BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00032785
         (359 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020170814.1| polyadenylation and cleavage factor homolog ...    89   2e-19
ref|XP_021719658.1| polyadenylation and cleavage factor homolog ...    91   8e-19
ref|XP_021766922.1| polyadenylation and cleavage factor homolog ...    91   8e-19
ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage fact...    91   8e-19
ref|XP_015938301.1| polyadenylation and cleavage factor homolog ...    86   1e-18
ref|XP_016173485.1| polyadenylation and cleavage factor homolog ...    86   1e-18
ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    85   2e-18
gb|PPS20316.1| hypothetical protein GOBAR_AA00250 [Gossypium bar...    88   7e-18
ref|XP_016683609.1| PREDICTED: polyadenylation and cleavage fact...    88   7e-18
ref|XP_016683608.1| PREDICTED: polyadenylation and cleavage fact...    88   7e-18
gb|PPD72215.1| hypothetical protein GOBAR_DD30889 [Gossypium bar...    88   7e-18
ref|XP_020269462.1| LOW QUALITY PROTEIN: uncharacterized protein...    83   8e-18
ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    84   8e-18
gb|ONK65902.1| uncharacterized protein A4U43_C06F2150 [Asparagus...    83   8e-18
gb|KJB67157.1| hypothetical protein B456_010G178200 [Gossypium r...    88   1e-17
ref|XP_022036926.1| polyadenylation and cleavage factor homolog ...    88   1e-17
gb|KJB67159.1| hypothetical protein B456_010G178200 [Gossypium r...    88   1e-17
ref|XP_017645983.1| PREDICTED: polyadenylation and cleavage fact...    88   1e-17
ref|XP_012450329.1| PREDICTED: polyadenylation and cleavage fact...    88   1e-17
gb|OMO76739.1| hypothetical protein CCACVL1_15454 [Corchorus cap...    88   1e-17

>ref|XP_020170814.1| polyadenylation and cleavage factor homolog 4 [Aegilops tauschii
           subsp. tauschii]
          Length = 932

 Score = 88.6 bits (218), Expect(2) = 2e-19
 Identities = 44/82 (53%), Positives = 55/82 (67%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI+EVPVEQKLPS YLLDSI+KN+G +Y   FA RL  +F   Y+++ P   PAM HLFR
Sbjct: 79  RILEVPVEQKLPSLYLLDSIVKNIGQEYVEDFATRLQKVFCFAYREVHPKQHPAMRHLFR 138

Query: 182 TWGKYIPSFARDSIQEFLQKEP 247
           TW +  PS     I++ LQ  P
Sbjct: 139 TWSQVFPSSVLQGIEDELQFSP 160



 Score = 34.7 bits (78), Expect(2) = 2e-19
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 240 KNHTPASSGDLRHSGSQSPHLLRG-HVNAKYLEAHHQMEH 356
           +N  PA++   R S S SP    G HVN KYLEA HQ+++
Sbjct: 162 ENKRPATTTIPRQSESLSPRPSHGIHVNPKYLEAQHQLKN 201


>ref|XP_021719658.1| polyadenylation and cleavage factor homolog 4-like [Chenopodium
           quinoa]
          Length = 938

 Score = 90.9 bits (224), Expect = 8e-19
 Identities = 41/82 (50%), Positives = 57/82 (69%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           R++EVPV+QK+PS YLLDSI+KN+G +Y  +FA RL  +F + Y+++ P L P+M HLFR
Sbjct: 94  RVLEVPVDQKMPSLYLLDSIVKNIGREYARHFASRLPEVFCEVYRQVPPNLYPSMRHLFR 153

Query: 182 TWGKYIPSFARDSIQEFLQKEP 247
           TW    PS     I++ LQ  P
Sbjct: 154 TWSTVFPSLVLSMIEDELQFSP 175


>ref|XP_021766922.1| polyadenylation and cleavage factor homolog 4-like [Chenopodium
           quinoa]
          Length = 939

 Score = 90.9 bits (224), Expect = 8e-19
 Identities = 41/82 (50%), Positives = 58/82 (70%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           R++EVPV+QK+PS YLLDSI+KN+G +Y  +FA RL  +F + Y+++ P L P+M HLFR
Sbjct: 94  RVLEVPVDQKMPSLYLLDSIVKNIGREYARHFASRLPEVFCEVYRQVPPNLYPSMRHLFR 153

Query: 182 TWGKYIPSFARDSIQEFLQKEP 247
           TW    PS    +I++ LQ  P
Sbjct: 154 TWSTVFPSSVLSTIEDELQFSP 175


>ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Nelumbo nucifera]
          Length = 1071

 Score = 90.9 bits (224), Expect = 8e-19
 Identities = 50/108 (46%), Positives = 64/108 (59%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI+EVPVEQKLPS YLLDSI+KN+G +Y  YFA RL  +F + Y+++ P L PAM HLF 
Sbjct: 123 RIIEVPVEQKLPSLYLLDSIVKNIGREYARYFASRLPEVFCEAYRQVQPNLYPAMRHLFG 182

Query: 182 TWGKYIPSFARDSIQEFLQKEPYTSIFRGFETFWISISTSITWPCQCE 325
           TW    P+     I+  LQ  P ++            STS+T P   E
Sbjct: 183 TWSTVFPTKVLRKIEVELQFSPASN----------QQSTSLTAPRSSE 220


>ref|XP_015938301.1| polyadenylation and cleavage factor homolog 4-like [Arachis
           duranensis]
          Length = 179

 Score = 86.3 bits (212), Expect = 1e-18
 Identities = 43/85 (50%), Positives = 56/85 (65%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI++VP EQKLPS YLLDSI+KN G++Y  YFA RL  +F + Y+++ P L PAM HLF 
Sbjct: 87  RILKVPAEQKLPSLYLLDSIVKNFGEEYVEYFALRLPEVFCEAYRQVQPHLHPAMHHLFG 146

Query: 182 TWGKYIPSFARDSIQEFLQKEPYTS 256
           TW +  P  A   I+  LQ    T+
Sbjct: 147 TWSEVFPPSALRKIEAELQLSQVTA 171


>ref|XP_016173485.1| polyadenylation and cleavage factor homolog 4 [Arachis ipaensis]
          Length = 179

 Score = 85.9 bits (211), Expect = 1e-18
 Identities = 43/85 (50%), Positives = 56/85 (65%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI++VP EQKLPS YLLDSI+KN G++Y  YFA RL  +F + Y+++ P L PAM HLF 
Sbjct: 87  RILKVPAEQKLPSLYLLDSIVKNFGEEYVGYFALRLPEVFCEAYRQVQPHLHPAMRHLFG 146

Query: 182 TWGKYIPSFARDSIQEFLQKEPYTS 256
           TW +  P  A   I+  LQ    T+
Sbjct: 147 TWSEVFPPSALRKIEAELQLSQVTA 171


>ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
           homolog 4 [Elaeis guineensis]
          Length = 1070

 Score = 85.1 bits (209), Expect(2) = 2e-18
 Identities = 40/82 (48%), Positives = 54/82 (65%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           R++EVP++QKLPS YLLDSI+KN+G +Y  YFA RL  +F + Y ++ P   PAM HLF 
Sbjct: 116 RVLEVPLDQKLPSLYLLDSIVKNIGREYVRYFAARLPKVFCEAYNQVHPSQYPAMRHLFG 175

Query: 182 TWGKYIPSFARDSIQEFLQKEP 247
           TW +  P      I++ LQ  P
Sbjct: 176 TWSQVFPLSVLRKIEDELQFSP 197



 Score = 34.7 bits (78), Expect(2) = 2e-18
 Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 240 KNHTPASSGDLRHSGSQSPHLLRG-HVNAKYLEAHHQMEHS 359
           KN   +    +R S S SP    G HVN KYLEA H  +HS
Sbjct: 199 KNSQSSGITSMRQSESPSPRPSHGIHVNPKYLEARHLFKHS 239


>gb|PPS20316.1| hypothetical protein GOBAR_AA00250 [Gossypium barbadense]
          Length = 1004

 Score = 88.2 bits (217), Expect = 7e-18
 Identities = 42/79 (53%), Positives = 54/79 (68%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F + Y++++P L PAM HLF 
Sbjct: 92  RIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFG 151

Query: 182 TWGKYIPSFARDSIQEFLQ 238
           TW    P      I+  LQ
Sbjct: 152 TWSTVFPPSVLGKIEMQLQ 170


>ref|XP_016683609.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X2 [Gossypium hirsutum]
          Length = 1004

 Score = 88.2 bits (217), Expect = 7e-18
 Identities = 42/79 (53%), Positives = 54/79 (68%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F + Y++++P L PAM HLF 
Sbjct: 92  RIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFG 151

Query: 182 TWGKYIPSFARDSIQEFLQ 238
           TW    P      I+  LQ
Sbjct: 152 TWSTVFPPSVLHKIEMQLQ 170


>ref|XP_016683608.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Gossypium hirsutum]
          Length = 1024

 Score = 88.2 bits (217), Expect = 7e-18
 Identities = 42/79 (53%), Positives = 54/79 (68%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F + Y++++P L PAM HLF 
Sbjct: 92  RIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFG 151

Query: 182 TWGKYIPSFARDSIQEFLQ 238
           TW    P      I+  LQ
Sbjct: 152 TWSTVFPPSVLHKIEMQLQ 170


>gb|PPD72215.1| hypothetical protein GOBAR_DD30889 [Gossypium barbadense]
          Length = 1030

 Score = 88.2 bits (217), Expect = 7e-18
 Identities = 42/79 (53%), Positives = 54/79 (68%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F + Y++++P L PAM HLF 
Sbjct: 92  RIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFG 151

Query: 182 TWGKYIPSFARDSIQEFLQ 238
           TW    P      I+  LQ
Sbjct: 152 TWSTVFPPSVLHKIEMQLQ 170


>ref|XP_020269462.1| LOW QUALITY PROTEIN: uncharacterized protein LOC109844760
           [Asparagus officinalis]
          Length = 1407

 Score = 82.8 bits (203), Expect(2) = 8e-18
 Identities = 40/79 (50%), Positives = 53/79 (67%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI+EVPV+QKLPS YLLDSI+KN+G +Y  YFA +L  +F + Y ++   + PAM HLF 
Sbjct: 485 RILEVPVDQKLPSLYLLDSIVKNIGREYVRYFATQLPKVFCEAYNQVHSNMHPAMRHLFG 544

Query: 182 TWGKYIPSFARDSIQEFLQ 238
           TW +  PS     I+  LQ
Sbjct: 545 TWSQVFPSSVLRKIENKLQ 563



 Score = 35.0 bits (79), Expect(2) = 8e-18
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +3

Query: 234 YKKNHTPASSG--DLRHSGSQSPHLLRG-HVNAKYLEAHHQMEHS 359
           +  N +  S G  ++R+S S SP    G HVN KYLEA  Q++HS
Sbjct: 564 FSTNESQRSVGQTNIRNSESPSPRPSHGIHVNPKYLEAQRQLQHS 608


>ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
           homolog 4-like [Phoenix dactylifera]
          Length = 1063

 Score = 84.3 bits (207), Expect(2) = 8e-18
 Identities = 41/85 (48%), Positives = 55/85 (64%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           R++EVP++QKLPS YLLDSI+KN+G +Y  YFA RL  +F + Y ++ P   PAM HLF 
Sbjct: 116 RVLEVPLDQKLPSLYLLDSIVKNIGREYMRYFAARLPKVFCEAYNQVHPNQYPAMRHLFG 175

Query: 182 TWGKYIPSFARDSIQEFLQKEPYTS 256
           TW +  P      I++ LQ  P  S
Sbjct: 176 TWFQVFPLSVLRKIEDELQFSPSKS 200



 Score = 33.5 bits (75), Expect(2) = 8e-18
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 240 KNHTPASSGDLRHSGSQSPHLLRG-HVNAKYLEAHHQMEHS 359
           K++  +    +R S S SP    G HVN KYLEA H  +HS
Sbjct: 199 KSNQSSGITSMRRSESPSPRPSHGIHVNPKYLEARHLFKHS 239


>gb|ONK65902.1| uncharacterized protein A4U43_C06F2150 [Asparagus officinalis]
          Length = 1031

 Score = 82.8 bits (203), Expect(2) = 8e-18
 Identities = 40/79 (50%), Positives = 53/79 (67%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI+EVPV+QKLPS YLLDSI+KN+G +Y  YFA +L  +F + Y ++   + PAM HLF 
Sbjct: 156 RILEVPVDQKLPSLYLLDSIVKNIGREYVRYFATQLPKVFCEAYNQVHSNMHPAMRHLFG 215

Query: 182 TWGKYIPSFARDSIQEFLQ 238
           TW +  PS     I+  LQ
Sbjct: 216 TWSQVFPSSVLRKIENKLQ 234



 Score = 35.0 bits (79), Expect(2) = 8e-18
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +3

Query: 234 YKKNHTPASSG--DLRHSGSQSPHLLRG-HVNAKYLEAHHQMEHS 359
           +  N +  S G  ++R+S S SP    G HVN KYLEA  Q++HS
Sbjct: 235 FSTNESQRSVGQTNIRNSESPSPRPSHGIHVNPKYLEAQRQLQHS 279


>gb|KJB67157.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 831

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/79 (53%), Positives = 54/79 (68%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F + Y++++P L PAM HLF 
Sbjct: 92  RIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFG 151

Query: 182 TWGKYIPSFARDSIQEFLQ 238
           TW    P      I+  LQ
Sbjct: 152 TWSTVFPPSVLRKIEMQLQ 170


>ref|XP_022036926.1| polyadenylation and cleavage factor homolog 4 [Helianthus annuus]
 ref|XP_022036927.1| polyadenylation and cleavage factor homolog 4 [Helianthus annuus]
 gb|OTG23823.1| putative PCF11P-similar protein 4 [Helianthus annuus]
          Length = 886

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 43/85 (50%), Positives = 55/85 (64%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI+EVPVEQKLPS YLLDSI+KN+G  Y  +F+ RL  +F   Y+++ P L P+M HLF 
Sbjct: 112 RIIEVPVEQKLPSLYLLDSIVKNIGRDYIRHFSARLPEVFCAAYRQVHPSLHPSMRHLFG 171

Query: 182 TWGKYIPSFARDSIQEFLQKEPYTS 256
           TW    PS     I+  LQ  P +S
Sbjct: 172 TWSTVFPSSVLRKIESQLQFSPSSS 196


>gb|KJB67159.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 980

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/79 (53%), Positives = 54/79 (68%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F + Y++++P L PAM HLF 
Sbjct: 68  RIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFG 127

Query: 182 TWGKYIPSFARDSIQEFLQ 238
           TW    P      I+  LQ
Sbjct: 128 TWSTVFPPSVLRKIEMQLQ 146


>ref|XP_017645983.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Gossypium arboreum]
          Length = 1001

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/79 (53%), Positives = 54/79 (68%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F + Y++++P L PAM HLF 
Sbjct: 92  RIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFG 151

Query: 182 TWGKYIPSFARDSIQEFLQ 238
           TW    P      I+  LQ
Sbjct: 152 TWSTVFPPSVLRKIEMQLQ 170


>ref|XP_012450329.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Gossypium raimondii]
          Length = 1001

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/79 (53%), Positives = 54/79 (68%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F + Y++++P L PAM HLF 
Sbjct: 92  RIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFG 151

Query: 182 TWGKYIPSFARDSIQEFLQ 238
           TW    P      I+  LQ
Sbjct: 152 TWSTVFPPSVLRKIEMQLQ 170


>gb|OMO76739.1| hypothetical protein CCACVL1_15454 [Corchorus capsularis]
          Length = 1003

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 43/79 (54%), Positives = 55/79 (69%)
 Frame = +2

Query: 2   RIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFR 181
           RIVEVPVEQKLPS YLLDSI+KN+G +Y  +F+ RL  +FI+ Y++++P L PAM HLF 
Sbjct: 90  RIVEVPVEQKLPSLYLLDSIVKNIGREYVRHFSSRLPEVFIEAYRQVNPNLYPAMRHLFG 149

Query: 182 TWGKYIPSFARDSIQEFLQ 238
           TW    P      I+  LQ
Sbjct: 150 TWSAVFPPSVLRKIETQLQ 168