BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00035684
         (780 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||A05190 hypothetical protein 77 - common tobacco chloroplast...    64   6e-10
gb|ATL76545.1| hypothetical protein (plastid) [Chenopodium album]      50   1e-08

>pir||A05190 hypothetical protein 77 - common tobacco chloroplast
 prf||1211235AD ORF 77
          Length = 77

 Score = 64.3 bits (155), Expect = 6e-10
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = -3

Query: 778 NGLFSPVGIGGSIPSLRTVLESFLPHTAQQSILFAVSF 665
           NGLFSP GIG SIPSLRTVLE+FLPHTAQQSIL    F
Sbjct: 35  NGLFSPAGIGSSIPSLRTVLENFLPHTAQQSILLVSHF 72


>gb|ATL76545.1| hypothetical protein (plastid) [Chenopodium album]
          Length = 578

 Score = 50.1 bits (118), Expect(2) = 1e-08
 Identities = 37/96 (38%), Positives = 50/96 (52%)
 Frame = +3

Query: 12  SVITCDYLHYRKKEKKIKLASQY*KKIGFLHMHRPKQRFLSAVARXXXXXXXXXXXX*VR 191
           SVITC YLH +KKE +I +      K G L MHRPK+RFL+   +               
Sbjct: 329 SVITCGYLH-KKKEDQIFIL-----KKGSLQMHRPKRRFLAVAKKKTSYKKY-------- 374

Query: 192 PTYYTLWIKDRIDKESTVKIN*RAFGVDTVKNCLLM 299
              +++ ++ +  + STVKIN   FG    KNCLLM
Sbjct: 375 AILFSISMEKKRSRGSTVKIN--GFGPIHEKNCLLM 408



 Score = 38.1 bits (87), Expect(2) = 1e-08
 Identities = 55/163 (33%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
 Frame = +1

Query: 343 SRSTKVLSSGVASDPKDS--KFFFLMEESLFQR--FYINFIYETEIVTFQKIITI*GISM 510
           SRST VLS GV S+PK+S   +  L  ++ F+     IN  Y  E    + +  +    +
Sbjct: 419 SRSTTVLSGGVGSNPKESFLSYLCLGRKAFFKDSIISINRDYLAENTKERYLCFL----L 474

Query: 511 LHFSEGRRKAKTXXXXXXXXXXXXXXXXXXVNPRKMG*IYDKSNSV----SIGEIKMRPQ 678
           L   E   K K                       K+  I  K NS+    S  +I +  Q
Sbjct: 475 LQVGE---KIKL----------------------KLILIKMKVNSLILFGSSEQINLEIQ 509

Query: 679 KES---------IVEPYEVGNSQVRF*GKELTHLSQPGRTGHS 780
           KES           EP  VGNS VRF GKELT L +PGRT HS
Sbjct: 510 KESHWFGTPKELTAEP--VGNSHVRF-GKELTLLFRPGRTSHS 549