BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00033343
         (357 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_016457574.1| PREDICTED: uncharacterized mitochondrial pro...    84   1e-24
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...    84   4e-24
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...    84   4e-24
gb|PHT98255.1| hypothetical protein BC332_32847 [Capsicum chinense]    82   7e-23
gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo...    77   6e-22
emb|CAN68884.1| hypothetical protein VITISV_039230 [Vitis vinifera]    77   6e-22
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo...    77   8e-22
ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766...    70   1e-21
gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo...    74   4e-21
gb|KYP72919.1| Retrovirus-related Pol polyprotein from transposo...    84   5e-21
gb|KYP40581.1| Retrovirus-related Pol polyprotein from transposo...    74   5e-21
ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116...    73   5e-21
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    74   7e-21
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...    71   8e-21
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...    71   8e-21
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...    74   8e-21
gb|AAC12735.1| putative retrovirus-related polyprotein, partial ...    72   1e-20
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo...    69   2e-20
ref|XP_014631008.1| PREDICTED: uncharacterized mitochondrial pro...    73   2e-20
gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposo...    74   3e-20

>ref|XP_016457574.1| PREDICTED: uncharacterized mitochondrial protein AtMg00300-like
           [Nicotiana tabacum]
          Length = 202

 Score = 84.3 bits (207), Expect(2) = 1e-24
 Identities = 37/64 (57%), Positives = 48/64 (75%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
           MGNN+ C IVGIGS+ +R HDG  RT+T VRHVPDLKKNL+SL  L+ QG ++  E G +
Sbjct: 20  MGNNATCAIVGIGSVRVRCHDGVVRTITQVRHVPDLKKNLISLSTLDEQGYRYMSEAGTI 79

Query: 182 TVSR 193
            V++
Sbjct: 80  KVTK 83



 Score = 56.6 bits (135), Expect(2) = 1e-24
 Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 201 VLKGERTRNLYRLVGSVIVGDVSAAAEKVEDD--TRLWHMRLGHMSEKGLQVL 353
           +LKG+    LY L GS IVG  +A+  ++ +D   RLWHMRLGHMS +GL++L
Sbjct: 88  MLKGKLENGLYTLAGSTIVGSANASTVQLSNDDKARLWHMRLGHMSARGLEML 140


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1032

 Score = 84.3 bits (207), Expect(2) = 4e-24
 Identities = 37/64 (57%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
           MGN++ C+I GIG+I I++HDGT +TL+ VR +PDLK+NL+SLG LE+ GCK+S E G +
Sbjct: 21  MGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVL 80

Query: 182 TVSR 193
            VS+
Sbjct: 81  KVSK 84



 Score = 54.7 bits (130), Expect(2) = 4e-24
 Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
 Frame = +3

Query: 201 VLKGERTRNLYRLVGSVIVGDVSAAAEKVEDD-TRLWHMRLGHMSEKGLQVL 353
           +LK  R  +LY L GS++ G  + ++   + D T+LWHMRLGHMSEKG+ +L
Sbjct: 89  LLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLL 140


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score = 84.3 bits (207), Expect(2) = 4e-24
 Identities = 37/64 (57%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
           MGN++ C+I GIG+I I++HDGT +TL+ VR +PDLK+NL+SLG LE+ GCK+S E G +
Sbjct: 317 MGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVL 376

Query: 182 TVSR 193
            VS+
Sbjct: 377 KVSK 380



 Score = 54.7 bits (130), Expect(2) = 4e-24
 Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
 Frame = +3

Query: 201 VLKGERTRNLYRLVGSVIVGDVSAAAEKVEDD-TRLWHMRLGHMSEKGLQVL 353
           +LK  R  +LY L GS++ G  + ++   + D T+LWHMRLGHMSEKG+ +L
Sbjct: 385 LLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLL 436


>gb|PHT98255.1| hypothetical protein BC332_32847 [Capsicum chinense]
          Length = 1351

 Score = 81.6 bits (200), Expect(2) = 7e-23
 Identities = 38/63 (60%), Positives = 49/63 (77%)
 Frame = +2

Query: 2    MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
            MGNN+  ++ G G+I IR HDG  RTLT VR+VPDLKKNL+SLG +E+ GCK++GE G +
Sbjct: 1056 MGNNTPYKVFGKGTIRIRMHDGVVRTLTDVRYVPDLKKNLISLGTVESLGCKYTGEGGVL 1115

Query: 182  TVS 190
             VS
Sbjct: 1116 KVS 1118



 Score = 53.1 bits (126), Expect(2) = 7e-23
 Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = +3

Query: 201  VLKGERTRNLYRLVGSVIVGDVSAAAEKVEDD--TRLWHMRLGHMSEKGLQVL 353
            ++K  ++  LY L+GS + G V+ +     D   T+LWHMRLGHMSEKGL  L
Sbjct: 1124 IMKAHKSGTLYNLLGSTVTGVVAVSTSNQLDPNITKLWHMRLGHMSEKGLSFL 1176


>gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 448

 Score = 76.6 bits (187), Expect(2) = 6e-22
 Identities = 35/64 (54%), Positives = 49/64 (76%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
           MGN+  C+ VGIG+I +R HDG  RTLT VRHVPDLKKNL+S+G L+++G K + ++G +
Sbjct: 83  MGNDMPCKTVGIGTIQLRMHDGVIRTLTEVRHVPDLKKNLISVGVLDSKGFKCNVKNGVM 142

Query: 182 TVSR 193
            + R
Sbjct: 143 EIKR 146



 Score = 55.1 bits (131), Expect(2) = 6e-22
 Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +3

Query: 195 TTVLKGERTRNLYRLVGSV--IVGDVSAAAEKVEDDTRLWHMRLGHMSEKGLQVL 353
           T V++G +  NLY L GS   I   VS A + + D T LWHMRLGHMSE+G+ +L
Sbjct: 149 TVVMRGFKKGNLYMLQGSTSSISESVSVAEKNIPDLTYLWHMRLGHMSERGMMIL 203


>emb|CAN68884.1| hypothetical protein VITISV_039230 [Vitis vinifera]
          Length = 220

 Score = 77.4 bits (189), Expect(2) = 6e-22
 Identities = 34/64 (53%), Positives = 47/64 (73%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
           MGN+  C++VGI +I I+ +DG  RTLT VRHVP LKKNL+SLG L++ GC +  E G +
Sbjct: 99  MGNDEACKVVGIDTIRIKMYDGFIRTLTDVRHVPKLKKNLISLGTLDSNGCTYKAEGGVL 158

Query: 182 TVSR 193
            +S+
Sbjct: 159 RISK 162



 Score = 54.3 bits (129), Expect(2) = 6e-22
 Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
 Frame = +3

Query: 201 VLKGERTRNLYRLVGSVIVGDVSAAAEK-VEDDTRLWHMRLGHMSEKGLQVL 353
           V+KG++   LY L GS ++G V  +  K + + TRL+H+RLGHMSEKGL +L
Sbjct: 167 VMKGKKINGLYTLKGSTVIGVVVVSTSKSIIETTRLFHIRLGHMSEKGLTIL 218


>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 609

 Score = 76.6 bits (187), Expect(2) = 8e-22
 Identities = 35/64 (54%), Positives = 47/64 (73%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
           MGN+  C+ +GIG+I I+ HDG  RTLT VRHVPDLKKNL+S+G L  +G K + E G +
Sbjct: 244 MGNDMACKTIGIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVGVLHTKGFKCNVEGGVM 303

Query: 182 TVSR 193
            +S+
Sbjct: 304 EISK 307



 Score = 54.7 bits (130), Expect(2) = 8e-22
 Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +3

Query: 195 TTVLKGERTRNLYRLVGS--VIVGDVSAAAEKVEDDTRLWHMRLGHMSEKGLQVL 353
           T V++G +  NLY L GS  +I   VS A +   D T LWHMRLGHMSE+G+ VL
Sbjct: 310 TVVIRGIKKGNLYMLQGSTNLISESVSVADKHTPDLTHLWHMRLGHMSERGMMVL 364


>ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766925 [Gossypium
           raimondii]
          Length = 217

 Score = 69.7 bits (169), Expect(2) = 1e-21
 Identities = 30/62 (48%), Positives = 46/62 (74%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
           MGN+S C+ +G+G+I +++HDG  + LT VR++P LKKNL+SLG LE++G   +  DG +
Sbjct: 38  MGNDSACKTMGVGTIQLKNHDGLIQVLTDVRYIPSLKKNLISLGVLESKGLTITLRDGLL 97

Query: 182 TV 187
            V
Sbjct: 98  KV 99



 Score = 61.2 bits (147), Expect(2) = 1e-21
 Identities = 32/54 (59%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
 Frame = +3

Query: 198 TVLKGERTRNLYRLVGSVIVGDVSAAAEKVEDD--TRLWHMRLGHMSEKGLQVL 353
           TV+KG R  NLY L GS I+G  S A+ K  D   TRLWHMRLGH  EK LQ L
Sbjct: 105 TVMKGTRRNNLYYLNGSTIIGSTSTASTKDADSEATRLWHMRLGHAGEKALQSL 158


>gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 593

 Score = 73.9 bits (180), Expect(2) = 4e-21
 Identities = 33/64 (51%), Positives = 47/64 (73%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
           MGN+  C+ + IG+I I+ HDG  RTLT VRHVPDLKKNL+S+G L+ +G K + E G +
Sbjct: 296 MGNDMACKTISIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVGVLDTKGFKCNVEGGVM 355

Query: 182 TVSR 193
            +++
Sbjct: 356 EINK 359



 Score = 55.1 bits (131), Expect(2) = 4e-21
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
 Frame = +3

Query: 195 TTVLKGERTRNLYRLVGS--VIVGDVSAAAEKVEDDTRLWHMRLGHMSEKGLQVL 353
           T V++G +  NLY L GS  +I   +S A +   D TRLWHMRLGHMSE+G+ VL
Sbjct: 362 TIVIRGIKKGNLYMLQGSTNLISESISVADKHTLDLTRLWHMRLGHMSERGMMVL 416


>gb|KYP72919.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 865

 Score = 84.3 bits (207), Expect(2) = 5e-21
 Identities = 37/64 (57%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
           MGN++ C+I GIG+I I++HDGT +TL+ VR +PDLK+NL+SLG LE+ GCK+S E G +
Sbjct: 21  MGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVL 80

Query: 182 TVSR 193
            VS+
Sbjct: 81  KVSK 84



 Score = 44.3 bits (103), Expect(2) = 5e-21
 Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
 Frame = +3

Query: 201 VLKGERTRNLYRLVGSVIVGDVSAAAEKVEDD-TRLWHMRLGHM 329
           +LK  R  +LY L GS++ G  + ++   + D T+LWHMRLGHM
Sbjct: 89  LLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHM 132


>gb|KYP40581.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 218

 Score = 74.3 bits (181), Expect(2) = 5e-21
 Identities = 34/64 (53%), Positives = 48/64 (75%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
           MGN+  C+IVGIG+I +R HDG  RTLT VRHVPDLK NL+S+G L+++  K + ++G +
Sbjct: 1   MGNDMPCKIVGIGTIQLRMHDGVIRTLTEVRHVPDLKNNLISVGVLDSKSFKCNVKNGVM 60

Query: 182 TVSR 193
            + R
Sbjct: 61  EIKR 64



 Score = 54.3 bits (129), Expect(2) = 5e-21
 Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +3

Query: 195 TTVLKGERTRNLYRLVGSV--IVGDVSAAAEKVEDDTRLWHMRLGHMSEKGLQVL 353
           T V++G +  NLY L GS   I   +S A + + D T LWHMRLGHMSE+G+ +L
Sbjct: 67  TLVMRGFKKGNLYMLQGSTSSISESISVAEKNIPDLTYLWHMRLGHMSERGMMIL 121


>ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116374, partial [Tarenaya
           hassleriana]
          Length = 209

 Score = 72.8 bits (177), Expect(2) = 5e-21
 Identities = 36/62 (58%), Positives = 45/62 (72%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
           MGNN   +  GIGSI +R HDGTTR LT VR+VP+LKKNL+SLG LE++G   +  DG +
Sbjct: 29  MGNNDALQATGIGSIRLRCHDGTTRILTEVRYVPNLKKNLISLGTLESKGYTVTIRDGIL 88

Query: 182 TV 187
            V
Sbjct: 89  KV 90



 Score = 55.8 bits (133), Expect(2) = 5e-21
 Identities = 29/53 (54%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = +3

Query: 201 VLKGERTRNLYRLVGSVIVGDVSAAAEKVEDD--TRLWHMRLGHMSEKGLQVL 353
           VLKG R  NLY   GS ++G V+  A + +D   TRLWHMRLGH  EK LQ L
Sbjct: 97  VLKGVRKNNLYYFKGSTVIGTVAVTAGEDKDSEVTRLWHMRLGHPGEKALQNL 149


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 74.3 bits (181), Expect(2) = 7e-21
 Identities = 35/58 (60%), Positives = 46/58 (79%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDG 175
           MGN++ C+ VGIGSI +R+HDG+TR L  VR+VP LKKNL+SLGALE++G   +  DG
Sbjct: 255 MGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDG 312



 Score = 53.9 bits (128), Expect(2) = 7e-21
 Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
 Frame = +3

Query: 201 VLKGERTRNLYRLVGSVIVGDVSAAAEKVEDD---TRLWHMRLGHMSEKGLQV 350
           +LKG    NLY   GS +VG V+AA    + D   T+LWHMRLGH  EK LQ+
Sbjct: 323 MLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEATKLWHMRLGHAGEKSLQI 375


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score = 71.2 bits (173), Expect(2) = 8e-21
 Identities = 30/62 (48%), Positives = 46/62 (74%)
 Frame = +2

Query: 2    MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
            MGN+  C+++GIG++ I+  DG  RTLT VRH+P++KKNL+SL  L+ +G ++S E G +
Sbjct: 817  MGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLDKKGFRYSAEGGVL 876

Query: 182  TV 187
             V
Sbjct: 877  KV 878



 Score = 56.6 bits (135), Expect(2) = 8e-21
 Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
 Frame = +3

Query: 198  TVLKGERTRNLYRLVGSVIVG--DVSAAAEKVEDDTRLWHMRLGHMSEKGLQVL 353
            TV++G   R LY L GS + G   VS++ +   D T+LWHMRLGHMSE+GL VL
Sbjct: 884  TVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVL 937


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score = 71.2 bits (173), Expect(2) = 8e-21
 Identities = 30/62 (48%), Positives = 46/62 (74%)
 Frame = +2

Query: 2    MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
            MGN+  C+++GIG++ I+  DG  RTLT VRH+P++KKNL+SL  L+ +G ++S E G +
Sbjct: 838  MGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLDKKGFRYSAEGGVL 897

Query: 182  TV 187
             V
Sbjct: 898  KV 899



 Score = 56.6 bits (135), Expect(2) = 8e-21
 Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
 Frame = +3

Query: 198  TVLKGERTRNLYRLVGSVIVG--DVSAAAEKVEDDTRLWHMRLGHMSEKGLQVL 353
            TV++G   R LY L GS + G   VS++ +   D T+LWHMRLGHMSE+GL VL
Sbjct: 905  TVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVL 958


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score = 74.3 bits (181), Expect(2) = 8e-21
 Identities = 35/58 (60%), Positives = 46/58 (79%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDG 175
           MGN++ C+ VGIGSI +R+HDG+TR L  VR+VP LKKNL+SLGALE++G   +  DG
Sbjct: 254 MGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDG 311



 Score = 53.5 bits (127), Expect(2) = 8e-21
 Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
 Frame = +3

Query: 201 VLKGERTRNLYRLVGSVIVGDVSAAAEKVEDDT---RLWHMRLGHMSEKGLQVL 353
           +LKG    NLY   GS +VG V+AA    + D    +LWHMRLGH  EK LQ+L
Sbjct: 322 MLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEAAKLWHMRLGHAGEKSLQIL 375


>gb|AAC12735.1| putative retrovirus-related polyprotein, partial [Lithospermum
           erythrorhizon]
          Length = 244

 Score = 72.0 bits (175), Expect(2) = 1e-20
 Identities = 34/64 (53%), Positives = 43/64 (67%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
           MGN+  C+ VG+G+I ++ HDGT  TL  VRH+ DL KNL+SL  LE  GCK   EDG +
Sbjct: 5   MGNDHACKTVGVGTIRVKMHDGTIITLNDVRHIQDLHKNLISLRLLEKNGCKIVLEDGVL 64

Query: 182 TVSR 193
            V R
Sbjct: 65  KVVR 68



 Score = 55.5 bits (132), Expect(2) = 1e-20
 Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
 Frame = +3

Query: 201 VLKGERTRNLYRLVGSVIVGDVSAAAEKVEDDTR---LWHMRLGHMSEKGLQVL 353
           V+KG    NLY LVG+++ GD++      +D T    +WHMRLGHMSEKGL +L
Sbjct: 73  VMKGVSHGNLYPLVGTMVTGDLAVGVVGHKDQTECTMIWHMRLGHMSEKGLSLL 126


>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Capsicum baccatum]
          Length = 1526

 Score = 68.6 bits (166), Expect(2) = 2e-20
 Identities = 30/46 (65%), Positives = 38/46 (82%)
 Frame = +2

Query: 56  SHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNVTVSR 193
           +HDG  RTLT VRHVPDLK+NL+SLG LE+QGC++S E G + VS+
Sbjct: 65  THDGVIRTLTSVRHVPDLKRNLISLGTLESQGCRYSAEGGVLKVSK 110



 Score = 57.8 bits (138), Expect(2) = 2e-20
 Identities = 26/51 (50%), Positives = 39/51 (76%)
 Frame = +3

Query: 201 VLKGERTRNLYRLVGSVIVGDVSAAAEKVEDDTRLWHMRLGHMSEKGLQVL 353
           +LK  R+ +LY L GS ++G  + A+   +D+T+LWH+RLGHMSEKG+Q+L
Sbjct: 115 LLKAIRSGSLYLLQGSTVIGSETIASSN-KDNTKLWHLRLGHMSEKGIQIL 164


>ref|XP_014631008.1| PREDICTED: uncharacterized mitochondrial protein AtMg00300-like
           [Glycine max]
          Length = 180

 Score = 73.2 bits (178), Expect(2) = 2e-20
 Identities = 32/64 (50%), Positives = 48/64 (75%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
           MGN+  C+ +GIG+I I+ HDG  +TLT VRHVP+LKKNL+S+G ++ +G K S E+G +
Sbjct: 1   MGNDVTCKTIGIGTIKIKMHDGIIQTLTEVRHVPELKKNLISIGIVDGKGFKCSTENGVM 60

Query: 182 TVSR 193
            + +
Sbjct: 61  KIQK 64



 Score = 53.1 bits (126), Expect(2) = 2e-20
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
 Frame = +3

Query: 180 LQFQETTVLKGERTRNLYRLVGSVIVGD-----VSAAAEKVEDDTRLWHMRLGHMSEKGL 344
           +Q     V+KG +  NLY L G+  + D      S + + + D T+LWHMRLGHMSEKG+
Sbjct: 62  IQKGSAMVMKGIKRGNLYILQGTTCIDDGLVVVASRSNKSIPDLTQLWHMRLGHMSEKGM 121

Query: 345 QVL 353
            +L
Sbjct: 122 MIL 124


>gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 993

 Score = 74.3 bits (181), Expect(2) = 3e-20
 Identities = 34/64 (53%), Positives = 44/64 (68%)
 Frame = +2

Query: 2   MGNNSVCRIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEDGNV 181
           +GNN  C +VGIGSI ++ HDG  R L  VRHVPDLK+NL+SLG L+  G  F  E G +
Sbjct: 260 LGNNKACDVVGIGSIAVKMHDGHVRILKDVRHVPDLKRNLISLGTLDDSGYIFRSERGLL 319

Query: 182 TVSR 193
            +S+
Sbjct: 320 RISK 323



 Score = 51.6 bits (122), Expect(2) = 3e-20
 Identities = 21/48 (43%), Positives = 33/48 (68%)
 Frame = +3

Query: 201 VLKGERTRNLYRLVGSVIVGDVSAAAEKVEDDTRLWHMRLGHMSEKGL 344
           ++KG +   LY L G+ +VG+    A++  D T+LWH RLGH+S++GL
Sbjct: 328 IMKGIKRNGLYVLQGATLVGETHVTAKQNLDKTKLWHQRLGHLSDRGL 375