BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00035099
         (595 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    61   2e-07
gb|AQK71160.1| Ubiquitin-activating enzyme E1 domain-containing ...    60   5e-07
gb|AQK68857.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]    60   6e-07
gb|AQK72715.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]    60   6e-07
gb|ONM31803.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]    59   1e-06
gb|AQK78701.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]    59   2e-06
gb|PKU83276.1| ubiquitin-protein ligase E3 C [Dendrobium catenatum]    56   3e-06
ref|XP_020404050.1| uncharacterized protein LOC109944040 [Zea mays]    56   7e-06
gb|PKU76023.1| integrator complex subunit 11 [Dendrobium catenatum]    54   9e-06
gb|PKU76454.1| ataxia telangiectasia mutated family protein [Den...    56   1e-05
gb|AQK95272.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]    56   1e-05

>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
 Frame = +3

Query: 117 RVSRKIIWWIL----LFNIYINEIKDMEHEKGLISTPITRGETDPFPITC-LHQGTELS- 278
           RVSR IIW IL    +   YI  IKDM +E    +     G+T+ FPIT  LHQG+ LS 
Sbjct: 315 RVSRDIIWRILEKKGVRVAYIQAIKDM-YEGAKTAVRTYEGQTESFPITVGLHQGSSLSP 373

Query: 279 HLFAIITAELTRQTGYGVLWYLSFEYSIMLVDKIRE 386
           +LFA++  ELT      + W + F Y I+L+D+ +E
Sbjct: 374 YLFALVMDELTGHIQDDIPWCMLFAYDIVLIDETQE 409


>gb|AQK71160.1| Ubiquitin-activating enzyme E1 domain-containing protein 1 [Zea
           mays]
          Length = 897

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
 Frame = +3

Query: 117 RVSRKIIWWIL----LFNIYINEIKDMEHEKGLISTPITRGETDPFPITC-LHQGTELS- 278
           +VSR +IWW L    +   YIN IKDM +   + S   + G+TD FPI   LHQG+ LS 
Sbjct: 546 KVSRSVIWWALEKHKVATKYINLIKDM-YTNVVTSVRTSDGDTDDFPINIGLHQGSALSP 604

Query: 279 HLFAIITAELTRQTGYGVLWYLSFEYSIMLVDKIR 383
           +LFA++  E+TR     + W + F   ++L+++ R
Sbjct: 605 YLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESR 639


>gb|AQK68857.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 557

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
 Frame = +3

Query: 117 RVSRKIIWWIL----LFNIYINEIKDMEHEKGLISTPITRGETDPFPITC-LHQGTELS- 278
           +V R ++WW L    +   YIN IKDM +   + S   + G+TD FPI   LHQG+ LS 
Sbjct: 221 KVPRSVMWWALEKHKVSTKYINLIKDM-YTNVVTSVRTSDGDTDDFPINIGLHQGSALSP 279

Query: 279 HLFAIITAELTRQTGYGVLWYLSFEYSIMLVDKIR 383
           +LFA++  E+TR     +LW + F   ++L+++ R
Sbjct: 280 YLFALVIDEVTRDIQGDILWCMLFADDVVLIEESR 314


>gb|AQK72715.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 605

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
 Frame = +3

Query: 117 RVSRKIIWWIL----LFNIYINEIKDMEHEKGLISTPITRGETDPFPITC-LHQGTELSH 281
           ++ R ++WWIL    +   Y+  IKDM ++K + S   T G+T+ FPI   L+QG+ LSH
Sbjct: 388 KIPRNLMWWILDKHKVPTKYVTLIKDM-YDKVVTSVRTTDGDTNVFPINIGLNQGSALSH 446

Query: 282 -LFAIITAELTRQTGYGVLWYLSFEYSIMLVDKIRE 386
            LFA++  E+TR     + W + F   + LVD+ RE
Sbjct: 447 YLFALVIDEVTRDIQGDIPWCMLFADDVALVDESRE 482


>gb|ONM31803.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 474

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
 Frame = +3

Query: 117 RVSRKIIWWIL----LFNIYINEIKDMEHEKGLISTPITRGETDPFPITC-LHQGTELS- 278
           ++ R ++WW L    +   Y+  IKD+ ++K + S   T  +T+ FPI   LHQG+ LS 
Sbjct: 138 KIPRNLMWWTLDKHNVLTKYVTLIKDI-YDKVVTSVRTTDSDTNVFPINIGLHQGSALSP 196

Query: 279 HLFAIITAELTRQTGYGVLWYLSFEYSIMLVDKIREETILK 401
           +LFA++  E+TR     + W + F   ++LVD+ RE   +K
Sbjct: 197 YLFALLIDEITRDIQEDIPWCMLFADDVVLVDESREGVYIK 237


>gb|AQK78701.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
 Frame = +3

Query: 117 RVSRKIIWWIL----LFNIYINEIKDMEHEKGLISTPITRGETDPFPITC-LHQGTELS- 278
           +V R ++WW L    +   YIN IKDM +   + S   + G+TD FPI   LHQG+ LS 
Sbjct: 680 KVPRSVMWWALEKHKVATKYINLIKDM-YTNVVTSVRTSDGDTDDFPINIGLHQGSALSP 738

Query: 279 HLFAIITAELTRQTGYGVLWYLSFEYSIMLVDKIR 383
           +LFA++  E+TR     + W + F   ++L+D+ R
Sbjct: 739 YLFALVIDEVTRDIQGDIPWCMLFADDVVLIDESR 773


>gb|PKU83276.1| ubiquitin-protein ligase E3 C [Dendrobium catenatum]
          Length = 175

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 42/97 (43%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
 Frame = +3

Query: 117 RVSRKIIWWIL----LFNIYINEIKDMEHEKGLISTPITRGE-TDPFPITC-LHQGTELS 278
           +VSR+++W +L    + N YI  IKDM    G I+   T+G  T  FPI+  LHQG+ LS
Sbjct: 40  KVSREVLWRVLEKKRVNNAYIQIIKDMY--AGAITCVQTQGGLTKYFPISVGLHQGSALS 97

Query: 279 -HLFAIITAELTRQTGYGVLWYLSFEYSIMLVDKIRE 386
            +LFA++   LTR     V W + F   I+LVDK RE
Sbjct: 98  PYLFALVMDVLTRHLQEDVPWCMLFADDILLVDKTRE 134


>ref|XP_020404050.1| uncharacterized protein LOC109944040 [Zea mays]
          Length = 375

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
 Frame = +3

Query: 102 KILDTRVSRKIIWWIL----LFNIYINEIKDMEHEKGLISTPITRGETDPFPITC-LHQG 266
           K+ D ++ R ++WW L    +   Y+  IKDM ++K + S  IT G+T+ F I   LH+G
Sbjct: 46  KVYD-KIPRNLMWWALDKYKVSTKYVMLIKDM-YDKVVTSVRITDGDTNVFTINIILHKG 103

Query: 267 TELS-HLFAIITAELTRQTGYGVLWYLSFEYSIMLVDKIRE 386
           + LS +LFA++  E+TR     + W + F   ++LVD+ RE
Sbjct: 104 STLSPYLFALVIDEVTRDIQGDIPWCMLFVDDVVLVDESRE 144


>gb|PKU76023.1| integrator complex subunit 11 [Dendrobium catenatum]
          Length = 146

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
 Frame = +3

Query: 117 RVSRKIIWWIL----LFNIYINEIKDMEHEKGLISTPITRGE-TDPFPITC-LHQGTELS 278
           +V R+++W +L    + N YI  IKDM    G I+   T+G  T  FPI+  LHQG+ LS
Sbjct: 40  KVPREVLWRVLEKKGVNNAYIQIIKDMY--AGAITCVQTQGGLTKYFPISVGLHQGSALS 97

Query: 279 -HLFAIITAELTRQTGYGVLWYLSFEYSIMLVDKIRE 386
            +LFA++   LTR     V W + F   I+LVDK RE
Sbjct: 98  PYLFALVLDVLTRHLQEDVPWCMLFADDILLVDKTRE 134


>gb|PKU76454.1| ataxia telangiectasia mutated family protein [Dendrobium catenatum]
          Length = 377

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 42/97 (43%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
 Frame = +3

Query: 117 RVSRKIIWWIL----LFNIYINEIKDMEHEKGLISTPITRGE-TDPFPITC-LHQGTELS 278
           +VSR+++W +L    + N YI  IKDM    G I+   T+G  T  FPI+  LHQG+ LS
Sbjct: 40  KVSREVLWRVLEKKGVNNAYIQIIKDMY--AGAITCVQTQGGLTKYFPISVGLHQGSALS 97

Query: 279 -HLFAIITAELTRQTGYGVLWYLSFEYSIMLVDKIRE 386
            +LFA++   LTR     V W + F   I+LVDK RE
Sbjct: 98  PYLFALVLDVLTRHLQEDVPWCMFFADDILLVDKTRE 134


>gb|AQK95272.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 383

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
 Frame = +3

Query: 117 RVSRKIIWWIL----LFNIYINEIKDMEHEKGLISTPITRGETDPFPITC-LHQGTELS- 278
           ++ R  +WW L    +   Y+  IKDM ++K + S   T G+T+ FPI   LHQG+ LS 
Sbjct: 47  KIPRNRMWWPLDKHKVPRKYVTLIKDM-YDKVVTSIRTTDGDTNVFPINIGLHQGSTLSP 105

Query: 279 HLFAIITAELTRQTGYGVLWYLSFEYSIMLVDKIRE 386
           +LFA++  E+TR     + W + F   ++LVD+ RE
Sbjct: 106 YLFALVINEVTRDIQGDIPWCMLFADDVVLVDESRE 141