DNA polymerase III, clamp loader complex, gamma/delta/delta subunit,
            C-terminal [Cynara cardunculus var. scolymus]
          Length = 1238

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 51/158 (32%), Positives = 69/158 (43%), Gaps = 29/158 (18%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRI------GLVPEKYL--KSLKPLQD----------SP 269
            AERFL SIT+S  IVL  N+EVRI      G  P   L  K +  LQ+            
Sbjct: 990  AERFLSSITNSFEIVLCRNIEVRIIFLSDDGTAPNSVLAQKQIDSLQEPIKASGGSFHDA 1049

Query: 268  SSKHTEILEYLDKGAR-----------KTSVDEQRLEMAWLQDTENSEDPLASCSKESKQ 122
             SK + +L   D G +           ++ + EQRLE AWLQ  E             K 
Sbjct: 1050 GSKSSGVLAEGDGGTKGRKSGNPVQRIESIIHEQRLETAWLQTAEKG---TPGSLNRLKP 1106

Query: 121  ENNKNSPEDGTNSQNQFKSLPDPSISFKHWGDGESDEI 8
            E N+  P+DG++   +     DPS S + W D  + E+
Sbjct: 1107 ERNQVLPQDGSDHHQRQMVSNDPS-SQQQWEDELTREL 1143


>ref|XP_023637912.1| protein STICHEL isoform X4 [Capsella rubella]
          Length = 1238

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
 Frame = -1

Query: 394  AERFLRSITDSIAIVLKHNVEVRIGLVPEKYL-----KSLKPLQDSPS---------SKH 257
            AERFL SIT+SI +VL+ +VEVRI L+PE  L     ++ KP   + S         +  
Sbjct: 986  AERFLSSITNSIEMVLRRSVEVRIILLPETELLIAPHQTRKPEMTNKSGLLNTIAGLNAE 1045

Query: 256  TEILEYLDKGAR--------KTSVDEQRLEMAWLQDTENSEDPLASCSKESKQENNKNSP 101
            T++ +   + +R        ++ + EQRLE AWLQ  +  +D   S  +   + N     
Sbjct: 1046 TDVEDGSSEESRSKLPMQRIESIIREQRLETAWLQTAD--KDTPGSIIRVKPERNQILPQ 1103

Query: 100  EDGTNSQNQFKSLPDPSISFKHWGDGESDEI 8
            ED     N   ++    ++  HW D  ++E+
Sbjct: 1104 EDTYRQPNVGSAISSSGLTPHHWVDELNNEV 1134


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