BLASTX nr result

ID: Ophiopogon27_contig00033204 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00033204
         (398 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020269839.1| U-box domain-containing protein 45-like [Asp...    62   2e-08
ref|XP_010250775.1| PREDICTED: U-box domain-containing protein 4...    58   4e-07
ref|XP_008801187.1| PREDICTED: U-box domain-containing protein 4...    55   3e-06

>ref|XP_020269839.1| U-box domain-containing protein 45-like [Asparagus officinalis]
          Length = 767

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 34/62 (54%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
 Frame = -3

Query: 396 NGTARGKEKSQKLLKLFRDQRXXXXXXXXXXXXXQRDVRTELVPETKP-VYKSKSRRLGK 220
           NGT RGKEK+QKLLKLFR+QR             +R+   E V E+KP VY+S++RRLGK
Sbjct: 693 NGTTRGKEKAQKLLKLFREQRQKEQPQVIQLETAEREESEETVMESKPGVYRSRTRRLGK 752

Query: 219 TI 214
           TI
Sbjct: 753 TI 754


>ref|XP_010250775.1| PREDICTED: U-box domain-containing protein 45-like [Nelumbo
           nucifera]
          Length = 767

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 30/61 (49%), Positives = 38/61 (62%)
 Frame = -3

Query: 396 NGTARGKEKSQKLLKLFRDQRXXXXXXXXXXXXXQRDVRTELVPETKPVYKSKSRRLGKT 217
           NGTARGKEKSQKLL LFR+QR               +  T   PE+KP+YKS S+R+G+ 
Sbjct: 693 NGTARGKEKSQKLLMLFREQRQREASPVQTQPQPDGNGVTPPAPESKPLYKSTSKRMGRA 752

Query: 216 I 214
           +
Sbjct: 753 L 753


>ref|XP_008801187.1| PREDICTED: U-box domain-containing protein 45-like [Phoenix
           dactylifera]
 ref|XP_008801188.1| PREDICTED: U-box domain-containing protein 45-like [Phoenix
           dactylifera]
 ref|XP_008801189.1| PREDICTED: U-box domain-containing protein 45-like [Phoenix
           dactylifera]
          Length = 770

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 30/61 (49%), Positives = 39/61 (63%)
 Frame = -3

Query: 396 NGTARGKEKSQKLLKLFRDQRXXXXXXXXXXXXXQRDVRTELVPETKPVYKSKSRRLGKT 217
           +GTARGKEK+QKLLKLFR+QR             +R      V E+KP  KS+S+RLG+T
Sbjct: 696 SGTARGKEKAQKLLKLFREQRQREPSPVRQQQLVERSAGKGGVMESKPSCKSRSKRLGRT 755

Query: 216 I 214
           +
Sbjct: 756 L 756


Top