BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00034287
         (424 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OVA12342.1| Reverse transcriptase zinc-binding domain [Maclea...    42   1e-07
gb|OVA19679.1| Reverse transcriptase zinc-binding domain [Maclea...    41   7e-07
gb|EEE67600.1| hypothetical protein OsJ_25151 [Oryza sativa Japo...    41   5e-06
gb|OVA11923.1| Reverse transcriptase zinc-binding domain [Maclea...    43   6e-06
gb|AAP54997.2| retrotransposon protein, putative, unclassified, ...    40   7e-06
gb|ABG66255.1| retrotransposon protein, putative, unclassified, ...    40   7e-06

>gb|OVA12342.1| Reverse transcriptase zinc-binding domain [Macleaya cordata]
          Length = 264

 Score = 42.0 bits (97), Expect(2) = 1e-07
 Identities = 15/33 (45%), Positives = 25/33 (75%)
 Frame = +3

Query: 102 KIIWQNIVPLKVRIVVWAVFNNCLSTVDNLRKK 200
           K++W+  VP KV  ++W+VF N + T+DNLR++
Sbjct: 97  KMLWRKGVPSKVSFMIWSVFQNAIPTMDNLRRR 129



 Score = 41.6 bits (96), Expect(2) = 1e-07
 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +1

Query: 196 KKRIVIQDKCMFCKLEDGSIDHLFILCPFMRFFWDYVSYLFNFSCL-PSSVSDLWTDWRL 372
           ++ +V++++C  CK ++ ++ HLFI C   R  W Y    F    +  +S+ D +  W++
Sbjct: 128 RRGMVVRNRCWLCKQQEETVSHLFIHCSMARSIWQYFLRPFKVEWVTTTSIMDHFFWWKM 187

Query: 373 NF 378
            F
Sbjct: 188 KF 189


>gb|OVA19679.1| Reverse transcriptase zinc-binding domain [Macleaya cordata]
          Length = 465

 Score = 40.8 bits (94), Expect(2) = 7e-07
 Identities = 14/33 (42%), Positives = 25/33 (75%)
 Frame = +3

Query: 102 KIIWQNIVPLKVRIVVWAVFNNCLSTVDNLRKK 200
           K++W+  VP K+  ++W+VF N + T+DNLR++
Sbjct: 298 KMLWRKGVPSKLSFMIWSVFQNAIPTMDNLRRR 330



 Score = 40.0 bits (92), Expect(2) = 7e-07
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +1

Query: 196 KKRIVIQDKCMFCKLEDGSIDHLFILCPFMRFFWDYVSYLFNFSCL-PSSVSDLWTDWRL 372
           ++ +V+ ++C  CK ++ ++ HLFI C   R  W Y    F    +  +S+ D +  W++
Sbjct: 329 RRGMVVINRCWLCKQQEETVSHLFIHCSMARSIWQYFLRPFKVEWVTTASIMDHFFLWKM 388

Query: 373 NF 378
            F
Sbjct: 389 KF 390


>gb|EEE67600.1| hypothetical protein OsJ_25151 [Oryza sativa Japonica Group]
          Length = 408

 Score = 41.2 bits (95), Expect(2) = 5e-06
 Identities = 19/41 (46%), Positives = 23/41 (56%)
 Frame = +3

Query: 81  GIKCPFYKIIWQNIVPLKVRIVVWAVFNNCLSTVDNLRKKK 203
           G   P +K IW+   PLK+ I  W +  N LST  NL KKK
Sbjct: 238 GTSSPNWKFIWECRAPLKINIFAWLLVRNRLSTKKNLMKKK 278



 Score = 36.6 bits (83), Expect(2) = 5e-06
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +1

Query: 196 KKRIVIQDKCMFCKLEDGSIDHLFILCPFMRFFWDYV 306
           KK+IV    C  C L D + DHL   CPF   FW  +
Sbjct: 276 KKKIVQTAICEICNLADETADHLSFTCPFAISFWQTI 312


>gb|OVA11923.1| Reverse transcriptase zinc-binding domain [Macleaya cordata]
          Length = 169

 Score = 43.1 bits (100), Expect(2) = 6e-06
 Identities = 16/33 (48%), Positives = 25/33 (75%)
 Frame = +3

Query: 102 KIIWQNIVPLKVRIVVWAVFNNCLSTVDNLRKK 200
           K++W+  VP KV  ++W+VF N + T+DNLR+K
Sbjct: 97  KMLWRKGVPSKVSFMIWSVFQNAIPTMDNLRRK 129



 Score = 34.7 bits (78), Expect(2) = 6e-06
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 196 KKRIVIQDKCMFCKLEDGSIDHLFILCPFMRFFWDY 303
           +K +V+ ++C  CK    ++ HLF+ C   R  W Y
Sbjct: 128 RKGMVVINRCRLCKQHKETVSHLFLHCGMARSIWQY 163


>gb|AAP54997.2| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
 dbj|BAG89630.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 274

 Score = 40.0 bits (92), Expect(2) = 7e-06
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = +3

Query: 81  GIKCPFYKIIWQNIVPLKVRIVVWAVFNNCLSTVDNLRKKK 203
           GI  P + +IW+   PLKV++  W +  + LST  NL KKK
Sbjct: 104 GISSPNWNLIWKCRAPLKVKLFAWLLVRDRLSTKQNLLKKK 144



 Score = 37.4 bits (85), Expect(2) = 7e-06
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 196 KKRIVIQDKCMFCKLEDGSIDHLFILCPFMRFFWDYVSYLFNFSCLPSSVSDLW 357
           KK+IV    C  C+  D + DH+   CPF++ FW+ +        +  ++ D+W
Sbjct: 142 KKKIVQNGVCDVCQQGDETADHMCFTCPFVQSFWERIR-------VNPTIQDVW 188


>gb|ABG66255.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
 dbj|BAF27207.1| Os10g0559400 [Oryza sativa Japonica Group]
 dbj|BAG89019.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 264

 Score = 40.0 bits (92), Expect(2) = 7e-06
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = +3

Query: 81  GIKCPFYKIIWQNIVPLKVRIVVWAVFNNCLSTVDNLRKKK 203
           GI  P + +IW+   PLKV++  W +  + LST  NL KKK
Sbjct: 104 GISSPNWNLIWKCRAPLKVKLFAWLLVRDRLSTKQNLLKKK 144



 Score = 37.4 bits (85), Expect(2) = 7e-06
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 196 KKRIVIQDKCMFCKLEDGSIDHLFILCPFMRFFWDYVSYLFNFSCLPSSVSDLW 357
           KK+IV    C  C+  D + DH+   CPF++ FW+ +        +  ++ D+W
Sbjct: 142 KKKIVQNGVCDVCQQGDETADHMCFTCPFVQSFWERIR-------VNPTIQDVW 188