BLASTX nr result

ID: Ophiopogon27_contig00034088 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00034088
         (364 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX63758.1| polyadenylate-binding protein 3, partial [Trifoli...    55   8e-07
gb|PNX54503.1| polyadenylate-binding protein 3 [Trifolium pratense]    55   2e-06
gb|PNX55615.1| polyadenylate-binding protein 3, partial [Trifoli...    55   2e-06
ref|XP_020237636.1| uncharacterized protein LOC109816897 [Cajanu...    53   2e-06
gb|PNX98677.1| putative copia-type protein [Trifolium pratense]        55   2e-06
ref|XP_017242423.1| PREDICTED: uncharacterized protein LOC108214...    55   3e-06
ref|XP_023731939.1| DNA-binding protein HEXBP-like [Lactuca sativa]    54   5e-06
ref|XP_017245279.1| PREDICTED: uncharacterized protein LOC108216...    54   7e-06
ref|XP_017239529.1| PREDICTED: uncharacterized protein LOC108212...    54   7e-06

>gb|PNX63758.1| polyadenylate-binding protein 3, partial [Trifolium pratense]
          Length = 191

 Score = 55.5 bits (132), Expect = 8e-07
 Identities = 28/80 (35%), Positives = 41/80 (51%)
 Frame = -3

Query: 242 EGRSLQRSRSAEKKEWALIADFVRERGKKRKMEPELVTCFSCGETSHYIASCKHIFCYCC 63
           E R L +    ++K  +L   +V + G+ R  E   V CF C    HY ++C   FC  C
Sbjct: 34  EQRLLTQKTMEQQKAASLPLAYVVQ-GRPRGREMSTVQCFCCKGHGHYASNCPKKFCNYC 92

Query: 62  RKEGHLAPDCPFNPRVKTTT 3
           +K+GH+  +CP  P  KT T
Sbjct: 93  KKDGHIIKECPSRPPKKTAT 112


>gb|PNX54503.1| polyadenylate-binding protein 3 [Trifolium pratense]
          Length = 280

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 28/80 (35%), Positives = 41/80 (51%)
 Frame = -3

Query: 242 EGRSLQRSRSAEKKEWALIADFVRERGKKRKMEPELVTCFSCGETSHYIASCKHIFCYCC 63
           E R L +    ++K  +L   +V + G+ R  E   V CF C    HY ++C   FC  C
Sbjct: 169 EQRLLTQKTMEQQKAASLPLAYVVQ-GRPRGREMSTVQCFCCKGHGHYASNCPKKFCNYC 227

Query: 62  RKEGHLAPDCPFNPRVKTTT 3
           +K+GH+  +CP  P  KT T
Sbjct: 228 KKDGHIIKECPSRPPKKTAT 247


>gb|PNX55615.1| polyadenylate-binding protein 3, partial [Trifolium pratense]
          Length = 303

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 28/80 (35%), Positives = 41/80 (51%)
 Frame = -3

Query: 242 EGRSLQRSRSAEKKEWALIADFVRERGKKRKMEPELVTCFSCGETSHYIASCKHIFCYCC 63
           E R L +    ++K  +L   +V + G+ R  E   V CF C    HY ++C   FC  C
Sbjct: 146 EQRLLTQKTMEQQKAASLPLAYVVQ-GRPRGREMSTVQCFCCKGHGHYASNCPKKFCNYC 204

Query: 62  RKEGHLAPDCPFNPRVKTTT 3
           +K+GH+  +CP  P  KT T
Sbjct: 205 KKDGHIIKECPSRPPKKTAT 224


>ref|XP_020237636.1| uncharacterized protein LOC109816897 [Cajanus cajan]
 ref|XP_020208770.1| uncharacterized protein LOC109793716 [Cajanus cajan]
          Length = 109

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 19/44 (43%), Positives = 27/44 (61%)
 Frame = -3

Query: 134 VTCFSCGETSHYIASCKHIFCYCCRKEGHLAPDCPFNPRVKTTT 3
           + CFSC +  HY +SC   FC  C+K+GH+  +CP  P  +T T
Sbjct: 4   IQCFSCKQFGHYASSCPKKFCNYCKKDGHIIKECPIRPPRQTVT 47


>gb|PNX98677.1| putative copia-type protein [Trifolium pratense]
          Length = 877

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 28/80 (35%), Positives = 41/80 (51%)
 Frame = -3

Query: 242 EGRSLQRSRSAEKKEWALIADFVRERGKKRKMEPELVTCFSCGETSHYIASCKHIFCYCC 63
           E R L +    ++K  +L   +V + G+ R  E   V CF C    HY ++C   FC  C
Sbjct: 34  EQRLLTQKTMEQQKAASLPLAYVVQ-GRPRGREMSTVQCFCCKGHGHYASNCPKKFCNYC 92

Query: 62  RKEGHLAPDCPFNPRVKTTT 3
           +K+GH+  +CP  P  KT T
Sbjct: 93  KKDGHIIKECPSRPPKKTAT 112


>ref|XP_017242423.1| PREDICTED: uncharacterized protein LOC108214761 [Daucus carota
           subsp. sativus]
 ref|XP_017254442.1| PREDICTED: uncharacterized protein LOC108224370 [Daucus carota
           subsp. sativus]
          Length = 333

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 27/75 (36%), Positives = 38/75 (50%)
 Frame = -3

Query: 227 QRSRSAEKKEWALIADFVRERGKKRKMEPELVTCFSCGETSHYIASCKHIFCYCCRKEGH 48
           Q +   EK E   +A     +GK R  +   V CFSC    HY ++C   FC  C+K+GH
Sbjct: 205 QDTMKEEKSELVHVA--YATQGKPRGRDMRNVQCFSCKGFGHYASNCSKKFCNYCKKDGH 262

Query: 47  LAPDCPFNPRVKTTT 3
           +  +CP  P  K+ T
Sbjct: 263 IIKECPTRPPKKSET 277


>ref|XP_023731939.1| DNA-binding protein HEXBP-like [Lactuca sativa]
          Length = 256

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 26/54 (48%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
 Frame = -3

Query: 170 ERGKKRKME-----PELVTCFSCGETSHYIASC--KHIFCYCCRKEGHLAPDCP 30
           E GKKRK E     P+ VTCF CG+T HY   C  +   C+ C KEGH   +CP
Sbjct: 63  EVGKKRKFEGSSRCPKEVTCFKCGKTGHYAHECPTEEEVCFKCGKEGHFKQECP 116


>ref|XP_017245279.1| PREDICTED: uncharacterized protein LOC108216926 [Daucus carota
           subsp. sativus]
          Length = 568

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
 Frame = -3

Query: 140 ELVTCFSCGETSHYIASCKH--IFCYCCRKEGHLAPDCP 30
           E  TC+SCG+  HY +SCK   + C+ C KEGH+A DCP
Sbjct: 275 ESKTCYSCGKKGHYASSCKEKAVICFSCGKEGHMARDCP 313


>ref|XP_017239529.1| PREDICTED: uncharacterized protein LOC108212311 [Daucus carota
           subsp. sativus]
          Length = 262

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
 Frame = -3

Query: 140 ELVTCFSCGETSHYIASCKH--IFCYCCRKEGHLAPDCPFNPRVKTT 6
           E  TC+SCG+  HY +SCK   + C+ C K+GH+A DCP + +  +T
Sbjct: 157 ESKTCYSCGKKGHYASSCKEKAVICFSCGKKGHMARDCPQSQKESST 203


Top