BLASTX nr result

ID: Ophiopogon27_contig00032639 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00032639
         (476 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020254936.1| ALBINO3-like protein 2, chloroplastic isofor...    63   1e-08

>ref|XP_020254936.1| ALBINO3-like protein 2, chloroplastic isoform X1 [Asparagus
           officinalis]
 gb|ONK78731.1| uncharacterized protein A4U43_C02F21840 [Asparagus officinalis]
          Length = 580

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 52/152 (34%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
 Frame = -2

Query: 442 MGPTTKFXXXXXXXXXXXXXLYSSAALKNTSPLLPL-TTFSFNRRQXXXXXXXXXXXXXX 266
           MGPT K              L  + A++N + L PL +       +              
Sbjct: 1   MGPTAKLFRRHVLRRNRRRPLSPALAIQNPNRLPPLHSPVLLGGHRPSRNPNPSNLSPFR 60

Query: 265 XXSWIPWTRXXXXXXXXXXXXXXXXXSLDGSETAP-EESLNTGFVSSGILDDDEAKSSEI 89
             SWIPW+R                    GS+T+P +E    GF  S +L  DE KS++ 
Sbjct: 61  SFSWIPWSRSQKPDTGSETASEFSPTG--GSDTSPVKEPPELGFGGSEVLQGDELKSADT 118

Query: 88  GSGLSSVAGSDSGLVEV---SGLDQAWYAPFQ 2
           GSGLS V GSDSGL EV   S LD++WY+PFQ
Sbjct: 119 GSGLSWVTGSDSGL-EVPSDSSLDRSWYSPFQ 149


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