BLASTX nr result
ID: Ophiopogon27_contig00035750
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00035750
(673 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK66092.1| uncharacterized protein A4U43_C06F4070 [Asparagus... 82 3e-15
ref|XP_020269504.1| LOW QUALITY PROTEIN: uncharacterized protein... 82 3e-14
gb|ONK66100.1| uncharacterized protein A4U43_C06F4150 [Asparagus... 81 4e-14
ref|XP_020269228.1| uncharacterized protein At1g04910-like [Aspa... 81 6e-14
gb|AQK65208.1| RNA-binding (RRM/RBD/RNP motifs) family protein [... 73 2e-12
gb|KNA23589.1| hypothetical protein SOVF_023820, partial [Spinac... 72 2e-12
gb|PKA46317.1| hypothetical protein AXF42_Ash021554 [Apostasia s... 72 2e-12
gb|PRQ47186.1| putative nucleotide-binding alpha-beta plait doma... 72 2e-12
ref|XP_019235175.1| PREDICTED: splicing factor 3B subunit 4-like... 72 2e-12
gb|PNY02797.1| splicing factor 3B subunit 4-like protein, partia... 72 2e-12
gb|ONM06097.1| RNA-binding (RRM/RBD/RNP motifs) family protein [... 75 3e-12
ref|XP_009609882.1| PREDICTED: splicing factor 3B subunit 4-like... 72 5e-12
ref|XP_020992005.1| splicing factor 3B subunit 4-like [Arachis d... 73 6e-12
emb|CBI17545.3| unnamed protein product, partial [Vitis vinifera] 72 1e-11
dbj|GAU22420.1| hypothetical protein TSUD_123070 [Trifolium subt... 74 1e-11
gb|AAM65408.1| putative spliceosome associated protein [Arabidop... 73 2e-11
ref|NP_179441.1| RNA-binding (RRM/RBD/RNP motifs) family protein... 73 2e-11
gb|AAK59656.1| putative spliceosome associated protein [Arabidop... 73 2e-11
ref|XP_002886178.1| splicing factor 3B subunit 4 [Arabidopsis ly... 73 2e-11
dbj|BAT11139.1| Os10g0457000, partial [Oryza sativa Japonica Group] 72 2e-11
>gb|ONK66092.1| uncharacterized protein A4U43_C06F4070 [Asparagus officinalis]
Length = 228
Score = 81.6 bits (200), Expect = 3e-15
Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 KEMFKGQSPVVVGIADLGMRERRKFRNFLFIAFYGVCLMLGLVKMLAGGWQGFSGIL-KH 178
+EMFK QS V GI DLG RERR+ N LF+AF GVCLMLG+VK+ AGGW GF+GIL +
Sbjct: 95 REMFKRQSQVA-GIVDLGFRERRRIGNLLFLAFCGVCLMLGVVKIFAGGWLGFTGILEQQ 153
Query: 179 GDYE 190
G+Y+
Sbjct: 154 GEYQ 157
>ref|XP_020269504.1| LOW QUALITY PROTEIN: uncharacterized protein At1g04910-like
[Asparagus officinalis]
Length = 624
Score = 81.6 bits (200), Expect = 3e-14
Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 KEMFKGQSPVVVGIADLGMRERRKFRNFLFIAFYGVCLMLGLVKMLAGGWQGFSGIL-KH 178
+EMFK QS V GI DLG RERR+ N LF+AF GVCLMLG+VK+ AGGW GF+GIL +
Sbjct: 95 REMFKRQSQVA-GIVDLGFRERRRIGNLLFLAFCGVCLMLGVVKIFAGGWLGFTGILEQQ 153
Query: 179 GDYE 190
G+Y+
Sbjct: 154 GEYQ 157
>gb|ONK66100.1| uncharacterized protein A4U43_C06F4150 [Asparagus officinalis]
Length = 402
Score = 80.9 bits (198), Expect = 4e-14
Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +2
Query: 2 KEMFKGQSPVVVGIADLGMRERRKFRNFLFIAFYGVCLMLGLVKMLAGGWQGFSGIL-KH 178
+EMFK QS V GI DLG RERR+ N LF+AF GVCLMLG+VK+ AGGW GF+GIL +
Sbjct: 95 REMFKRQSQVA-GIVDLGFRERRRIGNLLFLAFCGVCLMLGVVKIFAGGWLGFTGILEQQ 153
Query: 179 GDY 187
G+Y
Sbjct: 154 GEY 156
>ref|XP_020269228.1| uncharacterized protein At1g04910-like [Asparagus officinalis]
Length = 628
Score = 80.9 bits (198), Expect = 6e-14
Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +2
Query: 2 KEMFKGQSPVVVGIADLGMRERRKFRNFLFIAFYGVCLMLGLVKMLAGGWQGFSGIL-KH 178
+EMFK QS V GI DLG RERR+ N LF+AF GVCLMLG+VK+ AGGW GF+GIL +
Sbjct: 95 REMFKRQSQVA-GIVDLGFRERRRIGNLLFLAFCGVCLMLGVVKIFAGGWLGFTGILEQQ 153
Query: 179 GDY 187
G+Y
Sbjct: 154 GEY 156
>gb|AQK65208.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
Length = 154
Score = 72.8 bits (177), Expect = 2e-12
Identities = 35/44 (79%), Positives = 40/44 (90%)
Frame = +1
Query: 415 D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPKESME 546
D KSL VGANLF+GNLD DVDEKLLYDTFSAFGVIV+NPK +++
Sbjct: 104 DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKVTVD 147
>gb|KNA23589.1| hypothetical protein SOVF_023820, partial [Spinacia oleracea]
Length = 143
Score = 72.4 bits (176), Expect = 2e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +1
Query: 415 D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPK 534
D KSL VGANLFVGNLD DVDEKLLYDTFSAFGVIV+NPK
Sbjct: 104 DKKSLDVGANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
>gb|PKA46317.1| hypothetical protein AXF42_Ash021554 [Apostasia shenzhenica]
Length = 132
Score = 72.0 bits (175), Expect = 2e-12
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +1
Query: 415 D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPK 534
D KSL VGANLFVGNLD DVDEKLLYDTFSAFGV+V+NPK
Sbjct: 68 DKKSLDVGANLFVGNLDPDVDEKLLYDTFSAFGVVVTNPK 107
>gb|PRQ47186.1| putative nucleotide-binding alpha-beta plait domain-containing
protein [Rosa chinensis]
Length = 152
Score = 72.4 bits (176), Expect = 2e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +1
Query: 415 D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPK 534
D KSL VGANLFVGNLD DVDEKLLYDTFSAFGVIV+NPK
Sbjct: 80 DKKSLDVGANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPK 119
>ref|XP_019235175.1| PREDICTED: splicing factor 3B subunit 4-like [Nicotiana attenuata]
Length = 155
Score = 72.4 bits (176), Expect = 2e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +1
Query: 415 D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPK 534
D KS+ VGANLFVGNLD DVDEKLLYDTFSAFGVIVSNPK
Sbjct: 104 DKKSVDVGANLFVGNLDPDVDEKLLYDTFSAFGVIVSNPK 143
>gb|PNY02797.1| splicing factor 3B subunit 4-like protein, partial [Trifolium
pratense]
Length = 143
Score = 72.0 bits (175), Expect = 2e-12
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +1
Query: 415 D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPK 534
D KSL VGANLF+GNLD DVDEKLLYDTFSAFGVIV+NPK
Sbjct: 104 DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
>gb|ONM06097.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
Length = 311
Score = 74.7 bits (182), Expect = 3e-12
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +1
Query: 415 D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPKESMEG 549
D KSL VGANLF+GNLD DVDEKLLYDTFSAFGVIV+NPK+ +G
Sbjct: 104 DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKKDTKG 148
>ref|XP_009609882.1| PREDICTED: splicing factor 3B subunit 4-like [Nicotiana
tomentosiformis]
Length = 189
Score = 72.4 bits (176), Expect = 5e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +1
Query: 415 D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPK 534
D KS+ VGANLFVGNLD DVDEKLLYDTFSAFGVIVSNPK
Sbjct: 104 DKKSVDVGANLFVGNLDPDVDEKLLYDTFSAFGVIVSNPK 143
>ref|XP_020992005.1| splicing factor 3B subunit 4-like [Arachis duranensis]
Length = 241
Score = 73.2 bits (178), Expect = 6e-12
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +1
Query: 415 D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPKESME 546
D KSL VGANLF+GNLD DVDEKLLYDTFSAFGVIV+NPK S++
Sbjct: 43 DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKFSVK 86
>emb|CBI17545.3| unnamed protein product, partial [Vitis vinifera]
Length = 238
Score = 72.4 bits (176), Expect = 1e-11
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +1
Query: 415 D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPK 534
D KSL VGANLFVGNLD DVDEKLLYDTFSAFGVIV+NPK
Sbjct: 104 DKKSLDVGANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
>dbj|GAU22420.1| hypothetical protein TSUD_123070 [Trifolium subterraneum]
Length = 440
Score = 73.9 bits (180), Expect = 1e-11
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +1
Query: 415 D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPKESM 543
D KSL VGANLF+GNLD DVDEKLLYDTFSAFGVIV+NPK M
Sbjct: 104 DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKNDM 146
>gb|AAM65408.1| putative spliceosome associated protein [Arabidopsis thaliana]
Length = 363
Score = 73.2 bits (178), Expect = 2e-11
Identities = 38/52 (73%), Positives = 40/52 (76%), Gaps = 8/52 (15%)
Frame = +1
Query: 403 HGRP--------D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPK 534
HG+P D KSL VGANLF+GNLD DVDEKLLYDTFSAFGVI SNPK
Sbjct: 92 HGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIASNPK 143
>ref|NP_179441.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gb|AAD12222.1| putative spliceosome associated protein [Arabidopsis thaliana]
gb|AAN12991.1| putative spliceosome-associated protein [Arabidopsis thaliana]
gb|AEC06776.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gb|OAP11294.1| emb2444 [Arabidopsis thaliana]
Length = 363
Score = 73.2 bits (178), Expect = 2e-11
Identities = 38/52 (73%), Positives = 40/52 (76%), Gaps = 8/52 (15%)
Frame = +1
Query: 403 HGRP--------D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPK 534
HG+P D KSL VGANLF+GNLD DVDEKLLYDTFSAFGVI SNPK
Sbjct: 92 HGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIASNPK 143
>gb|AAK59656.1| putative spliceosome associated protein [Arabidopsis thaliana]
Length = 363
Score = 73.2 bits (178), Expect = 2e-11
Identities = 38/52 (73%), Positives = 40/52 (76%), Gaps = 8/52 (15%)
Frame = +1
Query: 403 HGRP--------D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPK 534
HG+P D KSL VGANLF+GNLD DVDEKLLYDTFSAFGVI SNPK
Sbjct: 92 HGKPMRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIASNPK 143
>ref|XP_002886178.1| splicing factor 3B subunit 4 [Arabidopsis lyrata subsp. lyrata]
gb|EFH62437.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 73.2 bits (178), Expect = 2e-11
Identities = 38/52 (73%), Positives = 40/52 (76%), Gaps = 8/52 (15%)
Frame = +1
Query: 403 HGRP--------D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPK 534
HG+P D KSL VGANLF+GNLD DVDEKLLYDTFSAFGVI SNPK
Sbjct: 92 HGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIASNPK 143
>dbj|BAT11139.1| Os10g0457000, partial [Oryza sativa Japonica Group]
Length = 274
Score = 72.0 bits (175), Expect = 2e-11
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +1
Query: 415 D*KSLVVGANLFVGNLDQDVDEKLLYDTFSAFGVIVSNPK 534
D KSL VGANLF+GNLD DVDEKLLYDTFSAFGVIV+NPK
Sbjct: 23 DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 62