BLASTX nr result

ID: Ophiopogon27_contig00034763 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00034763
         (584 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK77139.1| uncharacterized protein A4U43_C02F3500 [Asparagus...    89   2e-18
ref|XP_010906113.1| PREDICTED: F-box protein SKIP23-like [Elaeis...    87   2e-16
ref|XP_008780263.1| PREDICTED: putative F-box protein At2g33200,...    84   1e-15
dbj|GAV83371.1| F-box domain-containing protein/DUF295 domain-co...    57   5e-06

>gb|ONK77139.1| uncharacterized protein A4U43_C02F3500 [Asparagus officinalis]
          Length = 192

 Score = 88.6 bits (218), Expect = 2e-18
 Identities = 46/118 (38%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
 Frame = -3

Query: 489 VIAVSAEPFSHEFAMLIVDAYSGNVYSARSGEQEWSGHAY--EKGNDIVTQAVAVGVRFY 316
           +IA+S +P S +F+++ +  Y  +++  R  E++WS + Y  +   D + QAV    +FY
Sbjct: 73  IIALS-KPASPQFSLIALTGYPRSLHFIRQNEKKWSSYNYNLDVNTDEIIQAVTSNGKFY 131

Query: 315 ALTSSGRLASIDLDRSPILVWGVETERVQFDRAREHAYLLESDGEL-LAVIAQCRYQP 145
           A++S GRLA IDLDR  +L W V+  R++FD  REH Y LES+ E+ L ++A  +  P
Sbjct: 132 AMSSRGRLAFIDLDRDTVLEWKVDIARIKFDLRREHVYFLESNKEIVLVIVAYAKLSP 189


>ref|XP_010906113.1| PREDICTED: F-box protein SKIP23-like [Elaeis guineensis]
          Length = 391

 Score = 86.7 bits (213), Expect = 2e-16
 Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
 Frame = -3

Query: 486 IAVSAEPFSHEFAMLIVDAYSGNVYSARSGEQEWSGHAYEKGNDIVTQAVAVGVRFYALT 307
           IAVS+ P +   A+L+ +    + +  R G++ W      + +  + Q VAVG +FYALT
Sbjct: 163 IAVSSHPRAPYGAILVANLIKASFFYLRHGDRRWLKFLLGRQDGKLCQLVAVGGKFYALT 222

Query: 306 SSGRLASIDLDRSPILVWGVETERVQFDRAREHAYLLESDGELLAVIAQCRYQPDGTQAV 127
              RL  IDLDRSP+ V   +      +    HA+LLESDG+LL V   C    + T + 
Sbjct: 223 FQRRLVDIDLDRSPVAVVVNQDGSNLGNPYGTHAFLLESDGDLLVVAMNCPNLYEST-SF 281

Query: 126 RLLRLDVQSSTWINAADTMRGRALFLGPQGSMCAVA---GGCGGQ 1
           R+ R +V++S+W+   +++  R LFLGP   +   A   G  GG+
Sbjct: 282 RIWRRNVETSSWV-PMESIADRILFLGPGSPISTSAREHGVAGGR 325


>ref|XP_008780263.1| PREDICTED: putative F-box protein At2g33200, partial [Phoenix
           dactylifera]
          Length = 352

 Score = 84.0 bits (206), Expect = 1e-15
 Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 4/166 (2%)
 Frame = -3

Query: 486 IAVSAEPFSHEFAMLIVDAYSGNVYSARSGEQEWSGHAYEKGNDIVTQAVAVGVRFYALT 307
           IAVS+ P +   A+++ + ++ ++   R G++ W        +  V Q  AVG +FY +T
Sbjct: 168 IAVSSHPGAPYGAVVLANLWTVSLICKRPGDRHWLWFHLTGEDRRVCQVAAVGRKFYGIT 227

Query: 306 SSGRLASIDLDRSP-ILVWGVETERVQFDRAREHAYLLESDGELLAVIAQCRYQPDGTQA 130
              RL  ID DRSP ++V       +   + R H +L+ESDG+LLAV+  C      T +
Sbjct: 228 HGRRLVDIDPDRSPQVVVMNQVGSILGNPQGRTHVFLVESDGDLLAVVMSCPNLRRSTPS 287

Query: 129 VRLLRLDVQSSTWINAADTMRGRALFLGPQGSMCAVA---GGCGGQ 1
              LR DV++S W  A +++  R LFLG   S+   A   G  GG+
Sbjct: 288 FSFLRWDVETSFW-EAIESIGDRLLFLGLSSSISVAAREHGVAGGR 332


>dbj|GAV83371.1| F-box domain-containing protein/DUF295 domain-containing protein
           [Cephalotus follicularis]
          Length = 377

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
 Frame = -3

Query: 399 GEQEWSGHAYEK------GNDIVTQAVAVGVRFYALTSSGRLASI-DLDRSPILVWGVET 241
           G+ +W+   Y         N  + QAVA+  +FYAL++ G L +I D+D + +L  G   
Sbjct: 192 GDNKWNKRRYSHPLCNVYDNYCLKQAVALQGKFYALSNEGELVTIEDIDNAQLLFSGSAI 251

Query: 240 ERVQFDR-AREHAYLLESDGELLAVIAQCRYQPDGTQAVRLLRLDVQSSTWINAADTMRG 64
             +   +    H +L+E+ GE+L V+         ++ + L R+D +SS+W    +++  
Sbjct: 252 NGIVPRKFTSMHPFLVEAQGEILVVLLWIIL--GISRHIELFRMDFRSSSWAK-MESLGD 308

Query: 63  RALFLGPQGSMCAVAG 16
           R LFLG   S C  AG
Sbjct: 309 RVLFLGYNCSFCVAAG 324


Top