BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00033610
         (394 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020531736.1| chromodomain-helicase-DNA-binding protein 3 ...   102   9e-23
ref|XP_011628632.2| chromodomain-helicase-DNA-binding protein 3 ...   102   9e-23

>ref|XP_020531736.1| chromodomain-helicase-DNA-binding protein 3 isoform X2 [Amborella
           trichopoda]
          Length = 1067

 Score =  102 bits (255), Expect = 9e-23
 Identities = 53/127 (41%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
 Frame = -1

Query: 379 RNWDGSMRER-SKRGKKSNVKAEEESFGIEKIKEILFDTEDRIPLEGVYSGNIEWWKAWH 203
           R W  S RER S+RG            G+  ++E+LF  EDRIP    +  ++ WWK WH
Sbjct: 64  RKWKSSTRERKSRRGG---------DHGLLSVQEMLFSMEDRIPPSVAFEKDLGWWKQWH 114

Query: 202 DDVNMVVVKNDIRGLMDATLSLALQLKPSITTTWWAKHSDGWKKCVKNVATLREATLVVN 23
           D V+  V   +IRG M+A L  ALQ+KP I   WWA +S+ WK  ++  +T+ EA LVV 
Sbjct: 115 DRVSKDVKSMNIRGTMNAALEFALQIKPEILLPWWATNSEDWKMRLRTASTVAEAQLVVR 174

Query: 22  DLRNNAL 2
           DL+  A+
Sbjct: 175 DLQFKAI 181


>ref|XP_011628632.2| chromodomain-helicase-DNA-binding protein 3 isoform X1 [Amborella
           trichopoda]
 gb|ERN19886.1| hypothetical protein AMTR_s00071p00058700 [Amborella trichopoda]
          Length = 1360

 Score =  102 bits (255), Expect = 9e-23
 Identities = 53/127 (41%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
 Frame = -1

Query: 379 RNWDGSMRER-SKRGKKSNVKAEEESFGIEKIKEILFDTEDRIPLEGVYSGNIEWWKAWH 203
           R W  S RER S+RG            G+  ++E+LF  EDRIP    +  ++ WWK WH
Sbjct: 64  RKWKSSTRERKSRRGG---------DHGLLSVQEMLFSMEDRIPPSVAFEKDLGWWKQWH 114

Query: 202 DDVNMVVVKNDIRGLMDATLSLALQLKPSITTTWWAKHSDGWKKCVKNVATLREATLVVN 23
           D V+  V   +IRG M+A L  ALQ+KP I   WWA +S+ WK  ++  +T+ EA LVV 
Sbjct: 115 DRVSKDVKSMNIRGTMNAALEFALQIKPEILLPWWATNSEDWKMRLRTASTVAEAQLVVR 174

Query: 22  DLRNNAL 2
           DL+  A+
Sbjct: 175 DLQFKAI 181