BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00035286
         (427 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020247400.1| pentatricopeptide repeat-containing protein ...   166   4e-55
gb|ONK80456.1| uncharacterized protein A4U43_C01F17900 [Asparagu...   166   4e-55
ref|XP_020097557.1| pentatricopeptide repeat-containing protein ...   127   2e-46
gb|OAY84423.1| Pentatricopeptide repeat-containing protein DOT4,...   127   2e-46
ref|XP_010916743.1| PREDICTED: pentatricopeptide repeat-containi...   127   5e-45
ref|XP_008790066.1| PREDICTED: pentatricopeptide repeat-containi...   127   3e-44
ref|XP_010246449.1| PREDICTED: pentatricopeptide repeat-containi...   127   6e-41
gb|OVA02030.1| Pentatricopeptide repeat [Macleaya cordata]            117   3e-40
ref|XP_018847936.1| PREDICTED: pentatricopeptide repeat-containi...   122   6e-40
ref|XP_024160996.1| pentatricopeptide repeat-containing protein ...   113   5e-39
gb|PKA51663.1| Pentatricopeptide repeat-containing protein [Apos...   111   9e-39
ref|XP_020691186.1| pentatricopeptide repeat-containing protein ...   114   5e-38
ref|XP_011461307.1| PREDICTED: pentatricopeptide repeat-containi...   111   9e-38
ref|XP_011461308.1| PREDICTED: pentatricopeptide repeat-containi...   111   9e-38
ref|XP_020597767.1| pentatricopeptide repeat-containing protein ...   118   2e-37
gb|PPD73552.1| hypothetical protein GOBAR_DD29525 [Gossypium bar...   120   2e-37
ref|XP_012456795.1| PREDICTED: pentatricopeptide repeat-containi...   120   2e-37
ref|NP_001313949.1| pentatricopeptide repeat-containing protein ...   120   2e-37
ref|XP_023884447.1| pentatricopeptide repeat-containing protein ...   115   2e-37
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi...   120   3e-37

>ref|XP_020247400.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic
           [Asparagus officinalis]
          Length = 885

 Score =  166 bits (421), Expect(2) = 4e-55
 Identities = 78/96 (81%), Positives = 86/96 (89%)
 Frame = +3

Query: 3   SVKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEA 182
           SVKVYGNKEITLVN+L+D+YSKCG+L  AK LFERME+RS+VSWTSMISGYTRNGWFEEA
Sbjct: 307 SVKVYGNKEITLVNALIDMYSKCGNLGSAKILFERMEDRSIVSWTSMISGYTRNGWFEEA 366

Query: 183 TALFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
             LFEMME EG  PDLYAITSVLHACAC+GS D G+
Sbjct: 367 MGLFEMMELEGISPDLYAITSVLHACACNGSFDQGK 402



 Score = 76.3 bits (186), Expect(2) = 4e-55
 Identities = 35/46 (76%), Positives = 38/46 (82%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VFD   +KDIISWNTMIGG+SKNCLPNEAL LF +MQ H RPN VT
Sbjct: 439 VFDCANKKDIISWNTMIGGFSKNCLPNEALELFIKMQCHSRPNRVT 484



 Score = 71.6 bits (174), Expect(2) = 1e-15
 Identities = 36/93 (38%), Positives = 59/93 (63%)
 Frame = +3

Query: 30  ITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMES 209
           I++VNSL+ VY+KCGD++ A+ +F+   ++ ++SW +MI G+++N    EA  LF  M+ 
Sbjct: 417 ISVVNSLMHVYAKCGDMEAARMVFDCANKKDIISWNTMIGGFSKNCLPNEALELFIKMQC 476

Query: 210 EGFKPDLYAITSVLHACACSGSLDHGRFLIAQL 308
              +P+   +  VL A A   SLD GR + AQ+
Sbjct: 477 HS-RPNRVTMACVLPAVASLSSLDKGREMHAQI 508



 Score = 38.9 bits (89), Expect(2) = 1e-15
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +2

Query: 287 EVFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ 400
           ++FDR   KD+ISW  MI GY  +    EA++ F EM+
Sbjct: 538 KIFDRIIDKDLISWTVMIAGYGMHGHGREAINAFKEMR 575



 Score = 78.6 bits (192), Expect = 4e-14
 Identities = 34/87 (39%), Positives = 59/87 (67%)
 Frame = +3

Query: 27  EITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMME 206
           ++ + N+LVD+Y+KCG L  A+++F+R+ ++ ++SWT MI+GY  +G   EA   F+ M 
Sbjct: 516 DLHVSNALVDMYAKCGALSFARKIFDRIIDKDLISWTVMIAGYGMHGHGREAINAFKEMR 575

Query: 207 SEGFKPDLYAITSVLHACACSGSLDHG 287
            +G +PD     S+L++C+ SG +D G
Sbjct: 576 CQGIEPDGACFISILYSCSHSGLIDEG 602



 Score = 63.5 bits (153), Expect = 6e-09
 Identities = 32/74 (43%), Positives = 44/74 (59%)
 Frame = +3

Query: 42  NSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFK 221
           N+L+  YSKC  +DCA ++F+ M ++ +VSW S+ISG   NG       LF  M S G  
Sbjct: 219 NALIAFYSKCNRVDCAVQMFDGMLDKDLVSWNSIISGCVSNGLPLNGVELFAEMCSSGVN 278

Query: 222 PDLYAITSVLHACA 263
            DL  + SVL AC+
Sbjct: 279 LDLATLVSVLPACS 292


>gb|ONK80456.1| uncharacterized protein A4U43_C01F17900 [Asparagus officinalis]
          Length = 649

 Score =  166 bits (421), Expect(2) = 4e-55
 Identities = 78/96 (81%), Positives = 86/96 (89%)
 Frame = +3

Query: 3   SVKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEA 182
           SVKVYGNKEITLVN+L+D+YSKCG+L  AK LFERME+RS+VSWTSMISGYTRNGWFEEA
Sbjct: 71  SVKVYGNKEITLVNALIDMYSKCGNLGSAKILFERMEDRSIVSWTSMISGYTRNGWFEEA 130

Query: 183 TALFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
             LFEMME EG  PDLYAITSVLHACAC+GS D G+
Sbjct: 131 MGLFEMMELEGISPDLYAITSVLHACACNGSFDQGK 166



 Score = 76.3 bits (186), Expect(2) = 4e-55
 Identities = 35/46 (76%), Positives = 38/46 (82%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VFD   +KDIISWNTMIGG+SKNCLPNEAL LF +MQ H RPN VT
Sbjct: 203 VFDCANKKDIISWNTMIGGFSKNCLPNEALELFIKMQCHSRPNRVT 248



 Score = 71.6 bits (174), Expect(2) = 1e-15
 Identities = 36/93 (38%), Positives = 59/93 (63%)
 Frame = +3

Query: 30  ITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMES 209
           I++VNSL+ VY+KCGD++ A+ +F+   ++ ++SW +MI G+++N    EA  LF  M+ 
Sbjct: 181 ISVVNSLMHVYAKCGDMEAARMVFDCANKKDIISWNTMIGGFSKNCLPNEALELFIKMQC 240

Query: 210 EGFKPDLYAITSVLHACACSGSLDHGRFLIAQL 308
              +P+   +  VL A A   SLD GR + AQ+
Sbjct: 241 HS-RPNRVTMACVLPAVASLSSLDKGREMHAQI 272



 Score = 38.9 bits (89), Expect(2) = 1e-15
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +2

Query: 287 EVFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ 400
           ++FDR   KD+ISW  MI GY  +    EA++ F EM+
Sbjct: 302 KIFDRIIDKDLISWTVMIAGYGMHGHGREAINAFKEMR 339



 Score = 78.6 bits (192), Expect = 4e-14
 Identities = 34/87 (39%), Positives = 59/87 (67%)
 Frame = +3

Query: 27  EITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMME 206
           ++ + N+LVD+Y+KCG L  A+++F+R+ ++ ++SWT MI+GY  +G   EA   F+ M 
Sbjct: 280 DLHVSNALVDMYAKCGALSFARKIFDRIIDKDLISWTVMIAGYGMHGHGREAINAFKEMR 339

Query: 207 SEGFKPDLYAITSVLHACACSGSLDHG 287
            +G +PD     S+L++C+ SG +D G
Sbjct: 340 CQGIEPDGACFISILYSCSHSGLIDEG 366


>ref|XP_020097557.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic
           [Ananas comosus]
          Length = 877

 Score =  127 bits (319), Expect(2) = 2e-46
 Identities = 56/90 (62%), Positives = 77/90 (85%)
 Frame = +3

Query: 27  EITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMME 206
           E++L NSL+D+YSKC +L  A +LFE+M++RSVVSWT+MI+ YTR+G ++EA +LFE ME
Sbjct: 338 ELSLSNSLIDMYSKCSNLGSAVQLFEKMDQRSVVSWTAMITAYTRDGQYDEAISLFEEME 397

Query: 207 SEGFKPDLYAITSVLHACACSGSLDHGRFL 296
           S G KPD +A+TSVLHAC+C GSL+HG+F+
Sbjct: 398 SRGVKPDQFAVTSVLHACSCKGSLNHGKFV 427



 Score = 86.7 bits (213), Expect(2) = 2e-46
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VFD+T +KD+ISWNT+IGGYSKN LPNEAL LFGEMQSHFRPNSVT
Sbjct: 462 VFDQTVKKDLISWNTLIGGYSKNNLPNEALHLFGEMQSHFRPNSVT 507



 Score = 74.7 bits (182), Expect(2) = 6e-15
 Identities = 35/95 (36%), Positives = 61/95 (64%)
 Frame = +3

Query: 6   VKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEAT 185
           VK    K + + N+L+D+Y+KCGD++ A+ +F++  ++ ++SW ++I GY++N    EA 
Sbjct: 432 VKSGMKKNLFVANALMDMYAKCGDMENARSVFDQTVKKDLISWNTLIGGYSKNNLPNEAL 491

Query: 186 ALFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
            LF  M+S  F+P+   +  +L ACA   SL+ GR
Sbjct: 492 HLFGEMQSH-FRPNSVTMACILPACASLSSLERGR 525



 Score = 33.5 bits (75), Expect(2) = 6e-15
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +2

Query: 293 FDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ 400
           F+R   K++ISW  MI GY  +    +A++LF EM+
Sbjct: 563 FNRMFGKNLISWTMMIAGYGMHGHGQDAIALFKEMR 598



 Score = 77.4 bits (189), Expect = 9e-14
 Identities = 36/84 (42%), Positives = 57/84 (67%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           + N+LVD+Y+KCG L  A+  F RM  ++++SWT MI+GY  +G  ++A ALF+ M  +G
Sbjct: 542 VANALVDMYAKCGALLLARMHFNRMFGKNLISWTMMIAGYGMHGHGQDAIALFKEMRCKG 601

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
             PD  +  ++L+AC+ SG +D G
Sbjct: 602 IVPDDVSFIAILYACSHSGLIDEG 625



 Score = 65.1 bits (157), Expect(2) = 3e-13
 Identities = 37/89 (41%), Positives = 50/89 (56%)
 Frame = +3

Query: 30  ITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMES 209
           IT+ N+L+  Y K   ++ A  LF+ M +R V+SW S+ISG   NG+  +   LF  M  
Sbjct: 238 ITVGNALIAFYCKNNRIESAISLFDEMPQRDVISWNSIISGCASNGFSTKGVELFTSMWF 297

Query: 210 EGFKPDLYAITSVLHACACSGSLDHGRFL 296
           EG   DL  + SVL ACA  G L  GR +
Sbjct: 298 EGVDMDLATLVSVLPACAELGYLLIGRVI 326



 Score = 37.4 bits (85), Expect(2) = 3e-13
 Identities = 14/39 (35%), Positives = 28/39 (71%)
 Frame = +2

Query: 287 EVFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQS 403
           ++F++  ++ ++SW  MI  Y+++   +EA+SLF EM+S
Sbjct: 360 QLFEKMDQRSVVSWTAMITAYTRDGQYDEAISLFEEMES 398


>gb|OAY84423.1| Pentatricopeptide repeat-containing protein DOT4, chloroplastic
           [Ananas comosus]
          Length = 870

 Score =  127 bits (319), Expect(2) = 2e-46
 Identities = 56/90 (62%), Positives = 77/90 (85%)
 Frame = +3

Query: 27  EITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMME 206
           E++L NSL+D+YSKC +L  A +LFE+M++RSVVSWT+MI+ YTR+G ++EA +LFE ME
Sbjct: 331 ELSLSNSLIDMYSKCSNLGSAVQLFEKMDQRSVVSWTAMITAYTRDGQYDEAISLFEEME 390

Query: 207 SEGFKPDLYAITSVLHACACSGSLDHGRFL 296
           S G KPD +A+TSVLHAC+C GSL+HG+F+
Sbjct: 391 SRGVKPDQFAVTSVLHACSCKGSLNHGKFV 420



 Score = 86.7 bits (213), Expect(2) = 2e-46
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VFD+T +KD+ISWNT+IGGYSKN LPNEAL LFGEMQSHFRPNSVT
Sbjct: 455 VFDQTVKKDLISWNTLIGGYSKNNLPNEALHLFGEMQSHFRPNSVT 500



 Score = 74.7 bits (182), Expect(2) = 6e-15
 Identities = 35/95 (36%), Positives = 61/95 (64%)
 Frame = +3

Query: 6   VKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEAT 185
           VK    K + + N+L+D+Y+KCGD++ A+ +F++  ++ ++SW ++I GY++N    EA 
Sbjct: 425 VKSGMKKNLFVANALMDMYAKCGDMENARSVFDQTVKKDLISWNTLIGGYSKNNLPNEAL 484

Query: 186 ALFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
            LF  M+S  F+P+   +  +L ACA   SL+ GR
Sbjct: 485 HLFGEMQSH-FRPNSVTMACILPACASLSSLERGR 518



 Score = 33.5 bits (75), Expect(2) = 6e-15
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +2

Query: 293 FDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ 400
           F+R   K++ISW  MI GY  +    +A++LF EM+
Sbjct: 556 FNRMFGKNLISWTMMIAGYGMHGHGQDAIALFKEMR 591



 Score = 77.4 bits (189), Expect = 9e-14
 Identities = 36/84 (42%), Positives = 57/84 (67%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           + N+LVD+Y+KCG L  A+  F RM  ++++SWT MI+GY  +G  ++A ALF+ M  +G
Sbjct: 535 VANALVDMYAKCGALLLARMHFNRMFGKNLISWTMMIAGYGMHGHGQDAIALFKEMRCKG 594

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
             PD  +  ++L+AC+ SG +D G
Sbjct: 595 IVPDDVSFIAILYACSHSGLIDEG 618



 Score = 65.1 bits (157), Expect(2) = 3e-13
 Identities = 37/89 (41%), Positives = 50/89 (56%)
 Frame = +3

Query: 30  ITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMES 209
           IT+ N+L+  Y K   ++ A  LF+ M +R V+SW S+ISG   NG+  +   LF  M  
Sbjct: 231 ITVGNALIAFYCKNNRIESAISLFDEMPQRDVISWNSIISGCASNGFSTKGVELFTSMWF 290

Query: 210 EGFKPDLYAITSVLHACACSGSLDHGRFL 296
           EG   DL  + SVL ACA  G L  GR +
Sbjct: 291 EGVDMDLATLVSVLPACAELGYLLIGRVI 319



 Score = 37.4 bits (85), Expect(2) = 3e-13
 Identities = 14/39 (35%), Positives = 28/39 (71%)
 Frame = +2

Query: 287 EVFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQS 403
           ++F++  ++ ++SW  MI  Y+++   +EA+SLF EM+S
Sbjct: 353 QLFEKMDQRSVVSWTAMITAYTRDGQYDEAISLFEEMES 391


>ref|XP_010916743.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic [Elaeis guineensis]
          Length = 873

 Score =  127 bits (318), Expect(2) = 5e-45
 Identities = 61/96 (63%), Positives = 75/96 (78%)
 Frame = +3

Query: 3   SVKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEA 182
           S+K   +KE+T+ NSLVD+YSKC  L+ A R+FERM +RSVVSWTSMI  YTR G F+EA
Sbjct: 326 SIKAAYSKEVTVNNSLVDMYSKCCSLEGASRIFERMVQRSVVSWTSMIQAYTRAGLFDEA 385

Query: 183 TALFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
            ALF  MES G +PDL+A+TS LHAC+C GSLD G+
Sbjct: 386 IALFGEMESVGVRPDLFAVTSALHACSCRGSLDQGK 421



 Score = 82.0 bits (201), Expect(2) = 5e-45
 Identities = 36/46 (78%), Positives = 40/46 (86%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           +FD TT K+IISWNT+IGGYSKNC PNEALSLF +MQ H RPNSVT
Sbjct: 458 IFDNTTSKNIISWNTLIGGYSKNCFPNEALSLFSKMQFHMRPNSVT 503



 Score = 68.6 bits (166), Expect(2) = 2e-14
 Identities = 31/89 (34%), Positives = 56/89 (62%)
 Frame = +3

Query: 24  KEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMM 203
           K + + N+L+D+YSKCG ++ A+ +F+    ++++SW ++I GY++N +  EA +LF  M
Sbjct: 434 KNLIVANALMDMYSKCGSMEEARSIFDNTTSKNIISWNTLIGGYSKNCFPNEALSLFSKM 493

Query: 204 ESEGFKPDLYAITSVLHACACSGSLDHGR 290
           +    +P+   +  VL A A   SL+ GR
Sbjct: 494 QFH-MRPNSVTMACVLPAAASLSSLEKGR 521



 Score = 38.1 bits (87), Expect(2) = 2e-14
 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ-SHFRPNSVT 427
           +FDR  +KD+ISW  MI GY  +     A+++F EM+ S   P+ V+
Sbjct: 558 LFDRMFQKDLISWTVMIAGYGMHGHRRNAITVFKEMRGSGVEPDEVS 604



 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 35/84 (41%), Positives = 55/84 (65%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           + N+LVD+Y+KCG L  A+ LF+RM ++ ++SWT MI+GY  +G    A  +F+ M   G
Sbjct: 538 VANALVDMYTKCGALLLARLLFDRMFQKDLISWTVMIAGYGMHGHRRNAITVFKEMRGSG 597

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
            +PD  + T +L+AC+ SG +  G
Sbjct: 598 VEPDEVSFTVILYACSHSGLIHEG 621



 Score = 56.6 bits (135), Expect(2) = 4e-12
 Identities = 30/83 (36%), Positives = 44/83 (53%)
 Frame = +3

Query: 42  NSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFK 221
           N+L+  YSKC  ++ A  +F+ M ++ V+SW S+I+G   N    +   LF  M   G  
Sbjct: 238 NALIAFYSKCNRINSAVDMFDEMPDKDVISWNSLINGCVSNSLPRKGVELFTDMWFSGMD 297

Query: 222 PDLYAITSVLHACACSGSLDHGR 290
            D   + SVL ACA  G L  G+
Sbjct: 298 IDSATLVSVLPACAELGILTLGK 320



 Score = 42.0 bits (97), Expect(2) = 4e-12
 Identities = 16/38 (42%), Positives = 29/38 (76%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQS 403
           +F+R  ++ ++SW +MI  Y++  L +EA++LFGEM+S
Sbjct: 357 IFERMVQRSVVSWTSMIQAYTRAGLFDEAIALFGEMES 394



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERS-VVSWTSMISGYTRNGWFEEATALFEMMESE 212
           L + LV +Y KCGDL   +R+F++   +  +  W  +++ Y + G  EE+  LF+ M+  
Sbjct: 134 LASKLVFMYVKCGDLGEGRRVFDKSAAKDHIFPWNLLLNEYAQVGDLEESIDLFKEMQYS 193

Query: 213 GFKPDLYAITSVLHACACSGSLDHGRFLIAQLGKISSHGIQ*SEGILRIAFQMK 374
             KPD Y  + +L   A  G +  G  +  +L K+   G   + G   IAF  K
Sbjct: 194 SVKPDSYTFSLILKCFATVGGVSEGEQVHGRLIKL-GFGAYNAVGNALIAFYSK 246


>ref|XP_008790066.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic [Phoenix dactylifera]
          Length = 877

 Score =  127 bits (318), Expect(2) = 3e-44
 Identities = 62/96 (64%), Positives = 75/96 (78%)
 Frame = +3

Query: 3   SVKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEA 182
           S+K   +KE+T+ NSLVD+YSKC  L+ A R+FERM +RSVVSWTSMI   TR G F+EA
Sbjct: 330 SIKAAYSKEVTVSNSLVDMYSKCWSLEGASRIFERMVQRSVVSWTSMIQASTRAGLFDEA 389

Query: 183 TALFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
            ALF  MES G +PDL+A+TS LHACACSGSLD G+
Sbjct: 390 IALFGEMESLGVRPDLFAVTSALHACACSGSLDQGK 425



 Score = 79.3 bits (194), Expect(2) = 3e-44
 Identities = 37/46 (80%), Positives = 39/46 (84%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VFD TT K+IISWNT+IGGYSKN  PNEALSLF EMQ H RPNSVT
Sbjct: 462 VFDNTTSKNIISWNTLIGGYSKNHFPNEALSLFSEMQVHMRPNSVT 507



 Score = 67.8 bits (164), Expect(2) = 1e-14
 Identities = 30/89 (33%), Positives = 56/89 (62%)
 Frame = +3

Query: 24  KEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMM 203
           K + + N+L+D+YSKCG ++ A+ +F+    ++++SW ++I GY++N +  EA +LF  M
Sbjct: 438 KNLFVANALMDMYSKCGSMEDARSVFDNTTSKNIISWNTLIGGYSKNHFPNEALSLFSEM 497

Query: 204 ESEGFKPDLYAITSVLHACACSGSLDHGR 290
           +    +P+   +  +L A A   SL+ GR
Sbjct: 498 QVH-MRPNSVTMACILPAAASLSSLEKGR 525



 Score = 39.3 bits (90), Expect(2) = 1e-14
 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ-SHFRPNSVT 427
           +FDR ++KD+ISW  MI GY  +     A+++F EM  S   P+ V+
Sbjct: 562 LFDRMSKKDLISWTVMIAGYGMHGHGKNAIAVFKEMSGSGVEPDEVS 608



 Score = 78.2 bits (191), Expect = 5e-14
 Identities = 36/84 (42%), Positives = 57/84 (67%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           + N+LVD+Y+KCG L  A+ LF+RM ++ ++SWT MI+GY  +G  + A A+F+ M   G
Sbjct: 542 VANALVDMYAKCGALLLARILFDRMSKKDLISWTVMIAGYGMHGHGKNAIAVFKEMSGSG 601

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
            +PD  + T +L+AC+ SG +  G
Sbjct: 602 VEPDEVSFTVILYACSHSGLIYEG 625



 Score = 53.1 bits (126), Expect(2) = 4e-10
 Identities = 30/83 (36%), Positives = 43/83 (51%)
 Frame = +3

Query: 42  NSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFK 221
           N+L+  YSKC  +  A  +F+ M +R V+SW S+I+G   N    +   LF  M   G  
Sbjct: 242 NALIAFYSKCNRITSAIDVFDEMPDRDVISWNSLINGCVFNSLPRKGVDLFTEMWFLGMD 301

Query: 222 PDLYAITSVLHACACSGSLDHGR 290
            D   + +VL ACA  G L  G+
Sbjct: 302 IDSATLVTVLPACAELGILTLGK 324



 Score = 38.5 bits (88), Expect(2) = 4e-10
 Identities = 15/38 (39%), Positives = 28/38 (73%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQS 403
           +F+R  ++ ++SW +MI   ++  L +EA++LFGEM+S
Sbjct: 361 IFERMVQRSVVSWTSMIQASTRAGLFDEAIALFGEMES 398


>ref|XP_010246449.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic [Nelumbo nucifera]
          Length = 873

 Score =  127 bits (319), Expect(2) = 6e-41
 Identities = 55/95 (57%), Positives = 77/95 (81%)
 Frame = +3

Query: 6   VKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEAT 185
           +K + + E+T  N+L+D+YSKCGDLD A R+F +M++RSVVSWTSM++GYTR G ++ A 
Sbjct: 329 IKAHFDSEVTFNNTLLDLYSKCGDLDAATRVFVKMDKRSVVSWTSMMAGYTREGQYDRAI 388

Query: 186 ALFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
            LF+ ME EG KPD++ ITS+LHACAC+GSL+ G+
Sbjct: 389 NLFKEMEEEGIKPDIFTITSILHACACNGSLESGK 423



 Score = 68.2 bits (165), Expect(2) = 6e-41
 Identities = 29/46 (63%), Positives = 37/46 (80%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VFD+   +D +SWNTMIGGYS+NCLPN+AL LF +MQ+  +PN VT
Sbjct: 460 VFDQMPVRDTVSWNTMIGGYSRNCLPNDALGLFIQMQNELKPNVVT 505



 Score = 70.9 bits (172), Expect(2) = 7e-16
 Identities = 33/87 (37%), Positives = 56/87 (64%)
 Frame = +3

Query: 30  ITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMES 209
           + + N+++D+Y+KCG ++ A+ +F++M  R  VSW +MI GY+RN    +A  LF  M++
Sbjct: 438 VFVANAIMDMYAKCGSMEDARSVFDQMPVRDTVSWNTMIGGYSRNCLPNDALGLFIQMQN 497

Query: 210 EGFKPDLYAITSVLHACACSGSLDHGR 290
           E  KP++  +  VL ACA   +L  G+
Sbjct: 498 E-LKPNVVTMACVLPACASLSALKRGQ 523



 Score = 40.4 bits (93), Expect(2) = 7e-16
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEM-QSHFRPNSVT 427
           +FDR   KD+ISW  MI GY  +    E +S+F EM ++   PN ++
Sbjct: 560 LFDRMPTKDLISWTVMISGYGMHGCGREVISVFNEMRRTGVEPNGLS 606



 Score = 79.3 bits (194), Expect = 2e-14
 Identities = 37/87 (42%), Positives = 57/87 (65%)
 Frame = +3

Query: 27  EITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMME 206
           ++ + N+LVD+Y KCG L  A+RLF+RM  + ++SWT MISGY  +G   E  ++F  M 
Sbjct: 537 DLYVANALVDMYVKCGALVHARRLFDRMPTKDLISWTVMISGYGMHGCGREVISVFNEMR 596

Query: 207 SEGFKPDLYAITSVLHACACSGSLDHG 287
             G +P+  +  S+L+AC+ SG +D G
Sbjct: 597 RTGVEPNGLSFISILYACSHSGLIDEG 623



 Score = 72.4 bits (176), Expect(2) = 3e-14
 Identities = 36/79 (45%), Positives = 46/79 (58%)
 Frame = +3

Query: 42  NSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFK 221
           NSL+  YSKC  +  A+ +F+ + +R  +SW SMISGY  NG  EE   LF  M   G  
Sbjct: 240 NSLIAFYSKCKKIQSAREVFDELSDRDTISWNSMISGYVSNGLAEEGLKLFIQMPLSGVD 299

Query: 222 PDLYAITSVLHACACSGSL 278
            DL  + S+L ACA  GSL
Sbjct: 300 LDLTTMISILPACAEIGSL 318



 Score = 33.5 bits (75), Expect(2) = 3e-14
 Identities = 12/37 (32%), Positives = 25/37 (67%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ 400
           VF +  ++ ++SW +M+ GY++    + A++LF EM+
Sbjct: 359 VFVKMDKRSVVSWTSMMAGYTREGQYDRAINLFKEME 395



 Score = 51.2 bits (121), Expect(2) = 7e-11
 Identities = 26/84 (30%), Positives = 45/84 (53%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           L + LV +Y+ CGDL   +R+F+ +++  V  W  +++ Y + G F E+  LF+ M   G
Sbjct: 137 LGSKLVFMYATCGDLGEGRRVFDGIQKEKVFLWNLLMNEYAKIGNFRESIRLFKQMLELG 196

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
              + Y ++ V    A  GS+  G
Sbjct: 197 IDANSYTMSCVFKCFAALGSVVEG 220



 Score = 43.1 bits (100), Expect(2) = 7e-11
 Identities = 20/37 (54%), Positives = 24/37 (64%)
 Frame = +2

Query: 287 EVFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEM 397
           EVFD  + +D ISWN+MI GY  N L  E L LF +M
Sbjct: 257 EVFDELSDRDTISWNSMISGYVSNGLAEEGLKLFIQM 293


>gb|OVA02030.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 783

 Score =  117 bits (294), Expect(2) = 3e-40
 Identities = 53/90 (58%), Positives = 73/90 (81%)
 Frame = +3

Query: 21  NKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEM 200
           + EITL N+L+D+Y+KCGDL  A  +F ++ ++SVVSWTSMI+GYTR G F++A  LF  
Sbjct: 242 SNEITLHNTLLDMYAKCGDLGSAICVFGKIGKKSVVSWTSMITGYTREGKFDKAIGLFSE 301

Query: 201 MESEGFKPDLYAITSVLHACACSGSLDHGR 290
           ME+EG KPDL+ +TS+LHACAC+GSL+ G+
Sbjct: 302 MEAEGIKPDLFTVTSILHACACNGSLESGK 331



 Score = 75.5 bits (184), Expect(2) = 3e-40
 Identities = 34/46 (73%), Positives = 38/46 (82%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VFD+  R+D+ISWNT+IGGYSKNCLPNEA  LF EMQS F PN VT
Sbjct: 368 VFDQMLRRDLISWNTIIGGYSKNCLPNEAFGLFLEMQSGFNPNCVT 413



 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 40/84 (47%), Positives = 57/84 (67%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           + N+LVD+Y+KCG L  A+ LF R+ E+ +VSWT MI+G+  +G   EA A+F  M  EG
Sbjct: 448 ITNALVDMYAKCGALPIARLLFNRLTEKDLVSWTVMITGHGMHGCGREAIAIFNEMRKEG 507

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
            KPD  +  ++L+AC+ SG LD G
Sbjct: 508 IKPDGISFIAILYACSHSGLLDEG 531



 Score = 72.0 bits (175), Expect(2) = 7e-16
 Identities = 34/87 (39%), Positives = 58/87 (66%)
 Frame = +3

Query: 30  ITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMES 209
           I + N+L+D+Y+KCGD+  ++ +F++M  R ++SW ++I GY++N    EA  LF  M+S
Sbjct: 346 IFVANALMDMYAKCGDMTESQLVFDQMLRRDLISWNTIIGGYSKNCLPNEAFGLFLEMQS 405

Query: 210 EGFKPDLYAITSVLHACACSGSLDHGR 290
            GF P+   I+ +L AC+   +L+ GR
Sbjct: 406 -GFNPNCVTISCILPACSSLSALERGR 431



 Score = 39.3 bits (90), Expect(2) = 7e-16
 Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSH-FRPNSVT 427
           +F+R T KD++SW  MI G+  +    EA+++F EM+    +P+ ++
Sbjct: 468 LFNRLTEKDLVSWTVMITGHGMHGCGREAIAIFNEMRKEGIKPDGIS 514



 Score = 67.8 bits (164), Expect(2) = 1e-13
 Identities = 34/88 (38%), Positives = 50/88 (56%)
 Frame = +3

Query: 33  TLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESE 212
           T+ NSL+  YSKC  ++ A ++F+ + +R V+SW S++ GY  NG  ++   +F  M   
Sbjct: 144 TVGNSLIAFYSKCKKIENAHKVFDELSDRDVISWNSIVCGYVSNGLAKQGLEIFSEMMLS 203

Query: 213 GFKPDLYAITSVLHACACSGSLDHGRFL 296
           G   DL  +  VL ACA  G L  GR L
Sbjct: 204 GVNVDLATMVIVLPACAEMGLLLFGRAL 231



 Score = 36.2 bits (82), Expect(2) = 1e-13
 Identities = 14/38 (36%), Positives = 26/38 (68%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQS 403
           VF +  +K ++SW +MI GY++    ++A+ LF EM++
Sbjct: 267 VFGKIGKKSVVSWTSMITGYTREGKFDKAIGLFSEMEA 304


>ref|XP_018847936.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic [Juglans regia]
 ref|XP_018847937.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic [Juglans regia]
          Length = 877

 Score =  122 bits (305), Expect(2) = 6e-40
 Identities = 58/96 (60%), Positives = 72/96 (75%)
 Frame = +3

Query: 3   SVKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEA 182
           ++K   ++EI   N+L+D+YSKCGDLD A R+FE+M +RSVVSWTSMISGY R G  + A
Sbjct: 330 AIKACFDREIKFNNTLLDMYSKCGDLDAAVRVFEKMGKRSVVSWTSMISGYVREGLSDGA 389

Query: 183 TALFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
             LF  ME  G  PDL+ ITS+LHACAC+GSLD GR
Sbjct: 390 IRLFYKMERNGVSPDLFTITSILHACACNGSLDSGR 425



 Score = 70.1 bits (170), Expect(2) = 6e-40
 Identities = 32/46 (69%), Positives = 38/46 (82%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VF +   +DIISWNTMIGGYSKNCLPNEAL+LF EMQ   +P+S+T
Sbjct: 462 VFTQMPVRDIISWNTMIGGYSKNCLPNEALNLFVEMQQVVKPDSIT 507



 Score = 72.0 bits (175), Expect(2) = 2e-14
 Identities = 39/90 (43%), Positives = 56/90 (62%)
 Frame = +3

Query: 33  TLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESE 212
           ++VNSL+  Y K G ++ AK+LF+ + +R V+SW SMISGY  NG+ ++   +F+ M   
Sbjct: 239 SVVNSLIAFYFKGGRVESAKKLFDELSDRDVISWNSMISGYASNGFAKKGLEIFKEMLCL 298

Query: 213 GFKPDLYAITSVLHACACSGSLDHGRFLIA 302
           G   DL  + +VL ACA   SL  GR L A
Sbjct: 299 GVGVDLATMVNVLVACASISSLWLGRPLHA 328



 Score = 34.7 bits (78), Expect(2) = 2e-14
 Identities = 13/37 (35%), Positives = 25/37 (67%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ 400
           VF++  ++ ++SW +MI GY +  L + A+ LF +M+
Sbjct: 361 VFEKMGKRSVVSWTSMISGYVREGLSDGAIRLFYKME 397



 Score = 77.4 bits (189), Expect = 9e-14
 Identities = 37/84 (44%), Positives = 55/84 (65%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           +VN+LVD+Y KCG L  A+ LF+ +  + ++SWT MI+GY  +G+  +A A    M + G
Sbjct: 542 VVNALVDMYVKCGVLVFAQLLFDMIPSKDLISWTVMIAGYGMHGFGSKAVATINEMRNAG 601

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
            KPD  +  S+L+AC+ SG LD G
Sbjct: 602 VKPDEVSFISILYACSHSGLLDEG 625



 Score = 68.9 bits (167), Expect(2) = 2e-13
 Identities = 32/90 (35%), Positives = 57/90 (63%)
 Frame = +3

Query: 21  NKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEM 200
           +  +++ N+L+D+Y+KCG ++ A+ +F +M  R ++SW +MI GY++N    EA  LF  
Sbjct: 437 DSSLSVSNALMDMYAKCGSIEDARSVFTQMPVRDIISWNTMIGGYSKNCLPNEALNLFVE 496

Query: 201 MESEGFKPDLYAITSVLHACACSGSLDHGR 290
           M+ +  KPD   +  +L ACA   +L+ G+
Sbjct: 497 MQ-QVVKPDSITMACILPACASLAALERGQ 525



 Score = 34.3 bits (77), Expect(2) = 2e-13
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQS 403
           +FD    KD+ISW  MI GY  +   ++A++   EM++
Sbjct: 562 LFDMIPSKDLISWTVMIAGYGMHGFGSKAVATINEMRN 599


>ref|XP_024160996.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic
           [Rosa chinensis]
 gb|PRQ29211.1| putative tetratricopeptide-like helical domain, DYW
           domain-containing protein [Rosa chinensis]
          Length = 879

 Score =  113 bits (282), Expect(2) = 5e-39
 Identities = 53/96 (55%), Positives = 71/96 (73%)
 Frame = +3

Query: 3   SVKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEA 182
           ++K   + ++ L N+++D+YSKCGDL  A R+FE+M +RSVVSWTSMI+GY R G  ++A
Sbjct: 332 AIKAGFDMDVMLCNNVLDMYSKCGDLSDAVRVFEKMGQRSVVSWTSMIAGYVREGLSDKA 391

Query: 183 TALFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
             LF  ME  G  PD Y ITS+LHACACSGSL+ G+
Sbjct: 392 IELFCEMEENGVSPDGYTITSILHACACSGSLEKGK 427



 Score = 75.9 bits (185), Expect(2) = 5e-39
 Identities = 33/46 (71%), Positives = 37/46 (80%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VF    RKDI+SWNTMIGGYSKNCLPNE L LF EMQ  F+P+S+T
Sbjct: 464 VFSHMLRKDIVSWNTMIGGYSKNCLPNETLELFSEMQQKFKPDSMT 509



 Score = 75.5 bits (184), Expect(2) = 4e-16
 Identities = 37/90 (41%), Positives = 55/90 (61%)
 Frame = +3

Query: 21  NKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEM 200
           +  + + NSL+D+Y+KCG ++ A  +F  M  + +VSW +MI GY++N    E   LF  
Sbjct: 439 DSSLFVCNSLMDMYAKCGSMEDADSVFSHMLRKDIVSWNTMIGGYSKNCLPNETLELFSE 498

Query: 201 MESEGFKPDLYAITSVLHACACSGSLDHGR 290
           M+ + FKPD   I SVL ACA   +LD G+
Sbjct: 499 MQQK-FKPDSMTIASVLPACASLAALDRGQ 527



 Score = 36.6 bits (83), Expect(2) = 4e-16
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEM-QSHFRPNSVT 427
           +FD    KD+ISW  +I GY  +    EA++ F EM ++   P+S++
Sbjct: 564 LFDMIPVKDLISWTVIIAGYGMHGFGREAIAAFNEMKKAGIEPDSIS 610



 Score = 68.6 bits (166), Expect(2) = 2e-14
 Identities = 36/90 (40%), Positives = 52/90 (57%)
 Frame = +3

Query: 33  TLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESE 212
           T+VNSL+  Y K   ++ A+++F+ + +R V+SW SMIS Y  NG  E+   +F  M   
Sbjct: 241 TVVNSLMAFYFKNRRVESARKVFDELRDRDVISWNSMISAYVSNGAAEKGVEVFRQMFCS 300

Query: 213 GFKPDLYAITSVLHACACSGSLDHGRFLIA 302
           G   DL  I +VL AC+  G L  GR + A
Sbjct: 301 GIDVDLATIINVLMACSDCGDLALGRVVHA 330



 Score = 37.7 bits (86), Expect(2) = 2e-14
 Identities = 14/39 (35%), Positives = 27/39 (69%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSH 406
           VF++  ++ ++SW +MI GY +  L ++A+ LF EM+ +
Sbjct: 363 VFEKMGQRSVVSWTSMIAGYVREGLSDKAIELFCEMEEN 401



 Score = 72.8 bits (177), Expect = 4e-12
 Identities = 34/84 (40%), Positives = 54/84 (64%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           + N+LVD+Y KCG L  A+ LF+ +  + ++SWT +I+GY  +G+  EA A F  M+  G
Sbjct: 544 VANALVDMYVKCGVLVLAQILFDMIPVKDLISWTVIIAGYGMHGFGREAIAAFNEMKKAG 603

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
            +PD  +  S+L+AC+ SG +  G
Sbjct: 604 IEPDSISFISILYACSHSGLVQEG 627


>gb|PKA51663.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 880

 Score =  111 bits (278), Expect(2) = 9e-39
 Identities = 52/98 (53%), Positives = 77/98 (78%)
 Frame = +3

Query: 3   SVKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEA 182
           S+K    KE++L N+LVD+YSKC ++D A ++F++M E+++VSWT+M SG+T NG +++A
Sbjct: 332 SIKSGFVKEVSLNNTLVDMYSKCRNVDNATQVFDKMGEKNIVSWTTMTSGFTINGAYQKA 391

Query: 183 TALFEMMESEGFKPDLYAITSVLHACACSGSLDHGRFL 296
            ALFE ME+EG + DL+ ITS LH CACSGSL+ G+ +
Sbjct: 392 IALFEEMEAEGVELDLHFITSALHCCACSGSLNQGKHI 429



 Score = 76.6 bits (187), Expect(2) = 9e-39
 Identities = 33/46 (71%), Positives = 41/46 (89%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VFD T+ KDIISWNT+IGGYSKN LPNEAL+LF +MQ H++PN++T
Sbjct: 464 VFDCTSIKDIISWNTLIGGYSKNSLPNEALALFAKMQQHYKPNTIT 509



 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
 Frame = +3

Query: 18  GNKEITLV-NSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALF 194
           G +E + V N+LVD+Y+KCG L  A+RLFER+  + + SWT MI+GY  +G   EA A F
Sbjct: 537 GYQECSFVANALVDMYAKCGALLLARRLFERIAVKDIFSWTVMIAGYGMHGHGREALATF 596

Query: 195 EMMESEGFKPDLYAITSVLHACACSGSLDHG 287
           + M  +G KPD  +  ++L++C+ SG +D G
Sbjct: 597 KEMRGKGIKPDGVSFIALLYSCSHSGLVDEG 627



 Score = 68.9 bits (167), Expect(2) = 7e-15
 Identities = 31/91 (34%), Positives = 54/91 (59%)
 Frame = +3

Query: 24  KEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMM 203
           + + + N+++  YSKC  ++ A+++F+ M  + +V+W SMI GY  NG+ + A   F  M
Sbjct: 238 RSVAVGNAIIAFYSKCSSMNVARKVFDEMPLKDIVTWNSMIHGYVSNGFAKAACEFFTEM 297

Query: 204 ESEGFKPDLYAITSVLHACACSGSLDHGRFL 296
            + G + DL  + SV+ AC+  G L  G+ L
Sbjct: 298 WASGMEIDLATMVSVIPACSKMGFLAEGQAL 328



 Score = 38.9 bits (89), Expect(2) = 7e-15
 Identities = 16/39 (41%), Positives = 27/39 (69%)
 Frame = +2

Query: 287 EVFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQS 403
           +VFD+   K+I+SW TM  G++ N    +A++LF EM++
Sbjct: 362 QVFDKMGEKNIVSWTTMTSGFTINGAYQKAIALFEEMEA 400



 Score = 66.2 bits (160), Expect(2) = 2e-13
 Identities = 32/93 (34%), Positives = 57/93 (61%)
 Frame = +3

Query: 30  ITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMES 209
           + + NSL+D+Y+KCG++  A+ +F+    + ++SW ++I GY++N    EA ALF  M+ 
Sbjct: 442 VFVANSLMDMYAKCGNMVDARLVFDCTSIKDIISWNTLIGGYSKNSLPNEALALFAKMQ- 500

Query: 210 EGFKPDLYAITSVLHACACSGSLDHGRFLIAQL 308
           + +KP+   +   L A A   +LD GR + A +
Sbjct: 501 QHYKPNTITMACTLRASASLSALDKGREIHAHV 533



 Score = 37.0 bits (84), Expect(2) = 2e-13
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSH-FRPNSVT 427
           +F+R   KDI SW  MI GY  +    EAL+ F EM+    +P+ V+
Sbjct: 564 LFERIAVKDIFSWTVMIAGYGMHGHGREALATFKEMRGKGIKPDGVS 610


>ref|XP_020691186.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic
           [Dendrobium catenatum]
 gb|PKU81470.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 876

 Score =  114 bits (286), Expect(2) = 5e-38
 Identities = 55/98 (56%), Positives = 73/98 (74%)
 Frame = +3

Query: 3   SVKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEA 182
           S+K    KE+ L NSL+D+YSKC  +  A ++FE+M  R++VSWTSMISGY  N  +EEA
Sbjct: 332 SIKAGFVKEVNLNNSLLDMYSKCLAVGNAVQIFEKMSGRTIVSWTSMISGYAINAQYEEA 391

Query: 183 TALFEMMESEGFKPDLYAITSVLHACACSGSLDHGRFL 296
            +LFE ME+E  +PDL+ IT  LHACACSGSL+HG+ +
Sbjct: 392 ISLFEEMEAENMEPDLHFITCALHACACSGSLNHGKHI 429



 Score = 70.9 bits (172), Expect(2) = 5e-38
 Identities = 32/47 (68%), Positives = 37/47 (78%)
 Frame = +2

Query: 287 EVFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           +VFD T  KD+ISWNT+IGGY+KN LPNEAL LF +MQ H  PNS T
Sbjct: 463 DVFDHTADKDMISWNTLIGGYAKNSLPNEALHLFVKMQLHMLPNSTT 509



 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 39/84 (46%), Positives = 59/84 (70%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           ++N+LVD+YSKCG L  A++LF+ M+ + +VSWT +ISGY  +G   EA A+F+ M   G
Sbjct: 544 VMNALVDMYSKCGALVLARQLFDLMDFKDIVSWTVVISGYGMHGHGREALAIFKQMRRNG 603

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
            KPD  +  ++L+AC+ SG +D G
Sbjct: 604 IKPDGVSFVAILYACSHSGLIDEG 627



 Score = 58.9 bits (141), Expect(2) = 2e-12
 Identities = 32/85 (37%), Positives = 46/85 (54%)
 Frame = +3

Query: 42  NSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFK 221
           N+L+ +YSKC  ++ A  +F++M  + ++SW S+I G    G F +   LF  M   G  
Sbjct: 244 NALIAMYSKCYCINTAINVFDKMPVKDIISWNSIIHGCVSRGIFNKGLELFSEMLFSGMD 303

Query: 222 PDLYAITSVLHACACSGSLDHGRFL 296
            DL  + SVL A A  G L  GR L
Sbjct: 304 IDLATLVSVLPAFAEIGDLAQGRAL 328



 Score = 40.8 bits (94), Expect(2) = 2e-12
 Identities = 16/39 (41%), Positives = 28/39 (71%)
 Frame = +2

Query: 287 EVFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQS 403
           ++F++ + + I+SW +MI GY+ N    EA+SLF EM++
Sbjct: 362 QIFEKMSGRTIVSWTSMISGYAINAQYEEAISLFEEMEA 400



 Score = 60.5 bits (145), Expect = 8e-08
 Identities = 32/105 (30%), Positives = 60/105 (57%)
 Frame = +3

Query: 21  NKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEM 200
           +  I + N+L+D+Y+KCG+++ A+ +F+   ++ ++SW ++I GY +N    EA  LF  
Sbjct: 439 DSHIFVANALMDMYAKCGNMENARDVFDHTADKDMISWNTLIGGYAKNSLPNEALHLFVK 498

Query: 201 MESEGFKPDLYAITSVLHACACSGSLDHGRFLIAQLGKISSHGIQ 335
           M+     P+   +  +L A A    L+ GR + A + ++   GIQ
Sbjct: 499 MQLH-MLPNSTTMACILRASASLSLLEKGREMHAYIIRV---GIQ 539


>ref|XP_011461307.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic isoform X1 [Fragaria vesca subsp. vesca]
          Length = 870

 Score =  111 bits (277), Expect(2) = 9e-38
 Identities = 51/88 (57%), Positives = 68/88 (77%)
 Frame = +3

Query: 27  EITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMME 206
           ++ L NS++D+YSKCGDL  A R+FE+M  RSV+SWTSMI+GY R    ++A  LF  ME
Sbjct: 331 DVALCNSVLDMYSKCGDLSDALRVFEKMGRRSVLSWTSMIAGYVREALSDKAIELFCEME 390

Query: 207 SEGFKPDLYAITSVLHACACSGSLDHGR 290
           ++G  PD+Y ITS+LHACACSGSL+ G+
Sbjct: 391 TDGVIPDVYTITSILHACACSGSLEKGK 418



 Score = 73.6 bits (179), Expect(2) = 9e-38
 Identities = 32/46 (69%), Positives = 37/46 (80%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VF     KDI+SWNTMIGGYSKNCLPNEAL LF +MQ  F+P+S+T
Sbjct: 455 VFSHMPMKDIVSWNTMIGGYSKNCLPNEALELFSDMQRKFKPDSMT 500



 Score = 75.5 bits (184), Expect(2) = 7e-15
 Identities = 37/90 (41%), Positives = 56/90 (62%)
 Frame = +3

Query: 21  NKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEM 200
           +  + + NSL+D+Y+KCG ++ A  +F  M  + +VSW +MI GY++N    EA  LF  
Sbjct: 430 DSSLFVCNSLMDMYAKCGSMEDADSVFSHMPMKDIVSWNTMIGGYSKNCLPNEALELFSD 489

Query: 201 MESEGFKPDLYAITSVLHACACSGSLDHGR 290
           M+ + FKPD   + SVL ACA   +LD G+
Sbjct: 490 MQRK-FKPDSMTLASVLPACASLAALDRGQ 518



 Score = 67.8 bits (164), Expect(2) = 7e-15
 Identities = 37/94 (39%), Positives = 54/94 (57%)
 Frame = +3

Query: 9   KVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATA 188
           K+    +  +VNSL+  Y K G ++ A+++F+ + ER VVSW SMIS Y  NG  E+   
Sbjct: 224 KLRFGSDSNVVNSLMAFYFKNGRVESARKVFDALRERDVVSWNSMISAYVSNGAPEKGIE 283

Query: 189 LFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
           +F  M   G   DL  I +VL AC+  G++  GR
Sbjct: 284 IFREMVWSGIDVDLATIINVLMACSDCGNVVLGR 317



 Score = 40.0 bits (92), Expect(2) = 7e-15
 Identities = 15/38 (39%), Positives = 27/38 (71%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQS 403
           VF++  R+ ++SW +MI GY +  L ++A+ LF EM++
Sbjct: 354 VFEKMGRRSVLSWTSMIAGYVREALSDKAIELFCEMET 391



 Score = 32.3 bits (72), Expect(2) = 7e-15
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEM-QSHFRPNSVT 427
           +F+    KD+IS+  +I GY  +    EA++ F EM ++   P+S++
Sbjct: 555 LFEMIPVKDLISYTVIIAGYGMHGFGKEAIAAFNEMTKAEIEPDSIS 601



 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 33/84 (39%), Positives = 53/84 (63%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           + N+LVD+Y KCG L  A+ LFE +  + ++S+T +I+GY  +G+ +EA A F  M    
Sbjct: 535 VANALVDMYVKCGVLILARVLFEMIPVKDLISYTVIIAGYGMHGFGKEAIAAFNEMTKAE 594

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
            +PD  +  S+L+AC+ SG +  G
Sbjct: 595 IEPDSISFISILYACSHSGLVQEG 618


>ref|XP_011461308.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic isoform X2 [Fragaria vesca subsp. vesca]
          Length = 849

 Score =  111 bits (277), Expect(2) = 9e-38
 Identities = 51/88 (57%), Positives = 68/88 (77%)
 Frame = +3

Query: 27  EITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMME 206
           ++ L NS++D+YSKCGDL  A R+FE+M  RSV+SWTSMI+GY R    ++A  LF  ME
Sbjct: 331 DVALCNSVLDMYSKCGDLSDALRVFEKMGRRSVLSWTSMIAGYVREALSDKAIELFCEME 390

Query: 207 SEGFKPDLYAITSVLHACACSGSLDHGR 290
           ++G  PD+Y ITS+LHACACSGSL+ G+
Sbjct: 391 TDGVIPDVYTITSILHACACSGSLEKGK 418



 Score = 73.6 bits (179), Expect(2) = 9e-38
 Identities = 32/46 (69%), Positives = 37/46 (80%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VF     KDI+SWNTMIGGYSKNCLPNEAL LF +MQ  F+P+S+T
Sbjct: 455 VFSHMPMKDIVSWNTMIGGYSKNCLPNEALELFSDMQRKFKPDSMT 500



 Score = 75.5 bits (184), Expect(2) = 7e-15
 Identities = 37/90 (41%), Positives = 56/90 (62%)
 Frame = +3

Query: 21  NKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEM 200
           +  + + NSL+D+Y+KCG ++ A  +F  M  + +VSW +MI GY++N    EA  LF  
Sbjct: 430 DSSLFVCNSLMDMYAKCGSMEDADSVFSHMPMKDIVSWNTMIGGYSKNCLPNEALELFSD 489

Query: 201 MESEGFKPDLYAITSVLHACACSGSLDHGR 290
           M+ + FKPD   + SVL ACA   +LD G+
Sbjct: 490 MQRK-FKPDSMTLASVLPACASLAALDRGQ 518



 Score = 67.8 bits (164), Expect(2) = 7e-15
 Identities = 37/94 (39%), Positives = 54/94 (57%)
 Frame = +3

Query: 9   KVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATA 188
           K+    +  +VNSL+  Y K G ++ A+++F+ + ER VVSW SMIS Y  NG  E+   
Sbjct: 224 KLRFGSDSNVVNSLMAFYFKNGRVESARKVFDALRERDVVSWNSMISAYVSNGAPEKGIE 283

Query: 189 LFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
           +F  M   G   DL  I +VL AC+  G++  GR
Sbjct: 284 IFREMVWSGIDVDLATIINVLMACSDCGNVVLGR 317



 Score = 40.0 bits (92), Expect(2) = 7e-15
 Identities = 15/38 (39%), Positives = 27/38 (71%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQS 403
           VF++  R+ ++SW +MI GY +  L ++A+ LF EM++
Sbjct: 354 VFEKMGRRSVLSWTSMIAGYVREALSDKAIELFCEMET 391



 Score = 32.3 bits (72), Expect(2) = 7e-15
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEM-QSHFRPNSVT 427
           +F+    KD+IS+  +I GY  +    EA++ F EM ++   P+S++
Sbjct: 555 LFEMIPVKDLISYTVIIAGYGMHGFGKEAIAAFNEMTKAEIEPDSIS 601



 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 33/84 (39%), Positives = 53/84 (63%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           + N+LVD+Y KCG L  A+ LFE +  + ++S+T +I+GY  +G+ +EA A F  M    
Sbjct: 535 VANALVDMYVKCGVLILARVLFEMIPVKDLISYTVIIAGYGMHGFGKEAIAAFNEMTKAE 594

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
            +PD  +  S+L+AC+ SG +  G
Sbjct: 595 IEPDSISFISILYACSHSGLVQEG 618


>ref|XP_020597767.1| pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Phalaenopsis equestris]
          Length = 879

 Score =  118 bits (296), Expect(2) = 2e-37
 Identities = 56/98 (57%), Positives = 76/98 (77%)
 Frame = +3

Query: 3   SVKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEA 182
           S+K    +E+TL NSL+D+YSKC  ++ A ++FE+M ER++VSWTSMISGYT NG +EEA
Sbjct: 332 SIKAGFVQEVTLSNSLLDMYSKCLAVENAVQIFEKMSERTIVSWTSMISGYTLNGHYEEA 391

Query: 183 TALFEMMESEGFKPDLYAITSVLHACACSGSLDHGRFL 296
             LF+ ME E  +PDL+ IT+ LHACACSGSL+ G+ +
Sbjct: 392 IFLFKKMEDENLEPDLHFITTALHACACSGSLNKGKHI 429



 Score = 65.5 bits (158), Expect(2) = 2e-37
 Identities = 31/46 (67%), Positives = 34/46 (73%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VFD T +KD ISWNT+IGGYSKN LPNEAL LF  M    +PNS T
Sbjct: 464 VFDHTPKKDTISWNTLIGGYSKNSLPNEALHLFVTMLLCMKPNSTT 509



 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
 Frame = +3

Query: 18  GNKEITLV-NSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALF 194
           G +E + V N+LVD+Y KCG L  A++LF+ M+ R +++WT MI+GY  +G   EA  +F
Sbjct: 537 GMQECSFVANALVDMYVKCGALLLARQLFDLMQFRDLITWTVMIAGYGMHGHGREALQIF 596

Query: 195 EMMESEGFKPDLYAITSVLHACACSGSLDHG 287
           + M  +  KPD  +  ++L+AC+ SG +D G
Sbjct: 597 KQMRLKRIKPDGVSFIAILYACSHSGLIDEG 627



 Score = 62.0 bits (149), Expect(2) = 1e-11
 Identities = 31/91 (34%), Positives = 54/91 (59%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           + N+L+D+Y+KCGD++ A+ +F+   ++  +SW ++I GY++N    EA  LF  M    
Sbjct: 444 VANALMDMYAKCGDMENARIVFDHTPKKDTISWNTLIGGYSKNSLPNEALHLFVTM-LLC 502

Query: 216 FKPDLYAITSVLHACACSGSLDHGRFLIAQL 308
            KP+   +  +L A A   SL+ GR + A +
Sbjct: 503 MKPNSTTMACILRASASLSSLEKGREMHAHI 533



 Score = 34.7 bits (78), Expect(2) = 1e-11
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +2

Query: 287 EVFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ-SHFRPNSVT 427
           ++FD    +D+I+W  MI GY  +    EAL +F +M+    +P+ V+
Sbjct: 563 QLFDLMQFRDLITWTVMIAGYGMHGHGREALQIFKQMRLKRIKPDGVS 610



 Score = 57.4 bits (137), Expect(2) = 1e-10
 Identities = 29/85 (34%), Positives = 45/85 (52%)
 Frame = +3

Query: 42  NSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFK 221
           N+L+ +YSKC  +  A ++F+ M  + ++SW S+I G   +   ++   LF  M   G  
Sbjct: 244 NALISLYSKCSSISVAIKVFDVMSVKDIISWNSIIHGCVSSDILDKGVRLFREMLFSGMD 303

Query: 222 PDLYAITSVLHACACSGSLDHGRFL 296
            DL  + SVL A    G+L  GR L
Sbjct: 304 IDLATLVSVLPAFPKMGALSQGRAL 328



 Score = 36.2 bits (82), Expect(2) = 1e-10
 Identities = 14/38 (36%), Positives = 26/38 (68%)
 Frame = +2

Query: 287 EVFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ 400
           ++F++ + + I+SW +MI GY+ N    EA+ LF +M+
Sbjct: 362 QIFEKMSERTIVSWTSMISGYTLNGHYEEAIFLFKKME 399


>gb|PPD73552.1| hypothetical protein GOBAR_DD29525 [Gossypium barbadense]
          Length = 875

 Score =  120 bits (300), Expect(2) = 2e-37
 Identities = 57/96 (59%), Positives = 74/96 (77%)
 Frame = +3

Query: 3   SVKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEA 182
           ++K    + I   N+L+D+YSKCGDLD A R+FE+M ER+VVSWTSMI+GYTR+GW + A
Sbjct: 327 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGA 386

Query: 183 TALFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
             L + ME EG K D+ AITS+LHACA SGSLD+G+
Sbjct: 387 IILLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 422



 Score = 63.9 bits (154), Expect(2) = 2e-37
 Identities = 29/46 (63%), Positives = 32/46 (69%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VF     KDIISWNTM+GGYSKNCLPNEAL  F  M    +P+S T
Sbjct: 459 VFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKELKPDSRT 504



 Score = 78.6 bits (192), Expect = 4e-14
 Identities = 37/84 (44%), Positives = 54/84 (64%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           + N+LVD+Y KCG L  A+ LF+ +  + +VSWT MI+GY  +G+  EA A F  M   G
Sbjct: 539 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 598

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
            +PD  +  S+L+AC+ SG L+ G
Sbjct: 599 IEPDEVSFISILYACSHSGLLEQG 622



 Score = 64.7 bits (156), Expect(2) = 1e-13
 Identities = 30/83 (36%), Positives = 49/83 (59%)
 Frame = +3

Query: 42  NSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFK 221
           N+L+D+Y+KCG ++ A  +F  M  + ++SW +M+ GY++N    EA   F  M  E  K
Sbjct: 441 NALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKE-LK 499

Query: 222 PDLYAITSVLHACACSGSLDHGR 290
           PD   +  +L ACA   +L+ G+
Sbjct: 500 PDSRTMACILPACASLSALERGK 522



 Score = 39.3 bits (90), Expect(2) = 1e-13
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ 400
           +FD    KD++SW  MI GY  +   NEA++ F EM+
Sbjct: 559 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMR 595



 Score = 67.8 bits (164), Expect(2) = 2e-12
 Identities = 36/86 (41%), Positives = 50/86 (58%)
 Frame = +3

Query: 33  TLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESE 212
           ++VNSL+  Y K    + A  LF+++ +R V+SW SMISGY  NG  E    +++ M   
Sbjct: 236 SVVNSLIAFYFKGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYL 295

Query: 213 GFKPDLYAITSVLHACACSGSLDHGR 290
           G   DL  I SVL  CA SG+L  G+
Sbjct: 296 GIDVDLATIISVLVGCANSGTLSLGK 321



 Score = 31.6 bits (70), Expect(2) = 2e-12
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ 400
           VF++   ++++SW +MI GY+++   + A+ L  +M+
Sbjct: 358 VFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQME 394



 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 33/90 (36%), Positives = 52/90 (57%)
 Frame = +3

Query: 48  LVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFKPD 227
           LV  Y+ CGDL   +R+F+ ME+++V  W  M+S Y + G F+E+  LF++M  +G + +
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVN 199

Query: 228 LYAITSVLHACACSGSLDHGRFLIAQLGKI 317
            Y  + VL   A  GSL  G  +   L K+
Sbjct: 200 SYTFSCVLKCFAALGSLKEGECVHGYLLKL 229


>ref|XP_012456795.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic [Gossypium raimondii]
 gb|KJB69698.1| hypothetical protein B456_011G038100 [Gossypium raimondii]
          Length = 875

 Score =  120 bits (300), Expect(2) = 2e-37
 Identities = 57/96 (59%), Positives = 74/96 (77%)
 Frame = +3

Query: 3   SVKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEA 182
           ++K    + I   N+L+D+YSKCGDLD A R+FE+M ER+VVSWTSMI+GYTR+GW + A
Sbjct: 327 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGA 386

Query: 183 TALFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
             L + ME EG K D+ AITS+LHACA SGSLD+G+
Sbjct: 387 IILLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 422



 Score = 63.9 bits (154), Expect(2) = 2e-37
 Identities = 29/46 (63%), Positives = 32/46 (69%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VF     KDIISWNTM+GGYSKNCLPNEAL  F  M    +P+S T
Sbjct: 459 VFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKELKPDSRT 504



 Score = 78.6 bits (192), Expect = 4e-14
 Identities = 37/84 (44%), Positives = 54/84 (64%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           + N+LVD+Y KCG L  A+ LF+ +  + +VSWT MI+GY  +G+  EA A F  M   G
Sbjct: 539 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 598

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
            +PD  +  S+L+AC+ SG L+ G
Sbjct: 599 IEPDEVSFISILYACSHSGLLEQG 622



 Score = 64.7 bits (156), Expect(2) = 1e-13
 Identities = 30/83 (36%), Positives = 49/83 (59%)
 Frame = +3

Query: 42  NSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFK 221
           N+L+D+Y+KCG ++ A  +F  M  + ++SW +M+ GY++N    EA   F  M  E  K
Sbjct: 441 NALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKE-LK 499

Query: 222 PDLYAITSVLHACACSGSLDHGR 290
           PD   +  +L ACA   +L+ G+
Sbjct: 500 PDSRTMACILPACASLSALERGK 522



 Score = 39.3 bits (90), Expect(2) = 1e-13
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ 400
           +FD    KD++SW  MI GY  +   NEA++ F EM+
Sbjct: 559 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMR 595



 Score = 68.2 bits (165), Expect(2) = 2e-12
 Identities = 36/86 (41%), Positives = 50/86 (58%)
 Frame = +3

Query: 33  TLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESE 212
           ++VNSL+  Y K    + A  LF+++ +R V+SW SMISGY  NG  E    +++ M   
Sbjct: 236 SVVNSLIAFYFKGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYL 295

Query: 213 GFKPDLYAITSVLHACACSGSLDHGR 290
           G   DL  I SVL  CA SG+L  G+
Sbjct: 296 GIDVDLATIISVLVGCAKSGTLSLGK 321



 Score = 31.6 bits (70), Expect(2) = 2e-12
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ 400
           VF++   ++++SW +MI GY+++   + A+ L  +M+
Sbjct: 358 VFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQME 394



 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 33/90 (36%), Positives = 52/90 (57%)
 Frame = +3

Query: 48  LVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFKPD 227
           LV  Y+ CGDL   +R+F+ ME+++V  W  M+S Y + G F+E+  LF++M  +G + +
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVN 199

Query: 228 LYAITSVLHACACSGSLDHGRFLIAQLGKI 317
            Y  + VL   A  GSL  G  +   L K+
Sbjct: 200 SYTFSCVLKCFAALGSLKEGECVHGYLLKL 229


>ref|NP_001313949.1| pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Gossypium hirsutum]
 gb|AHB18405.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 875

 Score =  120 bits (300), Expect(2) = 2e-37
 Identities = 57/96 (59%), Positives = 74/96 (77%)
 Frame = +3

Query: 3   SVKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEA 182
           ++K    + I   N+L+D+YSKCGDLD A R+FE+M ER+VVSWTSMI+GYTR+GW + A
Sbjct: 327 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGA 386

Query: 183 TALFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
             L + ME EG K D+ AITS+LHACA SGSLD+G+
Sbjct: 387 IILLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 422



 Score = 63.9 bits (154), Expect(2) = 2e-37
 Identities = 29/46 (63%), Positives = 32/46 (69%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VF     KDIISWNTM+GGYSKNCLPNEAL  F  M    +P+S T
Sbjct: 459 VFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKELKPDSRT 504



 Score = 78.6 bits (192), Expect = 4e-14
 Identities = 37/84 (44%), Positives = 54/84 (64%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           + N+LVD+Y KCG L  A+ LF+ +  + +VSWT MI+GY  +G+  EA A F  M   G
Sbjct: 539 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 598

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
            +PD  +  S+L+AC+ SG L+ G
Sbjct: 599 IEPDEVSFISILYACSHSGLLEQG 622



 Score = 64.7 bits (156), Expect(2) = 1e-13
 Identities = 30/83 (36%), Positives = 49/83 (59%)
 Frame = +3

Query: 42  NSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFK 221
           N+L+D+Y+KCG ++ A  +F  M  + ++SW +M+ GY++N    EA   F  M  E  K
Sbjct: 441 NALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKE-LK 499

Query: 222 PDLYAITSVLHACACSGSLDHGR 290
           PD   +  +L ACA   +L+ G+
Sbjct: 500 PDSRTMACILPACASLSALERGK 522



 Score = 39.3 bits (90), Expect(2) = 1e-13
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ 400
           +FD    KD++SW  MI GY  +   NEA++ F EM+
Sbjct: 559 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMR 595



 Score = 67.8 bits (164), Expect(2) = 2e-12
 Identities = 36/86 (41%), Positives = 50/86 (58%)
 Frame = +3

Query: 33  TLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESE 212
           ++VNSL+  Y K    + A  LF+++ +R V+SW SMISGY  NG  E    +++ M   
Sbjct: 236 SVVNSLIAFYFKGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYL 295

Query: 213 GFKPDLYAITSVLHACACSGSLDHGR 290
           G   DL  I SVL  CA SG+L  G+
Sbjct: 296 GIDVDLATIISVLVGCANSGTLSLGK 321



 Score = 31.6 bits (70), Expect(2) = 2e-12
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ 400
           VF++   ++++SW +MI GY+++   + A+ L  +M+
Sbjct: 358 VFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQME 394



 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 33/90 (36%), Positives = 52/90 (57%)
 Frame = +3

Query: 48  LVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFKPD 227
           LV  Y+ CGDL   +R+F+ ME+++V  W  M+S Y + G F+E+  LF++M  +G + +
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVN 199

Query: 228 LYAITSVLHACACSGSLDHGRFLIAQLGKI 317
            Y  + VL   A  GSL  G  +   L K+
Sbjct: 200 SYTFSCVLKCFAALGSLKEGECVHGYLLKL 229


>ref|XP_023884447.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic
           [Quercus suber]
          Length = 755

 Score =  115 bits (287), Expect(2) = 2e-37
 Identities = 54/96 (56%), Positives = 72/96 (75%)
 Frame = +3

Query: 3   SVKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEA 182
           ++K   + E+   N+L+D+YSKCGDLD A R+FE+M +RSVVSWTSM++G+ R G  + A
Sbjct: 208 AIKSCFDGELMFNNTLLDMYSKCGDLDAATRVFEKMGKRSVVSWTSMMAGFVREGLSDGA 267

Query: 183 TALFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
             LF  ME +G  PDL+ ITSVLHACAC+GSL+ GR
Sbjct: 268 IRLFSEMERKGVSPDLFTITSVLHACACNGSLESGR 303



 Score = 68.9 bits (167), Expect(2) = 2e-37
 Identities = 32/48 (66%), Positives = 37/48 (77%)
 Frame = +2

Query: 284 WEVFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           + +F     KDIISWNTMIGGYSKN LPNEAL+LF EMQ   +PNS+T
Sbjct: 338 YSIFSHMQVKDIISWNTMIGGYSKNRLPNEALNLFVEMQRVIKPNSIT 385



 Score = 72.0 bits (175), Expect(2) = 2e-14
 Identities = 38/86 (44%), Positives = 52/86 (60%)
 Frame = +3

Query: 33  TLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESE 212
           T+VNSL+  Y KCG ++ A++LF+ + +R V+SW SMISGY  NG  +     F+ M   
Sbjct: 117 TVVNSLIAFYFKCGRVESAQKLFDELGDRDVISWNSMISGYALNGLAKRGIEFFKEMLCL 176

Query: 213 GFKPDLYAITSVLHACACSGSLDHGR 290
           G   DL  I +VL ACA   +L  GR
Sbjct: 177 GVDIDLATIVNVLVACASIRTLLVGR 202



 Score = 34.7 bits (78), Expect(2) = 2e-14
 Identities = 12/37 (32%), Positives = 25/37 (67%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQ 400
           VF++  ++ ++SW +M+ G+ +  L + A+ LF EM+
Sbjct: 239 VFEKMGKRSVVSWTSMMAGFVREGLSDGAIRLFSEME 275



 Score = 66.2 bits (160), Expect(2) = 2e-14
 Identities = 31/83 (37%), Positives = 51/83 (61%)
 Frame = +3

Query: 42  NSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFK 221
           N+L+D+Y+KCG ++ A  +F  M+ + ++SW +MI GY++N    EA  LF  M+    K
Sbjct: 322 NALMDMYAKCGSMEDAYSIFSHMQVKDIISWNTMIGGYSKNRLPNEALNLFVEMQ-RVIK 380

Query: 222 PDLYAITSVLHACACSGSLDHGR 290
           P+   +  +L ACA   +L+ GR
Sbjct: 381 PNSITMACILPACASLAALERGR 403



 Score = 40.0 bits (92), Expect(2) = 2e-14
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSH-FRPNSVT 427
           +FD T  KD+ISW  MI GY  +   +EA++ F  M++    P+ VT
Sbjct: 440 LFDMTPSKDLISWTVMIAGYGMHGFGSEAIATFNAMRNEGVEPDEVT 486



 Score = 77.4 bits (189), Expect = 9e-14
 Identities = 37/82 (45%), Positives = 52/82 (63%)
 Frame = +3

Query: 42  NSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFK 221
           N+LVD+Y KCG L  A+ LF+    + ++SWT MI+GY  +G+  EA A F  M +EG +
Sbjct: 422 NALVDMYVKCGVLVLARLLFDMTPSKDLISWTVMIAGYGMHGFGSEAIATFNAMRNEGVE 481

Query: 222 PDLYAITSVLHACACSGSLDHG 287
           PD     S+L+AC+ SG L  G
Sbjct: 482 PDEVTFISILYACSHSGLLSEG 503



 Score = 58.2 bits (139), Expect(2) = 1e-11
 Identities = 30/85 (35%), Positives = 49/85 (57%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           L + LV +Y KCGDL   +R+F+++    V  W  MIS Y++ G F E+  LF  M+  G
Sbjct: 17  LGSKLVFMYVKCGDLREGRRVFDKVANEKVFLWNLMISEYSKIGDFGESICLFMKMQELG 76

Query: 216 FKPDLYAITSVLHACACSGSLDHGR 290
            + + +  +SVL   A  G+++ G+
Sbjct: 77  IEVNSHTFSSVLKCFAALGNIEGGQ 101



 Score = 38.9 bits (89), Expect(2) = 1e-11
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +2

Query: 287 EVFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEM 397
           ++FD    +D+ISWN+MI GY+ N L    +  F EM
Sbjct: 137 KLFDELGDRDVISWNSMISGYALNGLAKRGIEFFKEM 173


>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic [Citrus sinensis]
          Length = 872

 Score =  120 bits (301), Expect(2) = 3e-37
 Identities = 58/96 (60%), Positives = 74/96 (77%)
 Frame = +3

Query: 3   SVKVYGNKEITLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEA 182
           ++K   +KEI+  N+L+D+YSKCGDLD A R+FE+M ERSVVSWTSMI+GY R G F+ A
Sbjct: 325 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 384

Query: 183 TALFEMMESEGFKPDLYAITSVLHACACSGSLDHGR 290
             LF  M  EG +PD+YAITS+LHACAC G L+ G+
Sbjct: 385 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 420



 Score = 62.8 bits (151), Expect(2) = 3e-37
 Identities = 29/46 (63%), Positives = 34/46 (73%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEMQSHFRPNSVT 427
           VF++   KDI+SWNTMIGGYSKN  PNEAL LF  M  +F P+ VT
Sbjct: 457 VFNQMPVKDIVSWNTMIGGYSKNSCPNEALDLFVAMLQNFEPDGVT 502



 Score = 68.9 bits (167), Expect(2) = 1e-12
 Identities = 36/86 (41%), Positives = 51/86 (59%)
 Frame = +3

Query: 33  TLVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESE 212
           T++NSL+  Y K   +  A +LF+ + +R VVSW  MISGY  NG  E+   +F+ M + 
Sbjct: 234 TVLNSLITYYFKSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 293

Query: 213 GFKPDLYAITSVLHACACSGSLDHGR 290
           GF  DL  + +VL  CA  G+L  GR
Sbjct: 294 GFNVDLATMVTVLSGCANCGALMFGR 319



 Score = 31.2 bits (69), Expect(2) = 1e-12
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +2

Query: 290 VFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEM 397
           VF++   + ++SW +MI GY++  + + A+ LF  M
Sbjct: 356 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 391



 Score = 73.9 bits (180), Expect = 2e-12
 Identities = 35/84 (41%), Positives = 54/84 (64%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           + N++VD+Y KCG L  A+ LF+ +  + ++SWT MI+GY  +G+  +A A F  M   G
Sbjct: 537 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 596

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
            +PD  +  SVL+AC+ SG +D G
Sbjct: 597 IEPDEVSFISVLYACSHSGLVDEG 620



 Score = 71.6 bits (174), Expect = 1e-11
 Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
 Frame = +3

Query: 42  NSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEGFK 221
           N+L+D+Y+KCG +  A+ +F +M  + +VSW +MI GY++N    EA  LF  M  + F+
Sbjct: 439 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGGYSKNSCPNEALDLFVAM-LQNFE 497

Query: 222 PDLYAITSVLHACACSGSLDHGRFLIAQLGKISSHGIQ*SEGILRIAFQMKHSVS-LVRC 398
           PD   +  +L ACA   +L+ GR +    G I  HGI     +      M      LV  
Sbjct: 498 PDGVTMACILPACASLAALERGREI---HGYILRHGISADRNVANAIVDMYVKCGVLVLA 554

Query: 399 NPTSDLIP 422
               D+IP
Sbjct: 555 RSLFDMIP 562



 Score = 54.7 bits (130), Expect(2) = 2e-10
 Identities = 27/84 (32%), Positives = 46/84 (54%)
 Frame = +3

Query: 36  LVNSLVDVYSKCGDLDCAKRLFERMEERSVVSWTSMISGYTRNGWFEEATALFEMMESEG 215
           L + LV ++  CGDL   +R+F +++   V  W  ++  Y++ G F+E+  LF+ M+S G
Sbjct: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193

Query: 216 FKPDLYAITSVLHACACSGSLDHG 287
              D Y  + VL   A  G++  G
Sbjct: 194 IAADSYTFSCVLKCLAVVGNVKEG 217



 Score = 38.5 bits (88), Expect(2) = 2e-10
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +2

Query: 287 EVFDRTTRKDIISWNTMIGGYSKNCLPNEALSLFGEM 397
           ++FD  + +D++SWN MI GY  N +  + L +F EM
Sbjct: 254 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 290