BLASTX nr result

ID: Ophiopogon27_contig00034772 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00034772
         (985 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY67095.1| Zinc-finger homeodomain protein 11 [Ananas comosus]     57   5e-06
ref|XP_021318359.1| zinc-finger homeodomain protein 8 [Sorghum b...    58   7e-06

>gb|OAY67095.1| Zinc-finger homeodomain protein 11 [Ananas comosus]
          Length = 189

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
 Frame = -1

Query: 724 REMAEERNQNLQCMRSHGAGHGTYSFDGCSKFYSSE--PTNLWCDACGCHRRNHLKV 560
           RE   +R    +CMR+H A  GTY+ DGC ++ + E  P +L C ACGCHR  H KV
Sbjct: 3   RERVVQREVYKECMRNHAAKLGTYAADGCCEYTADEARPGSLSCAACGCHRNFHRKV 59


>ref|XP_021318359.1| zinc-finger homeodomain protein 8 [Sorghum bicolor]
          Length = 327

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 23/46 (50%), Positives = 31/46 (67%)
 Frame = -1

Query: 691 QCMRSHGAGHGTYSFDGCSKFYSSEPTNLWCDACGCHRRNHLKVAA 554
           +CMR+H A  G  +FDGC ++ +S P +L C ACGCHR  H + AA
Sbjct: 32  ECMRNHAAAMGGQAFDGCGEYMASSPDSLKCAACGCHRSFHRRAAA 77


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