BLASTX nr result

ID: Ophiopogon27_contig00035607 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00035607
         (581 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013026411.1| PREDICTED: putative protein TPRXL, partial [...    45   3e-06
ref|XP_001568166.1| proteophosphoglycan ppg4 [Leishmania brazili...    51   3e-06

>ref|XP_013026411.1| PREDICTED: putative protein TPRXL, partial [Anser cygnoides
           domesticus]
          Length = 236

 Score = 45.4 bits (106), Expect(2) = 3e-06
 Identities = 35/116 (30%), Positives = 53/116 (45%)
 Frame = +3

Query: 33  SERPLTCTRVPPLNASSPAHVSSVKASTNPAPRGCDLEASIGGLFGPFLSSPTPTEGAHG 212
           S  P + +   PL +SS +  S   +S+  +P      +S      PF SS + +     
Sbjct: 29  SPPPSSSSSSSPLPSSSSSSSSPSSSSSLLSPPLSSSSSSSSSSSSPFSSSSSSSS---- 84

Query: 213 PQPTSVELYSKASGPVESAQPTSPACSAPISSLIPPLNPKSTMSGGSSEAPSSPDP 380
           P P S      +S P   + P+SP+ S+P S   PP +  S+ S  SS +PSS  P
Sbjct: 85  PPPPSSSSSPSSSSPSSPSSPSSPSSSSPSS---PPPSSSSSSSSPSSSSPSSSSP 137



 Score = 33.5 bits (75), Expect(2) = 3e-06
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +2

Query: 362 PFLSRPCSAPISKETSATLTVEKNSYCNGSSLH*KT--PQCPTRSSTSMRTSCYRRFSNA 535
           P  S P S+ +S  +S + +   +S  + SSL   +  P   + SS+S  +S     S++
Sbjct: 160 PSSSSPASSSLSSSSSPSSSPSSSSPSSSSSLSSSSSSPSSSSSSSSSSSSSPSSSSSSS 219

Query: 536 RDTRSPNSTAPSSS 577
             + SP+S++PSSS
Sbjct: 220 PSSSSPSSSSPSSS 233


>ref|XP_001568166.1| proteophosphoglycan ppg4 [Leishmania braziliensis MHOM/BR/75/M2904]
 emb|CAM43270.1| proteophosphoglycan ppg4 [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 4324

 Score = 51.2 bits (121), Expect(2) = 3e-06
 Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
 Frame = +3

Query: 51  CTRVPPLNASSPAHV-------------SSVKASTNPAPRGCDLEASIGGLFGPFLSSPT 191
           CT +PP ++SS +               SS  +S++ AP      A       P  SS  
Sbjct: 630 CTDIPPPSSSSSSSSAPSSSSSAPSSSSSSAPSSSSSAPSSSSSSAPSSSSSAPSSSSSA 689

Query: 192 PTEGAHGPQPTSVELYSKASGPVESAQPTSPACSAPISSLIPPLNPKSTMSGGSSEAPSS 371
           P+  +  P  +S    S +S P  S+   S + SAP SS   P +  S  S  SS APSS
Sbjct: 690 PSSSSSAPSSSSSAPSSSSSAPSSSSSAPSSSSSAPSSSSSAPSSSSSAPSSSSSSAPSS 749



 Score = 27.3 bits (59), Expect(2) = 3e-06
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = +2

Query: 371 SRPCSAPISKETSATLTVEKNSYCNGSSLH*KTPQCPTRSSTSMRTSCYRRFSNARDTRS 550
           S   SAP S  +SA  +   ++  + SS    +   P+ SS++  +S     S++    S
Sbjct: 763 SSSSSAPSSSSSSAPSS-SSSAPSSSSSAPSSSSSAPSSSSSAPSSSSSAPSSSSSSAPS 821

Query: 551 PNSTAPSSS 577
            +S+APSSS
Sbjct: 822 SSSSAPSSS 830



 Score = 47.8 bits (112), Expect(2) = 4e-06
 Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
 Frame = +3

Query: 33   SERPLTCTRVPPLNASS-PAHVSSVKASTNPAPRGCDLEASIGGLFGPFLSSPTPTEGAH 209
            S  P + +  P  ++SS P+  SS  +S++ AP       S      P  SS  P+  + 
Sbjct: 1837 SSAPSSSSSAPSSSSSSAPSSSSSAPSSSSSAPSSSSSAPSSSSSSAPSSSSSAPSSSSS 1896

Query: 210  GPQPTSVELYSKASGPVESAQ--PTSPACSAPISSLIPPLNPKSTMSGGSSEAPSS 371
             P  +S    S +S    S+   P+S + SAP SS   P +  S+    SS APSS
Sbjct: 1897 APSSSSSAPSSSSSSAPSSSSSAPSSSSSSAPSSSSSAPSSSSSSAPSSSSSAPSS 1952



 Score = 30.4 bits (67), Expect(2) = 4e-06
 Identities = 22/69 (31%), Positives = 33/69 (47%)
 Frame = +2

Query: 371  SRPCSAPISKETSATLTVEKNSYCNGSSLH*KTPQCPTRSSTSMRTSCYRRFSNARDTRS 550
            S   SAP S  +SA  +       + SS    +   P+ SS+S  +S     S++    S
Sbjct: 1944 SSSSSAPSSSSSSAPSSSSSAPSSSSSSAPSSSSSAPSSSSSSAPSSSSSAPSSSSSAPS 2003

Query: 551  PNSTAPSSS 577
             +S+APSSS
Sbjct: 2004 SSSSAPSSS 2012


Top