BLASTX nr result

ID: Ophiopogon27_contig00034997 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00034997
         (821 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KJB71940.1| hypothetical protein B456_011G148900, partial [Go...   124   2e-47
gb|AEQ94198.1| photosystem I assembly protein Ycf3, partial (chl...   161   3e-47
gb|AEQ94200.1| photosystem I assembly protein Ycf3, partial (chl...   161   4e-47
gb|EYU35343.1| hypothetical protein MIMGU_mgv11b014479mg [Erythr...   161   4e-47
gb|ESR44565.1| hypothetical protein CICLE_v10030468mg [Citrus cl...   161   4e-47
ref|WP_078101543.1| MULTISPECIES: tetratricopeptide repeat prote...   161   4e-47
gb|AKJ77620.1| photosystem I assembly protein Ycf3 (chloroplast)...   160   1e-46
gb|OTF97074.1| putative tetratricopeptide-like helical domain-co...   161   1e-46
gb|ESQ45950.1| hypothetical protein EUTSA_v10011045mg [Eutrema s...   161   1e-46
ref|XP_003606041.2| photosystem I assembly protein Ycf3 [Medicag...   161   1e-46
gb|AQX33540.1| hypothetical chloroplast RF34 (chloroplast) [Pity...   161   1e-46
gb|ARO79200.1| hypothetical chloroplast RF34, partial (chloropla...   161   2e-46
ref|YP_009356781.1| hypothetical protein (chloroplast) [Aethione...   161   2e-46
gb|ARC96343.1| photosystem I assembly protein ycf3, partial (pla...   161   2e-46
gb|AMX23159.1| hypothetical chloroplast RF34 (chloroplast) [Sola...   161   2e-46
dbj|BAF49855.1| hypothetical protein (chloroplast) [Aethionema g...   161   2e-46
ref|YP_001123374.1| hypothetical protein CabupaCp022 [Capsella b...   161   2e-46
gb|ALG63290.1| photosystem I assembly protein Ycf3 (chloroplast)...   161   2e-46
ref|YP_001123116.1| hypothetical protein OlpuCp022 [Olimarabidop...   161   2e-46
gb|AIP85231.1| Ycf3 (chloroplast) [Camellia sinensis]                 161   2e-46

>gb|KJB71940.1| hypothetical protein B456_011G148900, partial [Gossypium raimondii]
          Length = 208

 Score =  124 bits (310), Expect(2) = 2e-47
 Identities = 67/101 (66%), Positives = 72/101 (71%)
 Frame = -3

Query: 351 FWIPWIIPLSTMHRREEPYEMKISRTVLXXXXXXXXXXXXRMSAQSEGNYAEALQNYYEA 172
           F IPWII +  MH +EEP   + +                  SAQSEGNY EALQNYYEA
Sbjct: 125 FLIPWIILI--MHIKEEPELFESN---------------DDQSAQSEGNYVEALQNYYEA 167

Query: 171 MRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MRLEID YDRSYILYNIGLIHTSNGEHTKALEYYF+ALERN
Sbjct: 168 MRLEIDSYDRSYILYNIGLIHTSNGEHTKALEYYFQALERN 208



 Score = 94.7 bits (234), Expect(2) = 2e-47
 Identities = 60/126 (47%), Positives = 68/126 (53%)
 Frame = -1

Query: 734 CIAGQSYSNSTNRRHRGRSTTLGINNTKTLLFRYKLPFSLSVSGLTRMVGTTNIHLVRTL 555
           CI GQ Y  STNR HRGRSTT G    +  +    L  SLS S L  MVGTTNIHLVRTL
Sbjct: 22  CIVGQPYYTSTNRSHRGRSTTPGNQQHENFVINDSL--SLSGSELREMVGTTNIHLVRTL 79

Query: 554 DTRITIKDR*SD*FLEIVGVEDKEIVGVTISI*H*YDWC*EKNLLREGWLEISCKNTSSC 375
           DT ITI+D  +   +                          K+LL+EGWLEISCKN S  
Sbjct: 80  DTHITIEDLRTHLMI-------------------------RKDLLQEGWLEISCKNISPA 114

Query: 374 QFIIRI 357
           QFI+ I
Sbjct: 115 QFIMTI 120


>gb|AEQ94198.1| photosystem I assembly protein Ycf3, partial (chloroplast)
           [Cunninghamia lanceolata]
 gb|AGK45609.1| hypothetical chloroplast RF34, partial (chloroplast) [Elodea
           canadensis]
 gb|AGK45620.1| hypothetical chloroplast RF34, partial (chloroplast) [Elodea
           canadensis]
 gb|AGK45624.1| hypothetical chloroplast RF34, partial (chloroplast) [Elodea
           nuttallii]
 gb|AUT83552.1| Ycf3, partial (plastid) [Galium odoratum]
          Length = 76

 Score =  161 bits (407), Expect = 3e-47
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>gb|AEQ94200.1| photosystem I assembly protein Ycf3, partial (chloroplast)
           [Fraxinus chinensis]
          Length = 80

 Score =  161 bits (407), Expect = 4e-47
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>gb|EYU35343.1| hypothetical protein MIMGU_mgv11b014479mg [Erythranthe guttata]
          Length = 82

 Score =  161 bits (407), Expect = 4e-47
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>gb|ESR44565.1| hypothetical protein CICLE_v10030468mg [Citrus clementina]
 gb|ESR48771.1| hypothetical protein CICLE_v10010876mg [Citrus clementina]
 gb|ESR58768.1| hypothetical protein CICLE_v10004110mg [Citrus clementina]
          Length = 82

 Score =  161 bits (407), Expect = 4e-47
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>ref|WP_078101543.1| MULTISPECIES: tetratricopeptide repeat protein [Terrabacteria
           group]
 ref|YP_398330.1| photosystem I assembly protein Ycf3 [Lactuca sativa]
 dbj|BAE47595.1| photosystem I assembly protein ycf3 (chloroplast) [Lactuca sativa]
 gb|ACU16011.1| unknown [Glycine max]
 gb|EFH64629.1| photosystem I assembly protein Ycf3 [Arabidopsis lyrata subsp.
           lyrata]
 gb|KHN39943.1| Photosystem I assembly protein ycf3 [Glycine soja]
 gb|AJE73883.1| photosystem I assembly protein Ycf3 (plastid) [Vernonia baldwinii]
 gb|AKJ77455.1| photosystem I assembly protein Ycf3 (chloroplast) [Carthamus
           tinctorius]
 gb|ANC95058.1| hypothetical chloroplast RF34 (chloroplast) [Dunalia spathulata]
 gb|ONI30742.1| hypothetical protein PRUPE_1G271000 [Prunus persica]
 gb|OTF92497.1| putative 43kDa postsynaptic protein [Helianthus annuus]
 prf||1211235AE ORF 82
          Length = 82

 Score =  161 bits (407), Expect = 4e-47
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>gb|AKJ77620.1| photosystem I assembly protein Ycf3 (chloroplast) [Fagopyrum
           cymosum]
          Length = 82

 Score =  160 bits (404), Expect = 1e-46
 Identities = 75/76 (98%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>gb|OTF97074.1| putative tetratricopeptide-like helical domain-containing protein
           [Helianthus annuus]
          Length = 122

 Score =  161 bits (407), Expect = 1e-46
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>gb|ESQ45950.1| hypothetical protein EUTSA_v10011045mg [Eutrema salsugineum]
          Length = 122

 Score =  161 bits (407), Expect = 1e-46
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>ref|XP_003606041.2| photosystem I assembly protein Ycf3 [Medicago truncatula]
 gb|AES88238.2| photosystem I assembly protein Ycf3 [Medicago truncatula]
          Length = 122

 Score =  161 bits (407), Expect = 1e-46
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>gb|AQX33540.1| hypothetical chloroplast RF34 (chloroplast) [Pityopsis falcata]
          Length = 124

 Score =  161 bits (407), Expect = 1e-46
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43  MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 103 PFLPQAFNNMAVICHY 118


>gb|ARO79200.1| hypothetical chloroplast RF34, partial (chloroplast) [Gaultheria
           cardiosepala]
 gb|ARO80136.1| hypothetical chloroplast RF34, partial (chloroplast) [Gaultheria
           major]
          Length = 126

 Score =  161 bits (407), Expect = 2e-46
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>ref|YP_009356781.1| hypothetical protein (chloroplast) [Aethionema arabicum]
 gb|AQV10944.1| hypothetical protein (chloroplast) [Aethionema arabicum]
          Length = 126

 Score =  161 bits (407), Expect = 2e-46
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>gb|ARC96343.1| photosystem I assembly protein ycf3, partial (plastid) [Vauquelinia
           californica]
          Length = 126

 Score =  161 bits (407), Expect = 2e-46
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>gb|AMX23159.1| hypothetical chloroplast RF34 (chloroplast) [Solanum melongena]
          Length = 126

 Score =  161 bits (407), Expect = 2e-46
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>dbj|BAF49855.1| hypothetical protein (chloroplast) [Aethionema grandiflorum]
          Length = 126

 Score =  161 bits (407), Expect = 2e-46
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>ref|YP_001123374.1| hypothetical protein CabupaCp022 [Capsella bursa-pastoris]
 dbj|BAF50198.1| hypothetical protein (chloroplast) [Capsella bursa-pastoris]
          Length = 126

 Score =  161 bits (407), Expect = 2e-46
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>gb|ALG63290.1| photosystem I assembly protein Ycf3 (chloroplast) [Beta vulgaris
           subsp. vulgaris]
          Length = 126

 Score =  161 bits (407), Expect = 2e-46
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>ref|YP_001123116.1| hypothetical protein OlpuCp022 [Olimarabidopsis pumila]
 ref|YP_009179731.1| YCF3 (chloroplast) [Isatis tinctoria]
 ref|YP_009230822.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 ref|YP_009230907.1| ycf3 (chloroplast) [Arabidopsis cebennensis]
 ref|YP_009230992.1| ycf3 (chloroplast) [Arabidopsis pedemontana]
 ref|YP_009231076.1| hypothetical protein (chloroplast) [Camelina sativa]
 ref|YP_009257829.1| ycf3 (chloroplast) [Arabidopsis arenicola]
 ref|YP_009257914.1| ycf3 (chloroplast) [Arabidopsis croatica]
 ref|YP_009257999.1| ycf3 (chloroplast) [Arabidopsis neglecta]
 ref|YP_009258084.1| ycf3 (chloroplast) [Arabidopsis petrogena]
 ref|YP_009258169.1| ycf3 (chloroplast) [Arabidopsis suecica]
 ref|YP_009258254.1| ycf3 (chloroplast) [Arabidopsis umezawana]
 ref|YP_009355935.1| hypothetical protein (chloroplast) [Megadenia pygmaea]
 ref|YP_009356441.1| hypothetical protein (chloroplast) [Lepidium meyenii]
 ref|YP_009437970.1| ycf3 (chloroplast) [Bunias erucago]
 ref|YP_009438055.1| ycf3 (chloroplast) [Bunias orientalis]
 dbj|BAA84386.1| ycf3 (chloroplast) [Arabidopsis thaliana]
 dbj|BAF49940.1| hypothetical protein (chloroplast) [Olimarabidopsis pumila]
 dbj|BAF50024.1| hypothetical protein (chloroplast) [Arabis hirsuta]
 dbj|BAF50111.1| hypothetical protein (chloroplast) [Barbarea verna]
 dbj|BAF50287.1| hypothetical protein (chloroplast) [Crucihimalaya wallichii]
 dbj|BAF50375.1| hypothetical protein (chloroplast) [Draba nemorosa]
 dbj|BAF50462.1| hypothetical protein (chloroplast) [Lepidium virginicum]
 dbj|BAF50550.1| hypothetical protein (chloroplast) [Lobularia maritima]
 dbj|BAF50639.1| hypothetical protein (chloroplast) [Nasturtium officinale]
 gb|ALL45407.1| YCF3 (chloroplast) [Isatis tinctoria]
 emb|CUA65150.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CUA65235.1| ycf3 (chloroplast) [Arabidopsis cebennensis]
 emb|CUA65320.1| ycf3 (chloroplast) [Arabidopsis halleri subsp. halleri]
 emb|CUA65405.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. lyrata]
 emb|CUA65490.1| ycf3 (chloroplast) [Arabidopsis pedemontana]
 emb|CUA65575.1| hypothetical protein (chloroplast) [Capsella rubella]
 emb|CUA65659.1| hypothetical protein (chloroplast) [Camelina sativa]
 emb|CZF87577.1| ycf3 (chloroplast) [Arabidopsis arenicola]
 emb|CZF87662.1| ycf3 (chloroplast) [Arabidopsis arenicola]
 emb|CZF87747.1| ycf3 (chloroplast) [Arabidopsis arenicola]
 emb|CZF87832.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF87917.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF88002.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF88087.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF88172.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF88257.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF88342.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF88427.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF88512.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF88597.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF88682.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF88767.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF88852.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF88937.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF89022.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF89107.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF89192.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF89277.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF89362.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF89447.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF89532.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF89617.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF89702.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF89787.1| ycf3 (chloroplast) [Arabidopsis cebennensis]
 emb|CZF89872.1| ycf3 (chloroplast) [Arabidopsis cebennensis]
 emb|CZF89957.1| ycf3 (chloroplast) [Arabidopsis croatica]
 emb|CZF90042.1| ycf3 (chloroplast) [Arabidopsis croatica]
 emb|CZF90127.1| ycf3 (chloroplast) [Arabidopsis halleri subsp. dacica]
 emb|CZF90212.1| ycf3 (chloroplast) [Arabidopsis halleri subsp. gemmifera]
 emb|CZF90297.1| ycf3 (chloroplast) [Arabidopsis halleri subsp. gemmifera]
 emb|CZF90382.1| ycf3 (chloroplast) [Arabidopsis halleri subsp. halleri]
 emb|CZF90467.1| ycf3 (chloroplast) [Arabidopsis halleri subsp. halleri]
 emb|CZF90552.1| ycf3 (chloroplast) [Arabidopsis halleri subsp. ovirensis]
 emb|CZF90637.1| ycf3 (chloroplast) [Arabidopsis halleri subsp. ovirensis]
 emb|CZF90722.1| ycf3 (chloroplast) [Arabidopsis halleri subsp. tatrica]
 emb|CZF90807.1| ycf3 (chloroplast) [Arabidopsis halleri subsp. tatrica]
 emb|CZF90892.1| ycf3 (chloroplast) [Arabidopsis kamchatica subsp. kamchatica]
 emb|CZF90977.1| ycf3 (chloroplast) [Arabidopsis kamchatica subsp. kamchatica]
 emb|CZF91062.1| ycf3 (chloroplast) [Arabidopsis kamchatica subsp. kamchatica]
 emb|CZF91147.1| ycf3 (chloroplast) [Arabidopsis kamchatica subsp. kawasakiana]
 emb|CZF91232.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. lyrata]
 emb|CZF91317.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF91402.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF91487.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF91572.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF91657.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF91742.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF91827.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF91912.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF91997.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF92082.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF92167.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF92252.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF92337.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF92422.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF92507.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF92592.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF92677.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF92762.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF92847.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF92932.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF93017.1| ycf3 (chloroplast) [Arabidopsis lyrata subsp. petraea]
 emb|CZF93102.1| ycf3 (chloroplast) [Arabidopsis neglecta subsp. neglecta]
 emb|CZF93187.1| ycf3 (chloroplast) [Arabidopsis neglecta subsp. neglecta]
 emb|CZF93272.1| ycf3 (chloroplast) [Arabidopsis neglecta subsp. neglecta]
 emb|CZF93357.1| ycf3 (chloroplast) [Arabidopsis neglecta subsp. neglecta]
 emb|CZF93442.1| ycf3 (chloroplast) [Arabidopsis neglecta]
 emb|CZF93527.1| ycf3 (chloroplast) [Arabidopsis neglecta]
 emb|CZF93612.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF93697.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF93782.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF93867.1| ycf3 (chloroplast) [Arabidopsis arenosa]
 emb|CZF93952.1| ycf3 (chloroplast) [Arabidopsis pedemontana]
 emb|CZF94037.1| ycf3 (chloroplast) [Arabidopsis petraea subsp. septentrionalis]
 emb|CZF94122.1| ycf3 (chloroplast) [Arabidopsis petraea subsp. septentrionalis]
 emb|CZF94207.1| ycf3 (chloroplast) [Arabidopsis petraea subsp. umbrosa]
 emb|CZF94292.1| ycf3 (chloroplast) [Arabidopsis petraea subsp. umbrosa]
 emb|CZF94377.1| ycf3 (chloroplast) [Arabidopsis petrogena]
 emb|CZF94462.1| ycf3 (chloroplast) [Arabidopsis petrogena]
 emb|CZF94547.1| ycf3 (chloroplast) [Arabidopsis petrogena]
 emb|CZF94632.1| ycf3 (chloroplast) [Arabidopsis petrogena]
 emb|CZF94717.1| ycf3 (chloroplast) [Arabidopsis petrogena]
 emb|CZF94802.1| ycf3 (chloroplast) [Arabidopsis suecica]
 emb|CZF94887.1| ycf3 (chloroplast) [Arabidopsis suecica]
 emb|CZF94972.1| ycf3 (chloroplast) [Arabidopsis suecica]
 emb|CZF95057.1| ycf3 (chloroplast) [Arabidopsis umezawana]
 gb|APO09259.1| hypothetical protein (chloroplast) [Megadenia pygmaea]
 gb|AQV10603.1| hypothetical protein (chloroplast) [Lepidium meyenii]
 emb|CUA64810.1| ycf3 (chloroplast) [Bunias orientalis]
 emb|CUA64895.1| ycf3 (chloroplast) [Bunias erucago]
 emb|CUA64980.1| ycf3 (chloroplast) [Bunias orientalis]
 emb|CUA65065.1| ycf3 (chloroplast) [Bunias orientalis]
 emb|SOF61600.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98885.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98627.1| ycf3 (plastid) [Arabidopsis arenosa subsp. borbasii]
 emb|SOG98756.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98470.1| ycf3 (plastid) [Arabidopsis arenosa subsp. borbasii]
 emb|SOG99146.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98694.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98600.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98601.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98654.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98507.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98503.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98501.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98387.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOH00170.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOH00255.1| ycf3 (plastid) [Arabidopsis arenosa subsp. borbasii]
 emb|SOG98494.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98551.1| ycf3 (plastid) [Arabidopsis arenosa subsp. borbasii]
 emb|SOG98398.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98544.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98621.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98577.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98530.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOG98582.1| ycf3 (plastid) [Arabidopsis arenosa subsp. borbasii]
 emb|SOG98624.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOH00018.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOH00050.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
 emb|SOH00340.1| ycf3 (plastid) [Arabidopsis lyrata subsp. petraea]
          Length = 126

 Score =  161 bits (407), Expect = 2e-46
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


>gb|AIP85231.1| Ycf3 (chloroplast) [Camellia sinensis]
          Length = 126

 Score =  161 bits (407), Expect = 2e-46
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 228 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 49
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 48  PFLPQAFNNMAVICHY 1
           PFLPQAFNNMAVICHY
Sbjct: 61  PFLPQAFNNMAVICHY 76


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