BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00033381
         (408 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK80561.1| uncharacterized protein A4U43_C01F19200 [Asparagu...    93   2e-19
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...    92   8e-19
emb|CDP17738.1| unnamed protein product [Coffea canephora]             91   2e-18
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    90   4e-18
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...    89   1e-17
emb|CDP17739.1| unnamed protein product [Coffea canephora]             87   2e-17
ref|XP_008374274.1| PREDICTED: alpha-mannosidase-like [Malus dom...    83   1e-15
ref|XP_016540818.1| PREDICTED: uncharacterized protein LOC107841...    70   3e-15
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024...    78   6e-14
gb|KYP36391.1| Retrovirus-related Pol polyprotein from transposo...    77   7e-14
gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposo...    77   8e-14
gb|OMO83367.1| Integrase, catalytic core [Corchorus capsularis]        77   1e-13
gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposo...    75   5e-13
gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposo...    74   9e-13
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...    74   1e-12
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...    74   1e-12
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    72   6e-12
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...    72   6e-12
gb|KYP64656.1| Retrovirus-related Pol polyprotein from transposo...    69   6e-12
gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo...    57   7e-12

>gb|ONK80561.1| uncharacterized protein A4U43_C01F19200 [Asparagus officinalis]
          Length = 499

 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 64/146 (43%), Positives = 83/146 (56%), Gaps = 14/146 (9%)
 Frame = -2

Query: 401 VRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLR-LTYTSHLKNKLPSSALN*KSP 225
           VR+  Q N V ER+N TLL  V C++  SGL R F    L Y SHL N+LP + +  K+P
Sbjct: 350 VRETPQRNRVAERLNRTLLENVQCIMTQSGLARSFWAEALVYASHLVNRLPCTVIEGKTP 409

Query: 224 MEIWF----------W*-GCQGL*LA*DIWVSNL-LSRQGRKVES*NKAIFIGFKR-VKG 84
           ME W+          W  GC          VSN  L+ + RK      AIF+GF+  VKG
Sbjct: 410 MEHWYGSVASDYETLWIFGCPAY-----FHVSNRKLNPRARK------AIFVGFRECVKG 458

Query: 83  YMFWDDEDKKIILSRDVTFDKTSMMK 6
           +  WD +DKK+++SRDVTFD+T MMK
Sbjct: 459 FKLWDLQDKKMVISRDVTFDETYMMK 484


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score = 91.7 bits (226), Expect = 8e-19
 Identities = 61/139 (43%), Positives = 85/139 (61%), Gaps = 5/139 (3%)
 Frame = -2

Query: 407 FTVRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLR-LTYTSHLKNKLPSSALN*K 231
           FTVRK  Q NGV+ERMN TL+ KV C+L ++ L R F    +TY  HL N+LPSSA++ K
Sbjct: 508 FTVRKTPQQNGVSERMNKTLVEKVCCMLSNAELGREFWAEAVTYAQHLVNRLPSSAIDGK 567

Query: 230 SPMEIWFW*GC---QGL*LA*DIWVSNLLSRQGRKVES*NKAIFIGFK-RVKGYMFWDDE 63
           +P+E+W          L +   I   +++  + +      KA+F+GF   VKGY  W  E
Sbjct: 568 TPLEVWSGKPATDYDSLHVFGSIAYYHVI--ESKLDPRAKKALFMGFSPGVKGYRLWCLE 625

Query: 62  DKKIILSRDVTFDKTSMMK 6
            KK I+SRDVTFD++ M+K
Sbjct: 626 KKKTIISRDVTFDESVMLK 644


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 62/142 (43%), Positives = 82/142 (57%), Gaps = 9/142 (6%)
 Frame = -2

Query: 407  FTVRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLR-LTYTSHLKNKLPSSALN*K 231
            F VRKI Q NGV+E MN TL+ KV C+L ++GL R F    +TY  HL N+LPSSA+  K
Sbjct: 594  FIVRKIPQQNGVSEHMNKTLVEKVRCMLSNAGLGRKFWAEAVTYAQHLVNRLPSSAIGGK 653

Query: 230  SPMEIWFW*GCQGL*LA*DIWVSNLLS-------RQGRKVES*NKAIFIGFKR-VKGYMF 75
            +P+E+W      G  LA D     +          + +      KA+F+GF   VKGY  
Sbjct: 654  TPLEVW-----SGK-LATDYDSLRIFDSTAYYHVNESKLDPRAKKALFMGFSAGVKGYRL 707

Query: 74   WDDEDKKIILSRDVTFDKTSMM 9
            W  E KK I+SRDVTFD++ M+
Sbjct: 708  WYLEAKKTIISRDVTFDESVML 729


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 89.7 bits (221), Expect = 4e-18
 Identities = 59/139 (42%), Positives = 85/139 (61%), Gaps = 5/139 (3%)
 Frame = -2

Query: 407 FTVRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLR-LTYTSHLKNKLPSSALN*K 231
           FT+RK  Q NGV+ERMN  L+ KV C+L ++ L R F    +TY  HL N+LPSSA++ K
Sbjct: 562 FTIRKTPQQNGVSERMNKILVEKVRCMLSNAELGRKFWAEAVTYAQHLVNRLPSSAIDGK 621

Query: 230 SPMEIWFW*GC---QGL*LA*DIWVSNLLSRQGRKVES*NKAIFIGFK-RVKGYMFWDDE 63
           +P+E+W          L +   I   +++  + +      KA+F+GF   VKGY  W  E
Sbjct: 622 TPLEVWSGKPATDYDSLHVFGSIAYYHVI--ESKLDPRAKKALFMGFSPGVKGYRLWCLE 679

Query: 62  DKKIILSRDVTFDKTSMMK 6
            KK I+SRDVTFD+++M+K
Sbjct: 680 AKKTIISRDVTFDESAMLK 698


>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1032

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 60/146 (41%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
 Frame = -2

Query: 407 FTVRKILQ*NGVTERMNCTLL*KVWCLLLHSGL-KRLFGLRLTYTSHLKNKLPSSALN*K 231
           FTV+   Q NGV ERMN TLL KV C+L ++GL K+ +   + Y SHL N+LPSSA+  K
Sbjct: 357 FTVKHTPQQNGVAERMNRTLLEKVRCMLSNAGLGKQFWAEAVVYASHLINRLPSSAIGGK 416

Query: 230 SPMEIWFW-----------*GCQGL*LA*DIWVSNLLSRQGRKVES*NKAIFIGF-KRVK 87
           +P+E WF             GC           +    ++ +      KAIF+G    VK
Sbjct: 417 TPLEKWFGKPATDYDSLHVFGC----------TAYYHVKESKLDPRAKKAIFMGIASGVK 466

Query: 86  GYMFWDDEDKKIILSRDVTFDKTSMM 9
           GY  W  E KK I+SRDVTFD+++M+
Sbjct: 467 GYRLWCLETKKTIISRDVTFDESTML 492


>emb|CDP17739.1| unnamed protein product [Coffea canephora]
          Length = 435

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 58/136 (42%), Positives = 80/136 (58%), Gaps = 3/136 (2%)
 Frame = -2

Query: 407 FTVRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLR-LTYTSHLKNKLPSSALN*K 231
           FTVRK  Q NGV+ERMN TL+ KV C+L ++ L R F    +TY  HL N+LPSSA+  K
Sbjct: 202 FTVRKTPQQNGVSERMNKTLVEKVHCMLSNARLGRKFWAETVTYAQHLVNRLPSSAIGGK 261

Query: 230 SPMEIWFW*GCQGL*LA*DIWVSNLLSRQGRKVE-S*NKAIFIGFKR-VKGYMFWDDEDK 57
           +P+E+W              + +        K++    KAIF+G    VKGY  W  E K
Sbjct: 262 TPLEVWSGKPTTDYDSLRIFYSTAYYHVNESKLDPRAKKAIFMGLNAGVKGYRLWCLEAK 321

Query: 56  KIILSRDVTFDKTSMM 9
           K I+SRDVTF++++M+
Sbjct: 322 KTIISRDVTFNESAML 337


>ref|XP_008374274.1| PREDICTED: alpha-mannosidase-like [Malus domestica]
          Length = 863

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 57/144 (39%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
 Frame = -2

Query: 407 FTVRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLR-LTYTSHLKNKLPSSALN*K 231
           F+VR   Q NGV +R+N TLL KV C+L  S L + F    + Y  H+ N+LPS+A   K
Sbjct: 39  FSVRGTPQQNGVAZRLNXTLLEKVRCMLSQSXLSKSFWXEAVNYACHIINRLPSAAXQGK 98

Query: 230 SPMEIWF--------W*GCQGL*LA*DIWVSNLLSRQGRKVES*NKAIFIGFKR-VKGYM 78
           +PME+W         +    G      +  + L  R         KAIF+GF   VKGY 
Sbjct: 99  TPMEVWXGKPSSDYDYIXIFGSPAYFHVTENXLDPRX-------KKAIFLGFSSGVKGYR 151

Query: 77  FWDDEDKKIILSRDVTFDKTSMMK 6
            W  E KK+++SRDVTFD+  M K
Sbjct: 152 LWCPEMKKLVISRDVTFDEEXMXK 175


>ref|XP_016540818.1| PREDICTED: uncharacterized protein LOC107841395 [Capsicum annuum]
          Length = 378

 Score = 69.7 bits (169), Expect(2) = 3e-15
 Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
 Frame = -2

Query: 407 FTVRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLR-LTYTSHLKNKLPSSALN*K 231
           FTVRKI Q NGV+ERMN +L+ KV C+L ++GL R F    +TY  HL N LPSSA+  K
Sbjct: 265 FTVRKIPQQNGVSERMNKSLVEKVRCMLSNAGLGRKFWAEAVTYAQHLINHLPSSAIGSK 324

Query: 230 SPMEIW 213
           +P+E+W
Sbjct: 325 TPLEVW 330



 Score = 39.3 bits (90), Expect(2) = 3e-15
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -3

Query: 232 RVPWRFGFGKAVKDYDLLRIFGCPTYYHVKDEKLNPRTRQYL 107
           + P     GK   DYD L +F    YYHV + KL+PR ++ L
Sbjct: 324 KTPLEVWSGKTATDYDTLHVFDSIAYYHVIESKLDPRAKKTL 365


>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
          Length = 1892

 Score = 77.8 bits (190), Expect = 6e-14
 Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 2/134 (1%)
 Frame = -2

Query: 404  TVRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLRLTYT-SHLKNKLPSSALN*KS 228
            TVR   Q NGV ERMN TLL K  C+LL + + ++F  +  +T SH+ N+ P+SA++ K+
Sbjct: 1156 TVRHTPQQNGVAERMNRTLLEKARCMLLQAKMSKVFWAKAVHTASHIVNRSPASAIDFKT 1215

Query: 227  PMEIWFW*GCQGL*LA*DIWVSNLLSRQGRKVES*NKAIFIGF-KRVKGYMFWDDEDKKI 51
            P E+W         L      +     +G+      KAIF+G+   VKGY  W     K 
Sbjct: 1216 PNEVWSGEPSNYSYLRIFGCPTYYHVNEGKLEPRSKKAIFVGYVDGVKGYKLWCLSLLKF 1275

Query: 50   ILSRDVTFDKTSMM 9
            ++SRDVTFD++S++
Sbjct: 1276 VVSRDVTFDESSIL 1289


>gb|KYP36391.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 498

 Score = 77.4 bits (189), Expect = 7e-14
 Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
 Frame = -2

Query: 404 TVRKILQ*NGVTERMNCTLL*KVWCLLLHSGL-KRLFGLRLTYTSHLKNKLPSSALN*KS 228
           TV    Q NG+ ERMN T+L +V C+LL SGL K+ +G   T  ++L N+ PSSALN K+
Sbjct: 166 TVPHTPQQNGLAERMNRTILERVRCMLLGSGLSKKFWGEAATTAAYLINRCPSSALNNKT 225

Query: 227 PMEIWFW*GCQGL*LA*DIWVSNLLSRQGRKVES*NKAIFIGF-KRVKGYMFWDDE--DK 57
           PME W         L     ++    ++G+      K +FIG+   VKGY  W  E    
Sbjct: 226 PMEAWHGKPVDYSNLRVFGSLAYAHVKEGKLEPRAVKCVFIGYPDGVKGYKLWKLEKGGG 285

Query: 56  KIILSRDVTFDKTSM 12
           K I+SRDVTFD+T +
Sbjct: 286 KCIISRDVTFDETKL 300


>gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 780

 Score = 77.4 bits (189), Expect = 8e-14
 Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
 Frame = -2

Query: 404 TVRKILQ*NGVTERMNCTLL*KVWCLLLHSGL-KRLFGLRLTYTSHLKNKLPSSALN*KS 228
           TV    Q NG+ ERMN T+L +V C+LL SGL K+ +G   T  ++L N+ PSSALN K+
Sbjct: 569 TVPHTPQQNGLAERMNRTILERVRCMLLGSGLSKKFWGEAATTAAYLINRCPSSALNNKT 628

Query: 227 PMEIWFW*GCQGL*LA*DIWVSNLLSRQGRKVES*NKAIFIGF-KRVKGYMFWDDE--DK 57
           PME W         L     ++    ++G+      K +FIG+   VKGY  W  E    
Sbjct: 629 PMEAWHGKPVDYSNLRVFGSLAYAHVKEGKLEPRAVKCVFIGYPDGVKGYKLWKLEKGGG 688

Query: 56  KIILSRDVTFDKTSM 12
           K I+SRDVTFD+T +
Sbjct: 689 KCIISRDVTFDETKL 703


>gb|OMO83367.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 785

 Score = 77.0 bits (188), Expect = 1e-13
 Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
 Frame = -2

Query: 404 TVRKILQ*NGVTERMNCTLL*KVWCLLLHSGL-KRLFGLRLTYTSHLKNKLPSSALN*KS 228
           TVR+  Q NGV ERMN TLL +  C+ L++GL K+ +   +  T++L N+ PS+A++ K+
Sbjct: 551 TVRRTPQQNGVAERMNQTLLQRARCIRLNAGLSKKFWAEAVNTTAYLVNRSPSTAIDLKT 610

Query: 227 PMEIWFW*GCQGL*LA*DIWVSNLLSRQGRKVES*NKAIFIGF-KRVKGYMFWDDEDKKI 51
           P ++W+        L      +      G+      K IF+G+   VKGY  W  +  K+
Sbjct: 611 PQDLWYDKPSDYSGLRIFGCPAYAHVNDGKLEPRAIKCIFLGYGTGVKGYRLWHFDSNKV 670

Query: 50  ILSRDVTFDKTSM 12
           I+SRDVTFD+++M
Sbjct: 671 IISRDVTFDESAM 683


>gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 507

 Score = 75.1 bits (183), Expect = 5e-13
 Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
 Frame = -2

Query: 407 FTVRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLR-LTYTSHLKNKLPSSALN*K 231
           +TVR   Q NGV ERMN TLL +  CLL ++GL R F    ++ T +L N+ PS+ ++ K
Sbjct: 195 YTVRNTPQQNGVAERMNRTLLERARCLLSNAGLSRSFWAEAVSTTCYLINRSPSTIIDCK 254

Query: 230 SPMEIWFW*GCQGL*LA*DIWVSNLLSRQGRKVES*NKAIFIGF-KRVKGYMFWDDEDKK 54
           +P+E+W         L      +     +G+      K +F+G+   VKGY  W   ++K
Sbjct: 255 TPIEVWSNKPANYSLLRVFGCNAYYHVNEGKLEPRSKKGLFMGYGDGVKGYRIWSPAERK 314

Query: 53  IILSRDVTFDKTSM 12
           +ILSRDV FD++ +
Sbjct: 315 VILSRDVIFDESHL 328


>gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 595

 Score = 74.3 bits (181), Expect = 9e-13
 Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
 Frame = -2

Query: 404 TVRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLRLTYTSHLKNKLPSSALN*KSP 225
           TVR   Q NGV ERMN TLL +  CLL ++     +G  +  T  L N+ PS+A++ K+P
Sbjct: 199 TVRNTPQQNGVAERMNKTLLERTRCLLSNAEGVTFWGEAVNTTCFLINRTPSTAISLKTP 258

Query: 224 MEIWFW*GCQGL*LA*DIWVSNLLSRQGRKVES*NKAIFIGF-KRVKGYMFWDDEDKKII 48
           +EIW         L      +     +G+ +    K +F+G+   VKGY  W   +KK+I
Sbjct: 259 IEIWTGKPTNYSNLRVFGCNAYYHVNEGKLLPRSRKCLFMGYGDGVKGYRIWSPSEKKVI 318

Query: 47  LSRDVTFDKTSM 12
           LSRDV FD++ +
Sbjct: 319 LSRDVIFDESHL 330


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
 Frame = -2

Query: 404  TVRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLRLTYTS-HLKNKLPSSALN*KS 228
            TVR+  Q NGV ERMN TLL +  C+  ++GL   F      T+ +L N+ PS+A+  K+
Sbjct: 1092 TVRRTPQQNGVAERMNRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSPSTAIELKT 1151

Query: 227  PMEIWFW*GCQGL*LA*DIWVSNLLSRQGRKVES*NKAIFIGF-KRVKGYMFW--DDEDK 57
            P E+W         L      +     +G+      K IF+G+ + VKGY  W  D    
Sbjct: 1152 PEEVWSGSPADYSGLRVFGCPAYAHVNEGKLKPRAKKCIFLGYGQGVKGYRLWCPDPVSS 1211

Query: 56   KIILSRDVTFDKTSMMKS 3
            K I+SRDVTFD++SM++S
Sbjct: 1212 KFIISRDVTFDESSMLRS 1229


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
 Frame = -2

Query: 404  TVRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLRLTYTS-HLKNKLPSSALN*KS 228
            TVR+  Q NGV ERMN TLL +  C+  ++GL   F      T+ +L N+ PS+A+  K+
Sbjct: 1071 TVRRTPQQNGVAERMNRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSPSTAIELKT 1130

Query: 227  PMEIWFW*GCQGL*LA*DIWVSNLLSRQGRKVES*NKAIFIGF-KRVKGYMFW--DDEDK 57
            P E+W         L      +     +G+      K IF+G+ + VKGY  W  D    
Sbjct: 1131 PEEVWSGSPADYSGLRVFGCPAYAHVNEGKLKPRAKKCIFLGYGQGVKGYRLWCPDPVSS 1190

Query: 56   KIILSRDVTFDKTSMMKS 3
            K I+SRDVTFD++SM++S
Sbjct: 1191 KFIISRDVTFDESSMLRS 1208


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 72.0 bits (175), Expect = 6e-12
 Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
 Frame = -2

Query: 404 TVRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLRLTYTS-HLKNKLPSSALN*KS 228
           TVR   Q NG+ ERMN T+L +V C+L  SGL ++F      T+ HL N+ PSSAL  K+
Sbjct: 543 TVRYTPQQNGLAERMNRTILERVRCMLSSSGLSKVFWAEAAETAVHLINRSPSSALQFKT 602

Query: 227 PMEIWFW*GCQGL*LA*DIWVSNLLSRQGRKVES*NKAIFIGF-KRVKGYMFWDDED--K 57
           P E W         L      + + ++  +      K IF+G+ K VKGY  W +     
Sbjct: 603 PQEKWTGKAADYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIETQGKG 662

Query: 56  KIILSRDVTFDKTSMMK 6
           K I+SRDVTF++  M K
Sbjct: 663 KCIISRDVTFNEQDMSK 679


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 72.0 bits (175), Expect = 6e-12
 Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
 Frame = -2

Query: 404 TVRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLRLTYTS-HLKNKLPSSALN*KS 228
           TVR   Q NGV ERMN TLL +  C+L ++GL R F      T+ +L N+ P + +  K+
Sbjct: 563 TVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKT 622

Query: 227 PMEIWFW*GCQGL*LA*DIWVSNLLSRQGRKVES*NKAIFIGF-KRVKGYMFWDDEDKKI 51
           PME+W         L      +     +G+      K +F+G+   VKG+  W   +K++
Sbjct: 623 PMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEKRV 682

Query: 50  ILSRDVTFDKTSMMKS 3
           I+SR+V FD++ ++++
Sbjct: 683 IMSRNVVFDESPLLRT 698


>gb|KYP64656.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 149

 Score = 68.6 bits (166), Expect = 6e-12
 Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
 Frame = -2

Query: 362 MNCTLL*KVWCLLLHSGL-KRLFGLRLTYTSHLKNKLPSSALN*KSPMEIWFW*GCQGL* 186
           MN T+L +V C+LL SGL K+ +G   T  ++L NK PSSALN K+PME W         
Sbjct: 1   MNRTILERVRCMLLGSGLSKKFWGEAATTAAYLINKCPSSALNHKTPMEAWHGKPVDYSN 60

Query: 185 LA*DIWVSNLLSRQGRKVES*NKAIFIGF-KRVKGYMFWDDE--DKKIILSRDVTFDKTS 15
           L     ++    ++G+      K +FIG+   VKGY  W  E    K I+SRDVTFD+T 
Sbjct: 61  LRVFGSLAYAHVKEGKLEPRAVKCVFIGYPDGVKGYKLWKLEKGGGKCIISRDVTFDETK 120

Query: 14  M 12
           +
Sbjct: 121 L 121


>gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 448

 Score = 56.6 bits (135), Expect(2) = 7e-12
 Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
 Frame = -2

Query: 407 FTVRKILQ*NGVTERMNCTLL*KVWCLLLHSGLKRLFGLR-LTYTSHLKNKLPSSALN*K 231
           +TVR   Q NGV ERMN TLL +  CLL ++GL R F    ++ T +L N+ PS+ ++ K
Sbjct: 336 YTVRNTPQQNGVAERMNKTLLERARCLLSNAGLSRSFWAEAISTTCYLINRSPSTVIDCK 395

Query: 230 SPMEIW 213
           +P+E+W
Sbjct: 396 TPIEVW 401



 Score = 41.2 bits (95), Expect(2) = 7e-12
 Identities = 16/29 (55%), Positives = 22/29 (75%)
 Frame = -3

Query: 193 DYDLLRIFGCPTYYHVKDEKLNPRTRQYL 107
           +Y LLR+FGC  YYHV + KL PR+++ L
Sbjct: 407 NYSLLRVFGCNAYYHVNEGKLEPRSKKGL 435