BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00035068
         (478 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KUM45132.1| hypothetical protein ABT39_MTgene3632 (mitochondr...    63   5e-09
gb|PNT60803.1| hypothetical protein BRADI_5g05195v3 [Brachypodiu...    52   3e-08
gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]               62   6e-08
gb|OMP07498.1| hypothetical protein COLO4_07290 [Corchorus olito...    60   6e-08
gb|ONM59806.1| Serine/arginine-rich splicing factor SC35 [Zea mays]    59   1e-07
gb|OMO94054.1| reverse transcriptase [Corchorus capsularis]            60   2e-07
ref|XP_020394196.1| uncharacterized protein LOC109939984 isoform...    59   3e-07
ref|XP_020270825.1| uncharacterized protein LOC109846014 [Aspara...    50   7e-07
gb|OVA05420.1| Reverse transcriptase zinc-binding domain [Maclea...    57   1e-06
gb|OAY78804.1| putative ribonuclease H protein [Ananas comosus]        57   1e-06
gb|OMO94917.1| reverse transcriptase [Corchorus capsularis]            57   2e-06
ref|XP_019242031.1| PREDICTED: CLIP-associated protein-like [Nic...    56   4e-06
gb|OMO82979.1| hypothetical protein COLO4_22747 [Corchorus olito...    56   4e-06
ref|XP_009757738.1| PREDICTED: uncharacterized protein LOC104210...    55   5e-06
gb|PNT61791.1| hypothetical protein BRADI_5g20757v3 [Brachypodiu...    55   5e-06
gb|ABG66255.1| retrotransposon protein, putative, unclassified, ...    55   6e-06
gb|AAP54997.2| retrotransposon protein, putative, unclassified, ...    55   6e-06
dbj|BAH94044.1| Os07g0649700 [Oryza sativa Japonica Group]             51   8e-06
gb|EEC77962.1| hypothetical protein OsI_17322 [Oryza sativa Indi...    51   8e-06
gb|OMP07076.1| hypothetical protein COLO4_07649 [Corchorus olito...    55   9e-06

>gb|KUM45132.1| hypothetical protein ABT39_MTgene3632 (mitochondrion) [Picea
           glauca]
          Length = 218

 Score = 63.2 bits (152), Expect = 5e-09
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
 Frame = +1

Query: 118 MRQPFGAKYPMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHMVLSCK 297
           ++Q +  K P+K+++F WL+  + ILTW+  Q+   + P  C  C    E ++H+++ C 
Sbjct: 113 IQQLWNWKVPLKLKLFTWLIGKERILTWDAFQRRGWEGPGICLLCNNAPEDLQHLLVHCP 172

Query: 298 FVNERWVKSTVNLSLVI-----NLMDSQDIWSRVGKQGKRTMLH 414
           F  E W +S  + SL I      + D   +WS       R  +H
Sbjct: 173 FTKEVWYRSIKHFSLPIAWCGSTISDCFSLWSTQKSAPPRLAVH 216


>gb|PNT60803.1| hypothetical protein BRADI_5g05195v3 [Brachypodium distachyon]
          Length = 392

 Score = 51.6 bits (122), Expect(3) = 3e-08
 Identities = 26/92 (28%), Positives = 52/92 (56%)
 Frame = +1

Query: 109 DRSMRQPFGAKYPMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHMVL 288
           DR+ R  + AK P+K+++++WL+ +DAI T +N++K + +   +C  C ++ E++ H+  
Sbjct: 205 DRTFRHLWKAKIPLKIKIWMWLIWHDAIATKDNMKKQKWEGDYKCRFCSQN-ETIHHLFF 263

Query: 289 SCKFVNERWVKSTVNLSLVINLMDSQDIWSRV 384
            C      W      +SL+I      + +S+V
Sbjct: 264 GCDAAGYVW----SIVSLIIGAQMRSNCFSQV 291



 Score = 28.5 bits (62), Expect(3) = 3e-08
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 423 AAVCWNVCKERNNMVFRN 476
           AA+CW + K RNN  F N
Sbjct: 311 AAICWAIWKSRNNACFEN 328



 Score = 24.6 bits (52), Expect(3) = 3e-08
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 27  DGLNWN*EKSGVISVRSTYGFFIDRG 104
           D   W   K+G+ SV+S Y    +RG
Sbjct: 178 DHPKWKWTKAGIFSVKSMYSHLTNRG 203


>gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]
          Length = 2749

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/75 (36%), Positives = 43/75 (57%)
 Frame = +1

Query: 145  PMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHMVLSCKFVNERWVKS 324
            P K + F+WLVA+  + T + LQK     P RC  C +D+E+++HM++ C F  E W K 
Sbjct: 2591 PPKTKFFMWLVAHRKVWTADRLQKRGMDHPERCPLCDQDQETLDHMLIGCVFAREFWFKL 2650

Query: 325  TVNLSLVINLMDSQD 369
             + ++L      S+D
Sbjct: 2651 LLQVNLQFLAPQSED 2665


>gb|OMP07498.1| hypothetical protein COLO4_07290 [Corchorus olitorius]
          Length = 244

 Score = 60.5 bits (145), Expect = 6e-08
 Identities = 27/91 (29%), Positives = 49/91 (53%)
 Frame = +1

Query: 103 VADRSMRQPFGAKYPMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHM 282
           V+  + +Q +  + P K++ F+W    +A+ T+ NL K RC +   C+ C    ES+EH+
Sbjct: 76  VSKSTWKQIWKIQAPSKIKNFLWKACQNALATYQNLWKRRCCTTPTCQLCLHQEESVEHL 135

Query: 283 VLSCKFVNERWVKSTVNLSLVINLMDSQDIW 375
           +L C +V + W  S++   +    + S D W
Sbjct: 136 LLCCDWVQKVWFGSSLAYHVDRQSITSFDFW 166


>gb|ONM59806.1| Serine/arginine-rich splicing factor SC35 [Zea mays]
          Length = 181

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 28/70 (40%), Positives = 41/70 (58%)
 Frame = +1

Query: 145 PMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHMVLSCKFVNERWVKS 324
           P K + F+WLVA+  + T + LQ+     P RC  C +D+E++ HM+L C F  E W K 
Sbjct: 102 PPKSKFFMWLVAHKRVWTADRLQRRGMDHPERCPLCDQDQETLNHMLLGCVFAREFWFK- 160

Query: 325 TVNLSLVINL 354
              L L++NL
Sbjct: 161 ---LVLLVNL 167


>gb|OMO94054.1| reverse transcriptase [Corchorus capsularis]
          Length = 1740

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/91 (29%), Positives = 51/91 (56%)
 Frame = +1

Query: 103  VADRSMRQPFGAKYPMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHM 282
            V  R  ++ +  K P KV++F+W +   A+ T  NL K +C+    CE C ++ E++EHM
Sbjct: 1407 VDKRVWKEIWKIKAPSKVKVFMWRMCMGALATNENLWKRKCKQDPLCELCGQEVETIEHM 1466

Query: 283  VLSCKFVNERWVKSTVNLSLVINLMDSQDIW 375
            +L+C++  + W +    L +  + + + D W
Sbjct: 1467 ILTCEWTRKVWWEGCFGLKICKDRIRTMDQW 1497


>ref|XP_020394196.1| uncharacterized protein LOC109939984 isoform X1 [Zea mays]
          Length = 720

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/70 (40%), Positives = 41/70 (58%)
 Frame = +1

Query: 145 PMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHMVLSCKFVNERWVKS 324
           P K + F+WLVA+  + T + LQ+     P RC  C +D+E++ HM+L C F  E W K 
Sbjct: 369 PPKSKFFMWLVAHKKVWTTDRLQRRGMDHPERCPLCDQDQETLNHMLLGCVFAREFWFK- 427

Query: 325 TVNLSLVINL 354
              L L++NL
Sbjct: 428 ---LLLLVNL 434


>ref|XP_020270825.1| uncharacterized protein LOC109846014 [Asparagus officinalis]
          Length = 237

 Score = 50.1 bits (118), Expect(2) = 7e-07
 Identities = 23/65 (35%), Positives = 34/65 (52%)
 Frame = +1

Query: 145 PMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHMVLSCKFVNERWVKS 324
           P+KV++F WLV+N  + T  NL         RC  C  + ES +H+ +SC F +  W   
Sbjct: 64  PLKVKVFFWLVSNQKLNTMANLVSKGWNGDPRCPFCNLEVESQDHLFISCSFASSIWSIL 123

Query: 325 TVNLS 339
             N+S
Sbjct: 124 FPNIS 128



 Score = 30.8 bits (68), Expect(2) = 7e-07
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 27  DGLNWN*EKSGVISVRSTYGFFIDRGCRPKHATTIW 134
           D + W    SG+ SV+S Y      GC+ ++   IW
Sbjct: 24  DTIRWPLHSSGIFSVKSFYSVLNSGGCKSRYFNFIW 59


>gb|OVA05420.1| Reverse transcriptase zinc-binding domain [Macleaya cordata]
          Length = 312

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
 Frame = +1

Query: 70  SGQLTVSS---LIEVADRSMRQP----FGAKYPMKVRMFIWLVANDAILTWNNLQKSRCQ 228
           SG  TV S   + E  ++  R P    +   +P ++  F+WL+  +  LT +NLQK   Q
Sbjct: 123 SGDFTVKSCYLMDEGEEQLGRYPVKKIWSIAWPARIGFFLWLICQNRALTQDNLQKKGRQ 182

Query: 229 SPSRCE*CYEDRESMEHMVLSCKFVNERW 315
             +RC  C  D E+ EH+ L+CK+V + W
Sbjct: 183 LVNRCYLCSSDLETCEHLFLNCKYVKDVW 211


>gb|OAY78804.1| putative ribonuclease H protein [Ananas comosus]
          Length = 244

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 29/88 (32%), Positives = 47/88 (53%)
 Frame = +1

Query: 139 KYPMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHMVLSCKFVNERWV 318
           K P+++++F+WL A + +LT   L K   Q PS C  CY D E+++H++  C F  + W 
Sbjct: 151 KIPLRIKIFLWLAARNKLLTTCFLAKRGWQGPSICVLCYFDAETIDHLLFLCPFARDFW- 209

Query: 319 KSTVNLSLVINLMDSQDIWSRVGKQGKR 402
               N  L  ++   Q + S  G+ G R
Sbjct: 210 ----NFLLEPSMRMQQVLASTTGQLGDR 233


>gb|OMO94917.1| reverse transcriptase [Corchorus capsularis]
          Length = 1924

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/96 (30%), Positives = 48/96 (50%)
 Frame = +1

Query: 88   SSLIEVADRSMRQPFGAKYPMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRE 267
            SS  ++  R  +  +  K P KV++F+W +   A+ T   L K +C     C  C ED E
Sbjct: 1582 SSSHQIDKRLWKVIWSIKAPSKVKVFLWRMCRHALATNEELWKRKCLDEPICVLCGEDVE 1641

Query: 268  SMEHMVLSCKFVNERWVKSTVNLSLVINLMDSQDIW 375
            S+EH++L C +  + W +    L + I  + + D W
Sbjct: 1642 SVEHLILLCPWTRKVWWQGCFGLKICIERVRTIDQW 1677


>ref|XP_019242031.1| PREDICTED: CLIP-associated protein-like [Nicotiana attenuata]
          Length = 1833

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
 Frame = +1

Query: 70  SGQLTVSSLIEVADR--------SMRQPFGAKYPMKVRMFIWLVANDAILTWNNLQKSRC 225
           SG+ TV S  +  +R          +  +  K P KV  F WLVA +A+LT  NL K   
Sbjct: 370 SGRFTVGSAYKNLNRVGSQLSLWPWKHIWKVKIPYKVACFTWLVAKEAVLTQENLMKRGL 429

Query: 226 QSPSRCE*CYEDRESMEHMVLSCKFVNERW 315
              SRC  C +D E++ H+ L C+   + W
Sbjct: 430 SICSRCYLCGQDAETINHLFLHCRVTRQLW 459


>gb|OMO82979.1| hypothetical protein COLO4_22747 [Corchorus olitorius]
          Length = 331

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/96 (30%), Positives = 50/96 (52%)
 Frame = +1

Query: 88  SSLIEVADRSMRQPFGAKYPMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRE 267
           SS  +V  R  ++ +  K P KV++F+W +   A+ T   L K +C +   C  C ED E
Sbjct: 95  SSSHQVDRRLWKEIWHIKAPSKVKVFMWRLCRRALATNEELWKRKCIAEPVCVLCGEDVE 154

Query: 268 SMEHMVLSCKFVNERWVKSTVNLSLVINLMDSQDIW 375
           ++EHM+L C +  + W +    L +  + + + D W
Sbjct: 155 TIEHMLLLCSWTRKVWWQGCCGLKICCDRIRTLDQW 190


>ref|XP_009757738.1| PREDICTED: uncharacterized protein LOC104210521 isoform X3
           [Nicotiana sylvestris]
 ref|XP_009757739.1| PREDICTED: uncharacterized protein LOC104210521 isoform X3
           [Nicotiana sylvestris]
          Length = 234

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 27/65 (41%), Positives = 37/65 (56%)
 Frame = +1

Query: 121 RQPFGAKYPMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHMVLSCKF 300
           R  +  K P+KV  F W+   +A LT NNLQK      +RC  C  D+E++EH+ L C+F
Sbjct: 69  RMIWKTKAPVKVACFGWVTTWEACLTQNNLQKRGFSLCNRCYLCQVDQETVEHLFLRCRF 128

Query: 301 VNERW 315
             E W
Sbjct: 129 SRECW 133


>gb|PNT61791.1| hypothetical protein BRADI_5g20757v3 [Brachypodium distachyon]
          Length = 436

 Score = 55.1 bits (131), Expect(2) = 5e-06
 Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 12/106 (11%)
 Frame = +1

Query: 34  LIGIRKNQ-------V*SPSGQLTVSSLI-----EVADRSMRQPFGAKYPMKVRMFIWLV 177
           L+G+R NQ           SG+ +V S+         DRS +  + AK P+K+++++WL+
Sbjct: 204 LMGVRFNQDRDKPVWKWEKSGKFSVKSIYTHLSSNGIDRSFKHLWKAKIPLKIKIWLWLI 263

Query: 178 ANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHMVLSCKFVNERW 315
            ++AI T +N++K + +  ++C  C+E +E++ H+  +C  V   W
Sbjct: 264 WHNAIATKDNMKKRQWEGDTKCRFCHE-KETIGHLFFTCSAVAYVW 308



 Score = 22.7 bits (47), Expect(2) = 5e-06
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 423 AAVCWNVCKERNNMVF 470
           AA+CW + K RN   F
Sbjct: 347 AAICWAIWKIRNRACF 362


>gb|ABG66255.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
 dbj|BAF27207.1| Os10g0559400 [Oryza sativa Japonica Group]
 dbj|BAG89019.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 264

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/77 (32%), Positives = 40/77 (51%)
 Frame = +1

Query: 145 PMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHMVLSCKFVNERWVKS 324
           P+KV++F WL+  D + T  NL K +      C+ C +  E+ +HM  +C FV   W + 
Sbjct: 119 PLKVKLFAWLLVRDRLSTKQNLLKKKIVQNGVCDVCQQGDETADHMCFTCPFVQSFWERI 178

Query: 325 TVNLSLVINLMDSQDIW 375
            VN ++       QD+W
Sbjct: 179 RVNPTI-------QDVW 188


>gb|AAP54997.2| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
 dbj|BAG89630.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 274

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/77 (32%), Positives = 40/77 (51%)
 Frame = +1

Query: 145 PMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHMVLSCKFVNERWVKS 324
           P+KV++F WL+  D + T  NL K +      C+ C +  E+ +HM  +C FV   W + 
Sbjct: 119 PLKVKLFAWLLVRDRLSTKQNLLKKKIVQNGVCDVCQQGDETADHMCFTCPFVQSFWERI 178

Query: 325 TVNLSLVINLMDSQDIW 375
            VN ++       QD+W
Sbjct: 179 RVNPTI-------QDVW 188


>dbj|BAH94044.1| Os07g0649700 [Oryza sativa Japonica Group]
          Length = 1509

 Score = 51.2 bits (121), Expect(2) = 8e-06
 Identities = 22/60 (36%), Positives = 33/60 (55%)
 Frame = +1

Query: 136  AKYPMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHMVLSCKFVNERW 315
            A+ P +++ F+WL+     LT +NLQK        C  C  D+ES +H++L C F N  W
Sbjct: 1432 ARGPSRLKFFMWLITKGRCLTADNLQKRGWPHEDGCVLCNGDQESCDHLLLGCPFTNRIW 1491



 Score = 25.8 bits (55), Expect(2) = 8e-06
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +3

Query: 9    LSQDNQDGLNWN*EKSGVISVRSTYGFFIDRGCRPKHATTIW 134
            L +D QD  +W    + V    S Y  F     R + A  IW
Sbjct: 1389 LQEDAQDSTSWKLTPNRVFCTASVYEMFFAARVRSQCAELIW 1430


>gb|EEC77962.1| hypothetical protein OsI_17322 [Oryza sativa Indica Group]
          Length = 1104

 Score = 51.2 bits (121), Expect(2) = 8e-06
 Identities = 22/60 (36%), Positives = 33/60 (55%)
 Frame = +1

Query: 136  AKYPMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDRESMEHMVLSCKFVNERW 315
            A+ P +++ F+WL+     LT +NLQK        C  C  D+ES +H++L C F N  W
Sbjct: 1027 ARGPSRLKFFMWLITKGRCLTADNLQKRGWPHEDGCVLCNGDQESCDHLLLGCPFTNRIW 1086



 Score = 25.8 bits (55), Expect(2) = 8e-06
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +3

Query: 9    LSQDNQDGLNWN*EKSGVISVRSTYGFFIDRGCRPKHATTIW 134
            L +D QD  +W    + V    S Y  F     R + A  IW
Sbjct: 984  LQEDAQDSTSWKLTPNRVFCTASVYEMFFAARVRSQCAELIW 1025


>gb|OMP07076.1| hypothetical protein COLO4_07649 [Corchorus olitorius]
          Length = 759

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 27/97 (27%), Positives = 50/97 (51%)
 Frame = +1

Query: 85  VSSLIEVADRSMRQPFGAKYPMKVRMFIWLVANDAILTWNNLQKSRCQSPSRCE*CYEDR 264
           VSS  +V+    ++ +  + P K+++F+W V   A+ T   L K +C+    C+ C E+ 
Sbjct: 643 VSSSHQVSQIVWKEIWKIRAPSKIKVFLWRVCKKALATNEELWKRKCRPVPLCDICGEEI 702

Query: 265 ESMEHMVLSCKFVNERWVKSTVNLSLVINLMDSQDIW 375
           ES+EH++L C +    W +    L +    + + D W
Sbjct: 703 ESVEHLLLLCDWTKRVWWQGCFGLKICKERVRTIDQW 739