BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00032634
         (807 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   328   e-103
emb|CDP17738.1| unnamed protein product [Coffea canephora]            312   1e-97
gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus...   305   2e-96
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   297   3e-90
ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116...   273   1e-89
gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo...   267   6e-84
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   275   6e-83
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo...   267   5e-82
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...   268   1e-81
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]            270   2e-81
gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo...   265   2e-81
gb|KYP38720.1| Retrovirus-related Pol polyprotein from transposo...   254   2e-81
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   273   3e-80
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        271   8e-80
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     271   1e-79
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   271   2e-79
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         267   2e-79
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]                        267   2e-79
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     270   2e-79
emb|CAJ86192.1| H0306F03.15 [Oryza sativa]                            267   6e-79

>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  328 bits (840), Expect = e-103
 Identities = 150/246 (60%), Positives = 191/246 (77%), Gaps = 3/246 (1%)
 Frame = -3

Query: 730 EWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGVVRELTD 551
           EW+LDSG TYH+CP R+WF  F++LDGGVVYMGND+ C   GIG++K++ HDG  R L D
Sbjct: 223 EWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRD 282

Query: 550 VRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRGVREKNLYYLKGTTITGA 371
           VRYVP LKKNLISLG+LESKG  VT+  G LK   G++V+++GV + NLYY +G+T+ G 
Sbjct: 283 VRYVPKLKKNLISLGALESKGLVVTMRDGILKATLGALVMLKGVMKNNLYYYQGSTVVGT 342

Query: 370 QVGAVTS---DEDTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCVLGKKTM 200
              A +S   D +   L HMRLGHAGEKSLQ L +Q LLKG K C LEFCEHCVLGK+  
Sbjct: 343 VAAATSSSKKDAEAAKLWHMRLGHAGEKSLQILTKQGLLKGTKACKLEFCEHCVLGKQRR 402

Query: 199 VKFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVLE 20
           VKF T IH  +G+LDYVH+DVWGP+K  S+GG++YFV+FVDD+SRR WV+ +K+K+DVLE
Sbjct: 403 VKFGTAIHNTKGILDYVHSDVWGPAKTPSIGGRHYFVTFVDDFSRRVWVFTMKNKNDVLE 462

Query: 19  VFVEWK 2
           +F++WK
Sbjct: 463 IFLKWK 468


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  312 bits (800), Expect = 1e-97
 Identities = 150/265 (56%), Positives = 194/265 (73%), Gaps = 4/265 (1%)
 Frame = -3

Query: 784  DSVFSLALTPTVCAADSTEWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEG 605
            +S FSLA++      D  EW+LDS  TYH+ P REWF  FE+LDGG VYMGND+ C   G
Sbjct: 292  ESDFSLAVSRLTSHPD--EWILDSTCTYHMTPMREWFFEFEELDGGFVYMGNDNPCKTVG 349

Query: 604  IGTVKIQMHDGVVRELTDVRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMR 425
            IG++K++ HDG  R L DVRYVP LK++LISLG LESKG  V +  G LKV  G++++++
Sbjct: 350  IGSIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLESKGLEVRMRDGILKVTSGALLMLK 409

Query: 424  GVREKNLYYLKGTTITGAQVGAVTS----DEDTTWL*HMRLGHAGEKSLQTLARQDLLKG 257
            GVR+ NLYY +G+T+ G    A +S    D + T L HMRLG AGEKSLQ LA+Q LLKG
Sbjct: 410  GVRKNNLYYYQGSTVVGTAAVATSSSSKKDAEATKLWHMRLGDAGEKSLQNLAKQGLLKG 469

Query: 256  AKTCSLEFCEHCVLGKKTMVKFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFVD 77
             K C LEFCEHCVL K+  VKF T IH  +G+LDYVH+DVWGP+K  SLGG+ YFV+F+D
Sbjct: 470  TKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSDVWGPAKTPSLGGRYYFVTFID 529

Query: 76   DYSRRNWVYAIKHKSDVLEVFVEWK 2
            D+SRR WV+ +K K ++L++F++WK
Sbjct: 530  DFSRRVWVFTMKSKDEMLKIFLKWK 554


>gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus officinalis]
          Length = 631

 Score =  305 bits (780), Expect = 2e-96
 Identities = 152/267 (56%), Positives = 191/267 (71%)
 Frame = -3

Query: 802 KGNDSDDSVFSLALTPTVCAADSTEWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDH 623
           KG+DSDDS FSL +TP V   D  +WMLDSGATYHV PRR+WF+SFEK+DGGVV MGND 
Sbjct: 247 KGDDSDDSCFSLLITPEVNHVDVLDWMLDSGATYHVTPRRDWFASFEKVDGGVVVMGNDQ 306

Query: 622 ACSMEGIGTVKIQMHDGVVRELTDVRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKG 443
            CS+  IGTV+I+MHDGVVREL +VR+VP LKKN+IS+G+LE+K F+     GS ++   
Sbjct: 307 FCSVCWIGTVRIRMHDGVVRELKEVRFVPQLKKNIISVGALEAKRFK-----GSTEI--- 358

Query: 442 SMVVMRGVREKNLYYLKGTTITGAQVGAVTSDEDTTWL*HMRLGHAGEKSLQTLARQDLL 263
                                  +QV    S+ D + L H RLGH  E SLQ L +Q LL
Sbjct: 359 -----------------------SQVALAISEADISKLWHYRLGHTSENSLQILCKQRLL 395

Query: 262 KGAKTCSLEFCEHCVLGKKTMVKFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSF 83
           KGAK+  +EFCEHCVLGKKT VKF T+IH+ RG++DY+HTDVWG +K+ SLGG+++FV+F
Sbjct: 396 KGAKSGKIEFCEHCVLGKKTKVKFGTSIHQTRGIMDYMHTDVWGLTKNVSLGGQHWFVTF 455

Query: 82  VDDYSRRNWVYAIKHKSDVLEVFVEWK 2
           VDDYSR  WVY +  KS+VL++FVEWK
Sbjct: 456 VDDYSRHCWVYTMTKKSEVLDIFVEWK 482


>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1032

 Score =  297 bits (761), Expect = 3e-90
 Identities = 145/266 (54%), Positives = 194/266 (72%), Gaps = 4/266 (1%)
 Frame = -3

Query: 787 DDSVFSLALTPTVCAADSTEWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSME 608
           DDS  SLA++ +   + S+ W+LDSG + H+CP REWF  F +L+ GVVY  ND   +  
Sbjct: 55  DDSDCSLAVSGST--SSSSAWLLDSGCSNHMCPNREWFYDFRELEEGVVYTANDVPLTTH 112

Query: 607 GIGTVKIQMHDGVVRELTDVRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVM 428
           GIG+++++  DG +R L DVR+VP+L +NLIS+G+LE KGF V  E G +K++ G++VVM
Sbjct: 113 GIGSIRLKNRDGAIRTLKDVRFVPSLSRNLISVGALEEKGFTVHAEGGVMKIISGALVVM 172

Query: 427 RGVREKN-LYYLKGTTITGAQVGAVTSDE---DTTWL*HMRLGHAGEKSLQTLARQDLLK 260
           +GVR+ N LYY +GTTI G    A +SDE   ++  L HMRLGHAGE+SL  L +Q LLK
Sbjct: 173 KGVRKNNRLYYYQGTTIIGTAAVA-SSDEKELESAKLWHMRLGHAGERSLNLLMKQGLLK 231

Query: 259 GAKTCSLEFCEHCVLGKKTMVKFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFV 80
             + C L+FCEHCV GKKT VKF T IH  +G+LDYVH+DVWGPSK  SL G +Y+V+FV
Sbjct: 232 NIQACKLDFCEHCVKGKKTRVKFGTAIHDTKGILDYVHSDVWGPSKTASLAGNHYYVTFV 291

Query: 79  DDYSRRNWVYAIKHKSDVLEVFVEWK 2
           DD+SRR WVYA+K K +VL +F++WK
Sbjct: 292 DDFSRRIWVYAMKTKDEVLGIFLKWK 317


>ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116374, partial [Tarenaya
           hassleriana]
          Length = 209

 Score =  273 bits (699), Expect = 1e-89
 Identities = 127/208 (61%), Positives = 160/208 (76%), Gaps = 2/208 (0%)
 Frame = -3

Query: 721 LDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGVVRELTDVRY 542
           +DSG TYH+C  +EWF +FE+LDGGVVYMGN+ A    GIG+++++ HDG  R LT+VRY
Sbjct: 1   MDSGCTYHMCFNKEWFFNFEELDGGVVYMGNNDALQATGIGSIRLRCHDGTTRILTEVRY 60

Query: 541 VPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRGVREKNLYYLKGTTITG--AQ 368
           VP LKKNLISLG+LESKG+ VTI  G LKVV G++VV++GVR+ NLYY KG+T+ G  A 
Sbjct: 61  VPNLKKNLISLGTLESKGYTVTIRDGILKVVSGALVVLKGVRKNNLYYFKGSTVIGTVAV 120

Query: 367 VGAVTSDEDTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCVLGKKTMVKFS 188
                 D + T L HMRLGH GEK+LQ L +Q +LKGA+ C LEFCEHCVLGK++ VKF 
Sbjct: 121 TAGEDKDSEVTRLWHMRLGHPGEKALQNLVKQGVLKGARLCKLEFCEHCVLGKQSKVKFG 180

Query: 187 TTIHRIRGVLDYVHTDVWGPSKHTSLGG 104
           T IH   G+LDY+H+DVWGP++ TSLGG
Sbjct: 181 TAIHNTEGILDYIHSDVWGPTRETSLGG 208


>gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 448

 Score =  267 bits (683), Expect = 6e-84
 Identities = 121/245 (49%), Positives = 170/245 (69%), Gaps = 2/245 (0%)
 Frame = -3

Query: 730 EWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGVVRELTD 551
           +W+LDSG +YH+CP R WF ++E+  GG V+MGND  C   GIGT++++MHDGV+R LT+
Sbjct: 52  QWVLDSGCSYHMCPNRSWFLTYEERLGGRVFMGNDMPCKTVGIGTIQLRMHDGVIRTLTE 111

Query: 550 VRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRGVREKNLYYLKGTTITGA 371
           VR+VP LKKNLIS+G L+SKGF+  +++G +++ +GS VVMRG ++ NLY L+G+T + +
Sbjct: 112 VRHVPDLKKNLISVGVLDSKGFKCNVKNGVMEIKRGSTVVMRGFKKGNLYMLQGSTSSIS 171

Query: 370 QVGAVTSDE--DTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCVLGKKTMV 197
           +  +V      D T+L HMRLGH  E+ +  L+RQ LL       L FCEHCV GK+  +
Sbjct: 172 ESVSVAEKNIPDLTYLWHMRLGHMSERGMMILSRQQLLGNHTVKELRFCEHCVFGKQHRI 231

Query: 196 KFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVLEV 17
           KF    H  +  LDY+H+D WGPS+  SLGG  YF+S +DDYSR  W++  KHK+   + 
Sbjct: 232 KFPKAQHSTKSTLDYIHSDCWGPSQVPSLGGGRYFLSIIDDYSRMTWIFITKHKNQAFKC 291

Query: 16  FVEWK 2
           F EWK
Sbjct: 292 FKEWK 296


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  275 bits (703), Expect = 6e-83
 Identities = 128/211 (60%), Positives = 158/211 (74%), Gaps = 3/211 (1%)
 Frame = -3

Query: 730 EWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGVVRELTD 551
           EW+LDSG TYH+CP R+WF  F++LDGGVVYMGND+ C   GIG++K++ HDG  R L D
Sbjct: 224 EWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRD 283

Query: 550 VRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRGVREKNLYYLKGTTITGA 371
           VRYVP LKKNLISLG+LESKG  VT+  G LK   G++V+++GV + NLYY +G+T+ G 
Sbjct: 284 VRYVPKLKKNLISLGALESKGLVVTMRDGILKATSGALVMLKGVMKNNLYYYQGSTVVGT 343

Query: 370 QVGAVTS---DEDTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCVLGKKTM 200
              A +S   D + T L HMRLGHAGEKSLQ   +Q LLKG K C LEFCEHCVLGK+  
Sbjct: 344 VAAATSSSKKDAEATKLWHMRLGHAGEKSLQIFTKQGLLKGTKACKLEFCEHCVLGKQRR 403

Query: 199 VKFSTTIHRIRGVLDYVHTDVWGPSKHTSLG 107
           VKF T IH  +G+LDYVH+DVWGP+K  S+G
Sbjct: 404 VKFGTAIHNTKGILDYVHSDVWGPAKTPSIG 434


>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 609

 Score =  267 bits (682), Expect = 5e-82
 Identities = 124/245 (50%), Positives = 168/245 (68%), Gaps = 2/245 (0%)
 Frame = -3

Query: 730 EWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGVVRELTD 551
           +W+LDSG +YH+CP R WF ++EK  GG V+MGND AC   GIGT++I+MHDGV+R LT+
Sbjct: 213 QWVLDSGCSYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMHDGVIRTLTE 272

Query: 550 VRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRGVREKNLYYLKGTT--IT 377
           VR+VP LKKNLIS+G L +KGF+  +E G +++ KGS VV+RG+++ NLY L+G+T  I+
Sbjct: 273 VRHVPDLKKNLISVGVLHTKGFKCNVEGGVMEISKGSTVVIRGIKKGNLYMLQGSTNLIS 332

Query: 376 GAQVGAVTSDEDTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCVLGKKTMV 197
            +   A     D T L HMRLGH  E+ +  L +Q LL       L+FCEHCV+GK   +
Sbjct: 333 ESVSVADKHTPDLTHLWHMRLGHMSERGMMVLRKQKLLGDHTVKELKFCEHCVVGKHHRI 392

Query: 196 KFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVLEV 17
           KF    H  +  LDYVH+D WGPS+  SLGG  YF+S +DDYS   W++ +KHK+   + 
Sbjct: 393 KFPKAQHTTKSTLDYVHSDCWGPSRVPSLGGGRYFLSIIDDYSGMTWIFIMKHKNQAFKY 452

Query: 16  FVEWK 2
           F EWK
Sbjct: 453 FKEWK 457


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 690

 Score =  268 bits (685), Expect = 1e-81
 Identities = 126/266 (47%), Positives = 181/266 (68%), Gaps = 1/266 (0%)
 Frame = -3

Query: 796  NDSDDSVFSLALTPTVCAADSTEWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHAC 617
            N   DS   + ++ +      TEW+LDSG T+H+CP ++ F++ E +D GVV MGND  C
Sbjct: 264  NVETDSDGDVMISVSSDKRSKTEWILDSGCTFHMCPYKDLFTTLEPVDSGVVLMGNDTQC 323

Query: 616  SMEGIGTVKIQMHDGVVRELTDVRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSM 437
             + GIGT++I+ HDG ++ L++VR++P LK+NLISLG+LES G + + E G LKV KG++
Sbjct: 324  KIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVSKGAI 383

Query: 436  VVMRGVREKNLYYLKGTTITG-AQVGAVTSDEDTTWL*HMRLGHAGEKSLQTLARQDLLK 260
            V+++  R  +LY L+G+ +TG A V +  SD+D T L HMRLGH  EK +  L++Q LL 
Sbjct: 384  VLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLSKQGLLG 443

Query: 259  GAKTCSLEFCEHCVLGKKTMVKFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFV 80
                  LEFCEHCV GK+  V FST  HR +G LDY+H+D+WGPSK  S GG  Y ++ +
Sbjct: 444  NQGIGKLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHSDLWGPSKVPSYGGCRYMMTII 503

Query: 79   DDYSRRNWVYAIKHKSDVLEVFVEWK 2
            DD+SR+ WVY ++HK++    F +WK
Sbjct: 504  DDFSRKVWVYFLRHKNETFPTFKKWK 529


>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
          Length = 778

 Score =  270 bits (689), Expect = 2e-81
 Identities = 126/252 (50%), Positives = 174/252 (69%), Gaps = 3/252 (1%)
 Frame = -3

Query: 748  CAADSTEWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGV 569
            CA  S +W+LD+  TYH+CP R+WF+++E + GG V MG+D  C + GIGTV+I+M DG 
Sbjct: 259  CAQTSDQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGC 318

Query: 568  VRELTDVRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRG-VREKNLYYLK 392
            +R L+DVR++P LK++LIS  +L+ KG++ +   G LKV KGS+VVM+  ++  NLY+L+
Sbjct: 319  IRTLSDVRHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLR 378

Query: 391  GTTITG--AQVGAVTSDEDTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCV 218
            GTTI G  A V    S+ D T L HMRLGH  E  L  L+++ LL G     L+FCEHC+
Sbjct: 379  GTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCI 438

Query: 217  LGKKTMVKFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKH 38
             GK   VKF+T+ H   G+LDYVH+D+WGP++ TS GG  Y ++ VDDYSR+ W Y +KH
Sbjct: 439  FGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKH 498

Query: 37   KSDVLEVFVEWK 2
            K    +VF EWK
Sbjct: 499  KYQAFDVFKEWK 510


>gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 593

 Score =  265 bits (677), Expect = 2e-81
 Identities = 122/245 (49%), Positives = 170/245 (69%), Gaps = 2/245 (0%)
 Frame = -3

Query: 730 EWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGVVRELTD 551
           +W+LDSG +YH+CP R WF ++EK  GG V+MGND AC    IGT++I+MHDGV+R LT+
Sbjct: 265 QWVLDSGCSYHMCPNRSWFLTYEKKFGGDVFMGNDMACKTISIGTIQIKMHDGVIRTLTE 324

Query: 550 VRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRGVREKNLYYLKGTTITGA 371
           VR+VP LKKNLIS+G L++KGF+  +E G +++ KGS +V+RG+++ NLY L+G+T   +
Sbjct: 325 VRHVPDLKKNLISVGVLDTKGFKCNVEGGVMEINKGSTIVIRGIKKGNLYMLQGSTNLIS 384

Query: 370 QVGAVTSDE--DTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCVLGKKTMV 197
           +  +V      D T L HMRLGH  E+ +  L++Q LL+      L+FCEHCVLGK    
Sbjct: 385 ESISVADKHTLDLTRLWHMRLGHMSERGMMVLSKQKLLRDHTVKELKFCEHCVLGKHHRS 444

Query: 196 KFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVLEV 17
           KF    H  +  LDYVH++ WGPS+  SLGG  YF+S +DDYSR  W++ +KHK+   + 
Sbjct: 445 KFPKAQHTTKSTLDYVHSNCWGPSRVPSLGGGRYFLSIIDDYSRMTWIFIMKHKNQAFKY 504

Query: 16  FVEWK 2
           F EWK
Sbjct: 505 FKEWK 509


>gb|KYP38720.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 242

 Score =  254 bits (648), Expect = 2e-81
 Identities = 119/242 (49%), Positives = 167/242 (69%), Gaps = 2/242 (0%)
 Frame = -3

Query: 727 WMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGVVRELTDV 548
           W+LDSG +YH+CP R WF ++EK  GG V+MGND AC   GI T++I+MHDGV+R LT+V
Sbjct: 1   WVLDSGCSYHMCPIRSWFLTYEKKSGGDVFMGNDMACKTIGIRTIQIKMHDGVIRTLTEV 60

Query: 547 RYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRGVREKNLYYLKGTTITGAQ 368
           R+VP LKKNLIS+G L++KGF+  +E  ++++ KGS+VV+RG+ + NLY L+G+T + ++
Sbjct: 61  RHVPDLKKNLISVGVLDTKGFKCNVEGEAMEISKGSIVVIRGINKGNLYMLQGSTNSISE 120

Query: 367 VGAVTSDE--DTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCVLGKKTMVK 194
             +VT     D T L +M LGH  E+ +  L++Q LL       L+FCEHCV GK   +K
Sbjct: 121 SISVTDKHTPDLTHLWYMLLGHMSERGMMVLSKQQLLGDHIIKELKFCEHCVFGKYHRIK 180

Query: 193 FSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVLEVF 14
           F    H  +  LDYVH+D WGPS+  SLGG  YF+S +DDYSR  W++ +KHK+   + F
Sbjct: 181 FPKAQHTTKSTLDYVHSDCWGPSRVPSLGGGRYFLSIIDDYSRMTWIFIMKHKNQAFKYF 240

Query: 13  VE 8
            E
Sbjct: 241 KE 242


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  273 bits (697), Expect = 3e-80
 Identities = 130/266 (48%), Positives = 179/266 (67%), Gaps = 2/266 (0%)
 Frame = -3

Query: 793  DSDDSVFSLALTPTVCAADSTEWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACS 614
            +  +S   +AL        S  W+LDSGA+YH+CPRREWF+++E++DGG + M N   C 
Sbjct: 257  EDTNSEEDIALVADEHTHHSDVWVLDSGASYHICPRREWFTTYEQVDGGSISMANSSVCK 316

Query: 613  MEGIGTVKIQMHDGVVRELTDVRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMV 434
            + G G++KI+ HDG    L +VR+VP + KNLISL  L+SKGF  + + G L+V KGS +
Sbjct: 317  VVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDSKGFSWSGKDGVLRVWKGSNL 376

Query: 433  VMRGVREKNLYYLKGTTITGAQVGAVTS--DEDTTWL*HMRLGHAGEKSLQTLARQDLLK 260
            +++GV    LY+L+G+T+TG+   A +    +D T L H+RLGH GE+ +Q L+++DLL 
Sbjct: 377  ILKGVMRGTLYFLQGSTVTGSAHVASSEFHQKDMTKLWHIRLGHMGERGMQILSKEDLLA 436

Query: 259  GAKTCSLEFCEHCVLGKKTMVKFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFV 80
            G K  SLEFCEHCV GK    KF   IHR +G LDY+H+D WGP +  SLGG  +FVS +
Sbjct: 437  GHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWGPCRVESLGGCRFFVSII 496

Query: 79   DDYSRRNWVYAIKHKSDVLEVFVEWK 2
            DDYSR  WVY +KHKS+  + F EWK
Sbjct: 497  DDYSRMTWVYMMKHKSEAFQKFKEWK 522


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  271 bits (692), Expect = 8e-80
 Identities = 127/252 (50%), Positives = 174/252 (69%), Gaps = 3/252 (1%)
 Frame = -3

Query: 748  CAADSTEWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGV 569
            CA  S +W+LD+  TYH+CP R+WF+++E + GG V MG+D  C + GIGTV+I+M DG 
Sbjct: 293  CAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGC 352

Query: 568  VRELTDVRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRG-VREKNLYYLK 392
            +R L+DVR++P LK++LISL +L+ KG++ +   G LKV KGS+VVM+  ++  NLY+L+
Sbjct: 353  IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQ 412

Query: 391  GTTITG--AQVGAVTSDEDTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCV 218
            GTTI G  A V    S+ D T L HMRLGH  E  L  L+++ LL G     L+FCEHC+
Sbjct: 413  GTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCI 472

Query: 217  LGKKTMVKFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKH 38
             GK   VKF+T+ H   G+LDYVH+D+WGP++ TS GG  Y ++ VDDYSR+ W Y +KH
Sbjct: 473  FGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKH 532

Query: 37   KSDVLEVFVEWK 2
            K     VF EWK
Sbjct: 533  KYQAFNVFKEWK 544


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  271 bits (692), Expect = 1e-79
 Identities = 128/252 (50%), Positives = 175/252 (69%), Gaps = 3/252 (1%)
 Frame = -3

Query: 748  CAADSTEWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGV 569
            CA  S +W+LD+  TYH+CP R+WF+++E L GG V MG+D  C + GIGTV+I+M DG 
Sbjct: 328  CAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGY 387

Query: 568  VRELTDVRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRG-VREKNLYYLK 392
            +R L+DVR++P LK++LISL +L+ KG++ +   G LKV KGS+VVM+  ++  NLY+L+
Sbjct: 388  IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLR 447

Query: 391  GTTITG--AQVGAVTSDEDTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCV 218
            GTTI G  A V    S+ D T L HMRLGH  E  L  L++++LL G     L+FCEHC+
Sbjct: 448  GTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCI 507

Query: 217  LGKKTMVKFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKH 38
             GK   VKF+T+ H   G+LDYVH+D+WGP+  TS GG  Y ++ VDDYSR+ W Y +KH
Sbjct: 508  FGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKH 567

Query: 37   KSDVLEVFVEWK 2
            K    +VF EWK
Sbjct: 568  KYQAFDVFKEWK 579


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  271 bits (692), Expect = 2e-79
 Identities = 128/252 (50%), Positives = 175/252 (69%), Gaps = 3/252 (1%)
 Frame = -3

Query: 748  CAADSTEWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGV 569
            CA  S +W+LD+  TYH+CP R+WF+++E L GG V MG+D  C + GIGTV+I+M DG 
Sbjct: 328  CAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGY 387

Query: 568  VRELTDVRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRG-VREKNLYYLK 392
            +R L+DVR++P LK++LISL +L+ KG++ +   G LKV KGS+VVM+  ++  NLY+L+
Sbjct: 388  IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLR 447

Query: 391  GTTITG--AQVGAVTSDEDTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCV 218
            GTTI G  A V    S+ D T L HMRLGH  E  L  L++++LL G     L+FCEHC+
Sbjct: 448  GTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCI 507

Query: 217  LGKKTMVKFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKH 38
             GK   VKF+T+ H   G+LDYVH+D+WGP+  TS GG  Y ++ VDDYSR+ W Y +KH
Sbjct: 508  FGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKH 567

Query: 37   KSDVLEVFVEWK 2
            K    +VF EWK
Sbjct: 568  KYQAFDVFKEWK 579


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  267 bits (682), Expect = 2e-79
 Identities = 125/252 (49%), Positives = 173/252 (68%), Gaps = 3/252 (1%)
 Frame = -3

Query: 748 CAADSTEWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGV 569
           CA  S +W+LD+  TYH+CP R+WF+++E + GG V MG+D  C + GIG V+I+M DG 
Sbjct: 125 CAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGC 184

Query: 568 VRELTDVRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRG-VREKNLYYLK 392
           +  L+DVR++P LK++LISL +L+ KG++ +   G LKV KGS+VVM+  ++  NLY+L+
Sbjct: 185 ISTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLR 244

Query: 391 GTTITG--AQVGAVTSDEDTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCV 218
           GTTI G  A V    S+ D T L HMRLGH  E  L  L+++ LL G     L+FCEHC+
Sbjct: 245 GTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCI 304

Query: 217 LGKKTMVKFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKH 38
            GK   VKF+T+ H   G+LDYVH+D+WGP++ TS GG  Y ++ VDDYSR+ W Y +KH
Sbjct: 305 FGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKH 364

Query: 37  KSDVLEVFVEWK 2
           K    +VF EWK
Sbjct: 365 KYQAFDVFKEWK 376


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]
          Length = 944

 Score =  267 bits (682), Expect = 2e-79
 Identities = 125/252 (49%), Positives = 173/252 (68%), Gaps = 3/252 (1%)
 Frame = -3

Query: 748 CAADSTEWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGV 569
           CA  S +W+LD+  TYH+CP R+WF+++E + GG V MG+D  C + GIG V+I+M DG 
Sbjct: 125 CAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGC 184

Query: 568 VRELTDVRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRG-VREKNLYYLK 392
           +  L+DVR++P LK++LISL +L+ KG++ +   G LKV KGS+VVM+  ++  NLY+L+
Sbjct: 185 ISTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLR 244

Query: 391 GTTITG--AQVGAVTSDEDTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCV 218
           GTTI G  A V    S+ D T L HMRLGH  E  L  L+++ LL G     L+FCEHC+
Sbjct: 245 GTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCI 304

Query: 217 LGKKTMVKFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKH 38
            GK   VKF+T+ H   G+LDYVH+D+WGP++ TS GG  Y ++ VDDYSR+ W Y +KH
Sbjct: 305 FGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKH 364

Query: 37  KSDVLEVFVEWK 2
           K    +VF EWK
Sbjct: 365 KYQAFDVFKEWK 376


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  270 bits (690), Expect = 2e-79
 Identities = 127/252 (50%), Positives = 174/252 (69%), Gaps = 3/252 (1%)
 Frame = -3

Query: 748 CAADSTEWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGV 569
           CA  S +W+LD+  TYH+CP R+WF+++E + GG V MG+D  C + GIGTV+I+M DG 
Sbjct: 202 CAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGC 261

Query: 568 VRELTDVRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRG-VREKNLYYLK 392
           +R L DVR++P LK++LISL +L+ KG++ +   G LKV KGS+VVM+  ++  NLY+L+
Sbjct: 262 IRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLR 321

Query: 391 GTTITG--AQVGAVTSDEDTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCV 218
           GTTI G  A V    S+ D T L HMRLGH  E  L  L+++ LL G     L+FCEHC+
Sbjct: 322 GTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCI 381

Query: 217 LGKKTMVKFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKH 38
            GK   VKF+T+ H   G+LDYVH+D+WGP++ TS GG  Y ++ VDDYSR+ W Y +KH
Sbjct: 382 FGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKH 441

Query: 37  KSDVLEVFVEWK 2
           K    +VF EWK
Sbjct: 442 KYQAFDVFKEWK 453


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa]
          Length = 1037

 Score =  267 bits (682), Expect = 6e-79
 Identities = 126/252 (50%), Positives = 173/252 (68%), Gaps = 3/252 (1%)
 Frame = -3

Query: 748 CAADSTEWMLDSGATYHVCPRREWFSSFEKLDGGVVYMGNDHACSMEGIGTVKIQMHDGV 569
           CA  S +W+LD+  TYH+CP R+WF+++E + GG V MG+D  C + GIGTV+I+M DG 
Sbjct: 110 CAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGC 169

Query: 568 VRELTDVRYVPALKKNLISLGSLESKGFRVTIESGSLKVVKGSMVVMRG-VREKNLYYLK 392
           +R L+DVR++P LK++LISL +L+ KG++ +   G LKV KGS+VVM+  ++  NLY+L+
Sbjct: 170 IRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQ 229

Query: 391 GTTITG--AQVGAVTSDEDTTWL*HMRLGHAGEKSLQTLARQDLLKGAKTCSLEFCEHCV 218
           GTTI G  A V    S+ D T L HMRLGH  E  L  L+ + LL G     L+FCEHC+
Sbjct: 230 GTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCI 289

Query: 217 LGKKTMVKFSTTIHRIRGVLDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKH 38
            GK   VKF+T+ H   G+LDYVH+D+WGP++ TS GG  Y ++ V+DYSR+ W Y +KH
Sbjct: 290 FGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPYFLKH 349

Query: 37  KSDVLEVFVEWK 2
           K     VF EWK
Sbjct: 350 KYQAFNVFKEWK 361