BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00033001
         (711 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]     60   7e-07
gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officin...    51   3e-06

>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 32/107 (29%), Positives = 55/107 (51%)
 Frame = +3

Query: 207 NSDSFDTEFSSGLKSLFIEPEGFYQHTRTQTGAAIPLDYRRLASVSXXXXXXGHXXXXXX 386
           +SD  +   S  ++ +  E EG Y+HTR++TGA  P++Y++LA          H      
Sbjct: 355 SSDESERSHSPTVREICDEFEGVYRHTRSRTGAIRPVNYQKLA--QGITTSDEHSAIAES 412

Query: 387 XXXXXVQGEQTGAYMAGIPEDVARKLEGHQATIAMQQGTIEAIKRML 527
                +  ++   YM G PED+A++++ H   +  QQ T+  +K ML
Sbjct: 413 QSSSSIGAQKVSVYMTGNPEDIAKRVDEHHVMLQAQQETLLQVKDML 459


>gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officinalis]
          Length = 869

 Score = 51.2 bits (121), Expect(3) = 3e-06
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
 Frame = +3

Query: 198 KTKNSDSFDTEFSSG--LKSLFIEPEGFYQHTRTQTGAAIPLDYRRLASVSXXXXXXGHX 371
           K  ++DS +++ S    ++ +  + EG YQ+TRT+TGA  P++Y++LA          H 
Sbjct: 408 KASHTDSDESQESHPPTVREICDQFEGVYQNTRTRTGAIRPVNYQKLA--KRITTSDEHS 465

Query: 372 XXXXXXXXXXVQGEQTGAYMAGIPEDVARKLEGHQATIAMQQGTIEAIKRML 527
                     V   +  AY  G  ED+ ++++ H   +  QQ T+  +K ML
Sbjct: 466 AIAESQSSSSVGAREVSAYTTGNHEDITKRVDEHHVMLQAQQETLLQLKDML 517



 Score = 24.3 bits (51), Expect(3) = 3e-06
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 1   CHCQRLANVILDGCQC 48
           C C+RL + +L  C C
Sbjct: 346 CQCERLISAVLSECPC 361



 Score = 23.1 bits (48), Expect(3) = 3e-06
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 110 PRRTCNRVRRQAPEDLDLPVATVNMIGKSK 199
           P +   R R++  E  + P  T+NMIG+ K
Sbjct: 380 PAKRQRRCRKKTAE-AEYPQVTINMIGQGK 408