BLASTX nr result

ID: Ophiopogon27_contig00032988 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00032988
         (413 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008799465.1| PREDICTED: serrate RNA effector molecule [Ph...    47   4e-06

>ref|XP_008799465.1| PREDICTED: serrate RNA effector molecule [Phoenix dactylifera]
 ref|XP_008799466.1| PREDICTED: serrate RNA effector molecule [Phoenix dactylifera]
          Length = 747

 Score = 47.0 bits (110), Expect(2) = 4e-06
 Identities = 21/36 (58%), Positives = 30/36 (83%)
 Frame = -1

Query: 263 RYVSSH*ITTVERRKERARATAQEFLLDLKNGVLDL 156
           +Y  ++ +T +ERR ERAR+TA+EFLLDL++G LDL
Sbjct: 253 KYHPTNLVTVIERRNERARSTAKEFLLDLQSGTLDL 288



 Score = 31.2 bits (69), Expect(2) = 4e-06
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -2

Query: 289 TQKDE*WLQDMYHPTKL 239
           T KDE WL+D YHPT L
Sbjct: 243 THKDEEWLKDKYHPTNL 259


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